Factsheet for TraesCS1B01G295100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, peroxisome, secretory
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G285700.1	Wheat	cytosol	93.41	68.31
GSMUA_Achr6P11760_001	Banana	golgi	38.8	64.95
TraesCS1D01G284800.1	Wheat	plastid	92.68	63.36
HORVU1Hr1G072160.5	Barley	cytosol	86.24	62.99
Os11t0537400-01	Rice	plasma membrane	3.95	61.36
TraesCS1B01G295300.1	Wheat	cytosol	68.08	54.58
TraesCS4B01G327800.2	Wheat	cytosol	70.57	52.56
TraesCS5B01G299000.1	Wheat	cytosol	68.52	50.98
GSMUA_Achr6P16270_001	Banana	cytosol	60.76	48.2
Zm00001d052653_P003	Maize	cytosol, plastid	67.79	47.68
Zm00001d007430_P002	Maize	cytosol	57.25	47.57
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	57.54	47.12
GSMUA_Achr10P...	Banana	cytosol	60.91	45.27
Zm00001d007421_P004	Maize	cytosol	62.66	45.15
TraesCS4B01G358800.1	Wheat	cytosol	55.64	44.86
Solyc06g068680.2.1	Tomato	cytosol	55.05	43.87
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	58.71	43.54
Bra037520.1-P	Field mustard	cytosol	58.42	43.28
KRH41026	Soybean	mitochondrion	55.78	42.91
TraesCS3B01G212900.5	Wheat	cytosol	56.52	42.89
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	57.83	42.89
VIT_19s0014g02830.t01	Wine grape	cytosol	52.71	42.86
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	51.98	42.62
AT4G25090.1	Thale cress	cytosol	52.86	42.52
OQU83587	Sorghum	plastid	67.06	42.45
AT5G51060.1	Thale cress	cytosol	56.22	42.43
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	57.39	42.42
Bra029194.1-P	Field mustard	cytosol	55.93	41.98
TraesCS5B01G099700.1	Wheat	cytosol	53.59	41.92
KRH63901	Soybean	cytosol, nucleus, plasma membrane	56.95	41.92
KRH59706	Soybean	cytosol	55.05	41.87
Zm00001d007426_P001	Maize	cytosol, plastid	60.47	41.51
VIT_01s0150g00450.t01	Wine grape	cytosol	56.08	41.5
AT5G07390.1	Thale cress	cytosol	54.61	41.35
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	50.22	41.18
KRH54051	Soybean	cytosol, nucleus, plasma membrane	56.52	41.02
Bra009266.1-P	Field mustard	cytosol	54.17	41.02
Solyc03g117980.2.1	Tomato	nucleus	55.34	40.3
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	55.34	40.3
TraesCS1B01G295200.1	Wheat	cytosol	69.55	38.84
TraesCS3B01G386600.1	Wheat	cytosol	47.44	38.12
TraesCS1B01G300000.2	Wheat	mitochondrion	47.58	36.52
TraesCS3B01G314000.2	Wheat	mitochondrion	49.93	36.12
TraesCS1B01G362200.1	Wheat	mitochondrion	50.51	35.49
TraesCS5B01G212100.1	Wheat	mitochondrion	48.32	33.5
TraesCS1B01G293900.1	Wheat	cytosol, peroxisome, plasma membrane	39.39	33.25
Bra011911.1-P	Field mustard	cytosol	31.33	33.23
TraesCS6B01G205000.1	Wheat	mitochondrion	46.12	32.92
GSMUA_Achr6P11770_001	Banana	cytosol	18.89	32.09
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	7.91	25.35
TraesCS2B01G414300.1	Wheat	plasma membrane	16.25	15.35
TraesCS2B01G329600.1	Wheat	plasma membrane	16.69	15.26
Bra013862.1-P	Field mustard	cytosol	2.34	6.18
CDY22645	Canola	cytosol	1.9	5.75

Protein Annotations

MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd
InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0055114	InterPro:IPR017927	PFAM:PF01794
PFAM:PF08022	PFAM:PF08030	PRINTS:PR00466	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G295100	EnsemblPlants:TraesCS1B01G295100.1
TIGR:cd06186	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:512987231..512993506

Molecular Weight (calculated)

78277.2 Da

IEP (calculated)

9.805

GRAVY (calculated)

-0.173

Length

683 amino acids

Sequence
(BLAST)

001: MLIITLSVSA NKLMMVPRQC KEYARLIMEA LDPDKLGYIE LHNLKMLLLE APSESTSNNH KLSKLLSQRL RPTTDPSPVR RWYKRAKCSL EDNWRRCWVM
101: LLWLSICVGL FAWKFVQYRH HAVFEVMGYC VCVAKGGAET LKFNMALTLL PVCRNTVTWL RSHTTAGRIV PFNDNLKFHM AIAVGITVGA GLHIISHLAC
201: DFPRLLHAMD DEYEPMKPFF GDAKPPNYWW FVRGTEGWTG LVMLALMVVA FTFATGPLRK GKLHLPKLKQ LESLDSNPEP RELTRFARLV NASRSRLTWL
301: VNTLLNRFTG YNVFWYTHHL FLAVYALLIV HGHFLYLTKK WQKKSTWMYL TVPMIVYACE RLTRTLRSSV RSVKKVRVAV HPHPATLLSL HLSKPQGFRY
401: KSGQYIYVKC PDVSPFQWHP FSITSAPEDN YVSVHIKTLG DWTNQLRNAF LKVCPTPTEG TTEILRAEFN REDAMTNPSL PKVLIDGPYG APAQDYKEYD
501: IVLLVGLGIG ATPMISIIKD IITNAKRLDG DVESGNGHAG DASPFRTRRA YFYWVTREQG SLEWFREVMD EVAEADEKRI IELHNHCTSV YEKGDARSAL
601: IAMLQSLHYA KNGVDVVSGS RVMTHFGRPN WTQVYQRIAD ENKETRVGVF YCGEPVLTNK LRGLAKKFTR KSSTKFEFHS ENF

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.