Factsheet for TraesCS4B01G358800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G352200.3	Wheat	cytosol	99.06	99.06
TraesCS5A01G527600.1	Wheat	cytosol	98.58	98.58
HORVU4Hr1G086500.1	Barley	cytosol	95.16	95.38
TraesCS3B01G212900.5	Wheat	cytosol	89.96	84.67
Os01t0360200-01	Rice	plasma membrane	85.95	80.44
Zm00001d009248_P002	Maize	cytosol	84.3	79.6
Zm00001d040805_P003	Maize	cytosol	84.18	79.31
OQU86843	Sorghum	cytosol	84.77	77.71
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	65.29	66.31
CDY22644	Canola	plasma membrane	44.63	65.62
CDY65632	Canola	nucleus, peroxisome	11.1	65.28
KRH33894	Soybean	cytosol	63.16	64.85
Solyc01g099620.2.1	Tomato	cytosol	63.16	61.85
PGSC0003DMT400063688	Potato	cytosol	63.28	61.82
KRH68525	Soybean	cytosol	64.34	61.58
KRG96816	Soybean	cytosol	64.23	61.33
KRG92895	Soybean	extracellular, mitochondrion	64.23	61.19
VIT_14s0060g02320.t01	Wine grape	cytosol	64.34	60.96
TraesCS5B01G099700.1	Wheat	cytosol	62.22	60.37
AT1G09090.2	Thale cress	cytosol	58.8	59.07
Bra031658.1-P	Field mustard	cytosol	58.68	58.75
CDY06348	Canola	cytosol	55.61	57.72
TraesCS4B01G327800.2	Wheat	cytosol	61.75	57.03
TraesCS5B01G299000.1	Wheat	cytosol	61.04	56.32
TraesCS1B01G295100.1	Wheat	plasma membrane	44.86	55.64
TraesCS1B01G295300.1	Wheat	cytosol	49.0	48.71
TraesCS3B01G314000.2	Wheat	mitochondrion	53.84	48.31
TraesCS3B01G386600.1	Wheat	cytosol	48.05	47.88
TraesCS1B01G362200.1	Wheat	mitochondrion	53.96	47.02
TraesCS1B01G300000.2	Wheat	mitochondrion	48.76	46.4
TraesCS6B01G205000.1	Wheat	mitochondrion	50.18	44.41
TraesCS5B01G212100.1	Wheat	mitochondrion	51.12	43.96
TraesCS1B01G293900.1	Wheat	cytosol, peroxisome, plasma membrane	36.72	38.44
TraesCS1B01G295200.1	Wheat	cytosol	51.24	35.49
TraesCS2B01G414300.1	Wheat	plasma membrane	14.17	16.6
TraesCS2B01G329600.1	Wheat	plasma membrane	14.17	16.06

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	ncoils:Coil	InterPro:Cyt_b245_heavy_chain
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom
InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016174	GO:GO:0016491
GO:GO:0050664	GO:GO:0055114	InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794
PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222
PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF57	InterPro:RBOHB	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473
SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G358800	EnsemblPlants:TraesCS4B01G358800.1	TIGR:cd00051
TIGR:cd06186	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:649471110..649475119

Molecular Weight (calculated)

95335.8 Da

IEP (calculated)

9.494

GRAVY (calculated)

-0.148

Length

847 amino acids

Sequence
(BLAST)

001: MADIEAGGKP ATESDTATLI PNSGNLEGSS RATKTCRFKD NDELVEITLD VQRDSASVQA VRPVAAEAAV AAARKRYDRS KSTAAVALKG LQFVTAKVGT
101: DGWAAVEKRF NHLQVDGVLL RSRFGKCIGM DGSDEFAVQM FDALARKRGI VKEVLTKPEL KEFWEQLSDQ GFDNRLQTFI DMVDKNADGR ITVEEVKEII
201: ALSASANKLS KIKERADEYA ALIMEELDPK NLGYIELESL ESLLLQTPSE AVARSTITHS SKLSKALSMR LAPSKDTSPI RHYWLQFTFF VEENWKRIWV
301: AALWISICIA LFIWKFIQYR NRAVFNIMGY CVATAKGAAE TLKFNMALVL FPVCRNTITW IRSKTKIGAV VPFNDNINFH KVIAAGVAVG VVLHAGAHLT
401: CDFPLLLHAS DAKYEPMKPF FGETRPPNYW WFVKGTAGWT GIVMVVLMSI SFVLAQPWFR RNKLKDSNPL KKMTGFNAFW FTHHLFAIVY ALLIVHGTSL
501: YLTKEWYKKT TWMYIAYPVF LYSCERIVRL FRRHDSVKIQ KVAVYPGNVL ALYMSKPPGF KYRSGQYIFI NCGAVSPYEW HPFSVTSAPG DNYLSVHIRT
601: RGDWTSRLRT VFSEACRPPT EGESGLLRAD LSVGITDSNA RFPKLMIDGP YGAPAQDYRE YDVLLLIGLG IGATPLISIV KDVLNHIQRG ESVGGTEPDG
701: SGKAKKKPFM TKRAYSYWVT REEGSFEWFR GVMNEVAEKD KDGVIELHNH CSSVYQEGDA RSALIVMLQE LNHAKKGVDI LSGTSVKTHF ARPNWRSVFK
801: RIAVNHENQR VGVFYCGEPV LVAQLRQLSA DFTHNTNTKF DFHKENF

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.