Factsheet for TraesCS1B01G293900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

peroxisome 1
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G283600.1	Wheat	cytosol, peroxisome, plasma membrane	97.16	97.04
TraesCS1A01G284600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	92.83	94.82
Zm00001d029861_P002	Maize	plastid	67.12	71.92
OQU92169	Sorghum	peroxisome, plastid	73.92	71.45
GSMUA_Achr9P07100_001	Banana	mitochondrion, plasma membrane	46.48	67.63
KRH56816	Soybean	plastid	48.58	47.93
KRH03132	Soybean	plastid	48.21	47.5
TraesCS1B01G295100.1	Wheat	plasma membrane	33.25	39.39
TraesCS3B01G386600.1	Wheat	cytosol	39.8	37.88
TraesCS4B01G358800.1	Wheat	cytosol	38.44	36.72
TraesCS3B01G314000.2	Wheat	mitochondrion	41.04	35.17
TraesCS1B01G300000.2	Wheat	mitochondrion	38.57	35.06
TraesCS4B01G327800.2	Wheat	cytosol	39.68	35.01
TraesCS3B01G212900.5	Wheat	cytosol	38.81	34.89
TraesCS5B01G099700.1	Wheat	cytosol	37.58	34.82
TraesCS5B01G299000.1	Wheat	cytosol	39.06	34.42
TraesCS1B01G362200.1	Wheat	mitochondrion	40.42	33.64
TraesCS6B01G205000.1	Wheat	mitochondrion	39.31	33.23
TraesCS1B01G295300.1	Wheat	cytosol	34.61	32.86
TraesCS5B01G212100.1	Wheat	mitochondrion	39.8	32.69
TraesCS1B01G295200.1	Wheat	cytosol	36.22	23.96
TraesCS2B01G414300.1	Wheat	plasma membrane	13.97	15.63
TraesCS2B01G329600.1	Wheat	plasma membrane	14.22	15.39

Protein Annotations

MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd
InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0055114	InterPro:IPR017927	PFAM:PF01794
PFAM:PF08022	PFAM:PF08030	PRINTS:PR00466	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF127
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G293900	EnsemblPlants:TraesCS1B01G293900.1
TIGR:cd06186	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:511967364..511972684

Molecular Weight (calculated)

90529.0 Da

IEP (calculated)

7.854

GRAVY (calculated)

-0.063

Length

809 amino acids

Sequence
(BLAST)

001: MTRVPDIQST PPMSQLHDEF LQVPIICSES PVMIQFVSNP GVGSSSDALS ASLSACPSGR SASEVEIEVL FHDADGYVYD DGFCTTLPAS AFLGCDGDSE
101: DVEAGGATTG LLRGPSPGME FVERDGKGEL KWSEMEGRFG RSSSAHGDTA GENESASSAK EPVLVNQNSN PKRSISRSSS HGIRIALDSC ERNSSSNLTE
201: KDIKQAIMFS ASLNKLSLSQ DEATEYTHLI LEEIQTGQGL AKLSGTRKGT LNDLQPTCWS TPIPTKHIQC MTSAAIVFFR AHWRRIWVIV MWLVACAALF
301: TWKFMQYRQR LAFEVMGYCL PTAKGAAETL KFNMAIVLLP VCRNTITWLR RSRSINSVIP FNDNINFHKL VAAGIVIGII LHGGTHLSCD IPRIAMADKT
401: IFGRTIAGDF GYHQPSYMEI VTSIEGTTGI AMVVLMLIAF LLASRPSRRN PGSLPPLVRQ MAGFNAFWYS HHLFIVVYVL LIVHSMFLFL AKDVSEKTTW
501: VYVVIPVMIY FGERIFRMVR SMAYESKILD AITYPGKVLS LKMTKPPGFR YQSGMYVFVQ CPQVSKFEWH PFSLTSAPDD DHLSIHIRSL GDWSYHVYDM
601: FHEALRCSNL DLPKVYIDGP YGAASQDHSK YEIILLIGLG IGATPFISVL KDIANGLDKE GCAANHHSAN GLRKAYFYWV TREQGSFEWF RDIMREVSAQ
701: DSKQGVVEMY NYLTSVYQEG DKRSVLISAI QALHFARHGI DIISKTPVRT HFSRPNWPRV FHGLARKHIG ERIGVFYCGP DDLGRQLERL CHKMNMRTFT
801: KFVFHKEHF

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.