Factsheet for Zm00001d007421_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007430_P002	Maize	cytosol	67.93	78.35
Zm00001d007426_P001	Maize	cytosol, plastid	81.75	77.89
Zm00001d052653_P003	Maize	cytosol, plastid	75.63	73.84
GSMUA_Achr6P11760_001	Banana	golgi	31.12	72.3
TraesCS4B01G327800.2	Wheat	cytosol	69.41	71.76
TraesCS4D01G324800.1	Wheat	cytosol	69.41	71.68
TraesCS5A01G499900.1	Wheat	cytosol	69.09	71.27
TraesCS5A01G301700.1	Wheat	cytosol	67.41	69.46
TraesCS5B01G299000.1	Wheat	cytosol	67.19	69.39
TraesCS5D01G306400.1	Wheat	cytosol	67.09	69.36
HORVU4Hr1G081670.1	Barley	cytosol	68.67	66.63
GSMUA_Achr6P16270_001	Banana	cytosol	60.44	66.55
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	57.81	65.71
GSMUA_Achr10P...	Banana	cytosol	62.97	64.96
GSMUA_Achr6P11770_001	Banana	cytosol	27.11	63.93
TraesCS1B01G295100.1	Wheat	plasma membrane	45.15	62.66
Os11t0537400-01	Rice	plasma membrane	2.85	61.36
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	59.07	60.61
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	59.81	60.45
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	29.32	60.3
Solyc03g117980.2.1	Tomato	nucleus	59.49	60.13
Bra037520.1-P	Field mustard	cytosol	58.23	59.87
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	57.81	59.5
Solyc06g068680.2.1	Tomato	cytosol	53.38	59.04
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	57.28	58.96
HORVU1Hr1G072160.5	Barley	cytosol	58.02	58.82
AT5G51060.1	Thale cress	cytosol	55.8	58.45
VIT_19s0014g02830.t01	Wine grape	cytosol	51.79	58.45
TraesCS1A01G285700.1	Wheat	cytosol	57.49	58.35
KRH63901	Soybean	cytosol, nucleus, plasma membrane	56.75	57.97
VIT_01s0150g00450.t01	Wine grape	cytosol	56.33	57.85
KRH54051	Soybean	cytosol, nucleus, plasma membrane	57.17	57.6
Bra029194.1-P	Field mustard	cytosol	55.27	57.58
KRH41026	Soybean	mitochondrion	53.59	57.21
HORVU1Hr1G072140.1	Barley	cytosol	55.8	56.94
AT4G25090.1	Thale cress	cytosol	50.32	56.18
KRH59706	Soybean	cytosol	53.06	56.01
TraesCS1B01G295300.1	Wheat	cytosol	50.21	55.87
AT5G07390.1	Thale cress	cytosol	52.85	55.54
Zm00001d023859_P001	Maize	plastid	52.74	55.43
Zm00001d040805_P003	Maize	cytosol	52.32	55.17
Zm00001d009248_P002	Maize	cytosol	52.11	55.07
TraesCS1D01G284800.1	Wheat	plastid	57.81	54.85
TraesCS1A01G357100.1	Wheat	cytosol	37.66	54.84
Bra009266.1-P	Field mustard	cytosol	51.9	54.55
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	47.89	54.5
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	45.99	52.34
HORVU5Hr1G078630.1	Barley	cytosol	53.27	52.33
TraesCS1D01G285000.1	Wheat	cytosol	49.16	51.32
Zm00001d043543_P002	Maize	mitochondrion	48.63	48.89
Zm00001d038762_P001	Maize	plastid	48.52	48.52
HORVU0Hr1G013380.4	Barley	plastid	39.98	48.22
TraesCS1D01G284900.1	Wheat	cytosol	57.59	47.07
Bra011911.1-P	Field mustard	cytosol	31.86	46.89
Zm00001d009349_P004	Maize	plastid	40.61	46.84
Zm00001d040974_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	40.82	45.96
Zm00001d042961_P002	Maize	plasma membrane	41.77	44.85
Zm00001d032079_P001	Maize	mitochondrion	45.78	44.47
TraesCS1B01G295200.1	Wheat	cytosol	55.8	43.25
Zm00001d029861_P002	Maize	plastid	31.86	40.0
Zm00001d020609_P001	Maize	mitochondrion	27.0	36.11
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	8.02	35.68
Bra013862.1-P	Field mustard	cytosol	9.39	34.36
CDY22645	Canola	cytosol	7.59	31.86
Zm00001d003559_P001	Maize	plasma membrane	12.24	15.26

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	UniProt:A0A1D6F6A5	ncoils:Coil
InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd
InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048
InterPro:IPR017927	InterPro:NADPH_Ox	ProteinID:ONM26799.1	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030
PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972
PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix
UniParc:UPI0002209A61	EnsemblPlantsGene:Zm00001d007421	EnsemblPlants:Zm00001d007421_P004	EnsemblPlants:Zm00001d007421_T004	SEG:seg	:

Description

Respiratory burst oxidase homolog protein C

Coordinates

chr2:-:231301834..231307098

Molecular Weight (calculated)

105996.0 Da

IEP (calculated)

9.507

GRAVY (calculated)

-0.225

Length

948 amino acids

Sequence
(BLAST)

001: MSLSATAAGE APPQHERVIP HSGTLSKKPR ARNSARFVEV APAPSSAAND DVEITLDVRD GSVAMLSVEP AHAGSAGDDP SVTLLPRPLE NNHRRSPSYG
101: HSLIRNASSR IMQASQELRR LGSSSRRGAA GPRTDLSKSA AAHALKGLKF ISKAQGTAGW EAVETRFHVL AESGLLHRSK FGECIGMNEA AFAGELFDAL
201: SRRRNITGDS ISQAEMLLFW DQISDTSFDG RLQTFFDMVD KDADGRITEE EIIEMLLYMA KKRMQIITLS ASTNKLSKIT EQQAAEYALL IMEELDPGNL
301: GYIDVHNLET LLLQAPSSQS VSIGTGAKDM SQMLSQSLRP TPEPNPLRRW HRRAQYFLED NWRRVWVVLL WLCVCVGLFA WKFAQYRRRY VFQVMGYCVC
401: VAKGGAETLK FNMALILLPV CRNTITWVRN HTGVGRVVPL DDNISFHMVV AAGITVGAGL HVVSHLTCDF PRLLRATDAA YAPLAQYFGV PRPRNYWWFV
501: KGTEGWTGLA MLVLMAVAFT LAMPWFRRGE LALPGPLKRL TDPLKRLTDT LKRLTAGPLK RLTGFNAFWY THHCFVAVYA LLLVHGHYLY LTHKWYKKST
601: WMYLAAPMVL YACERLTRAL RSRVRAVKIL KVGLHQAGKD KVMSLHFSKP QGFRYKSGQY IFVNCAAVSP FEWHPFSITS APQDEYLSVH IKNKGDWTGK
701: LQEVFSRVCR PPTEGNSGLL RDDSANANLS FPEVRIDGPY GAPAQDYKQY DVVLLVGQGI GATPMISIIK DIINNMKQLD VDLEAGAGSS SGLSTAGADT
801: SPPSPSFRTR RAYFYWVTPE QGSFEWFRDV MNEVAETDKK GVIELHNHCT SVYGEGDARS ALITMIQSLN HAKHGVDVVS GTRVKTHFAR PNWHNVYERI
901: ALNHQNQRVG VFYCGGAPEP LKTLRKLAQE FSRETNYDTK FEFHKENF

Best Arabidopsis Sequence Match ( AT5G47910.1 )
(BLAST)

001: MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F

Arabidopsis Description

RBOHDRespiratory burst oxidase homolog protein D [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.