Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- peroxisome 1
- mitochondrion 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d044642_P001 | |
| Zm00001d044644_P001 | |
| Zm00001d052416_P002 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G64060.1 | Zm00001d044642_P001 | AT5G21326.1 | 23162070 |
| AT1G64060.1 | Zm00001d044644_P001 | AT5G21326.1 | 23162070 |
| AT1G64060.1 | Zm00001d052416_P002 | AT5G21326.1 | 23162070 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG22389 | Sorghum | mitochondrion | 98.31 | 97.39 |
| Os05t0528000-01 | Rice | mitochondrion | 90.4 | 90.12 |
| TraesCS1A01G347700.1 | Wheat | mitochondrion | 88.19 | 86.99 |
| TraesCS1D01G350600.1 | Wheat | mitochondrion | 88.29 | 86.47 |
| Zm00001d043543_P002 | Maize | mitochondrion | 85.86 | 86.32 |
| TraesCS1B01G362200.1 | Wheat | mitochondrion | 88.5 | 86.32 |
| HORVU1Hr1G081950.8 | Barley | plastid | 81.12 | 79.12 |
| GSMUA_Achr9P05450_001 | Banana | mitochondrion | 70.99 | 77.27 |
| GSMUA_Achr6P31850_001 | Banana | mitochondrion | 71.1 | 75.56 |
| VIT_02s0025g00510.t01 | Wine grape | cytosol | 72.36 | 72.75 |
| PGSC0003DMT400032088 | Potato | cytosol, nucleus, peroxisome | 13.61 | 72.07 |
| KRH41250 | Soybean | cytosol | 70.57 | 71.09 |
| KRH59983 | Soybean | cytosol, nucleus, plasma membrane | 70.36 | 70.88 |
| KRH77593 | Soybean | cytosol | 68.78 | 70.33 |
| KRH27880 | Soybean | cytosol | 68.67 | 70.23 |
| CDY08347 | Canola | mitochondrion | 69.3 | 69.6 |
| AT1G64060.1 | Thale cress | cytosol | 69.2 | 69.49 |
| Bra027764.1-P | Field mustard | mitochondrion | 69.41 | 69.41 |
| Solyc08g081690.2.1 | Tomato | cytosol | 70.46 | 69.37 |
| CDY38202 | Canola | mitochondrion | 66.35 | 66.7 |
| Zm00001d009349_P004 | Maize | plastid | 47.05 | 54.26 |
| Zm00001d009248_P002 | Maize | cytosol | 50.11 | 52.95 |
| Zm00001d040974_P002 | Maize | cytosol, peroxisome, plasma membrane, plastid | 46.84 | 52.73 |
| Zm00001d040805_P003 | Maize | cytosol | 49.79 | 52.5 |
| Zm00001d052653_P003 | Maize | cytosol, plastid | 52.53 | 51.29 |
| Zm00001d032079_P001 | Maize | mitochondrion | 52.53 | 51.02 |
| Zm00001d023859_P001 | Maize | plastid | 48.42 | 50.89 |
| Zm00001d042961_P002 | Maize | plasma membrane | 46.2 | 49.6 |
| Zm00001d007421_P004 | Maize | cytosol | 48.52 | 48.52 |
| Zm00001d007430_P002 | Maize | cytosol | 41.03 | 47.32 |
| Zm00001d007426_P001 | Maize | cytosol, plastid | 46.62 | 44.42 |
| Zm00001d020609_P001 | Maize | mitochondrion | 32.07 | 42.88 |
| Zm00001d029861_P002 | Maize | plastid | 31.75 | 39.87 |
| Zm00001d003559_P001 | Maize | plasma membrane | 13.29 | 16.58 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:10.1.1 | Gene3D:2.40.30.10 | UniProt:A0A1D6MAD7 | ProteinID:AQK87754.1 | ProteinID:AQK87756.1 |
| ncoils:Coil | InterPro:Cyt_b245_heavy_chain | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:FAD-bd_8 |
| InterPro:Fd_Rdtase_FAD-bd | InterPro:Fe3_Rdtase_TM_dom | InterPro:Fe_red_NAD-bd_6 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0050664 | GO:GO:0055114 | GO:GO:0098869 |
| InterPro:IPR002048 | InterPro:IPR017927 | InterPro:NADPH_Ox | PFAM:PF01794 | PFAM:PF08022 | PFAM:PF08030 |
| PFAM:PF08414 | PRINTS:PR00466 | ScanProsite:PS00018 | PFscan:PS50222 | PFscan:PS51384 | PANTHER:PTHR11972 |
| PANTHER:PTHR11972:SF66 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF47473 | SUPFAM:SSF52343 | SUPFAM:SSF63380 | TMHMM:TMhelix |
| UniParc:UPI000221BB65 | EnsemblPlantsGene:Zm00001d038762 | EnsemblPlants:Zm00001d038762_P001 | EnsemblPlants:Zm00001d038762_T001 | SEG:seg | : |
Description
respiratory burst oxidase3 respiratory burst oxidase3
Coordinates
chr6:+:164016293..164027541
Molecular Weight (calculated)
106894.0 Da
IEP (calculated)
9.783
GRAVY (calculated)
-0.254
Length
948 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGGGGPGVG TPGRPRWGSG ATTPRSLSTG SSPRGSDRSS DDGEELVEVT LDLLEDDNIV LRSVEPAAAA AAPAPPRRHP DPTPSSSAAP SRSRSPAMRR
101: TSSHRLLQFS QELKATASRA KQFSQDLTKR FTRTQSRANL AGEPPAAAPS GIDAALEARA QRRRRAQLDR TKSGAQRAIR GLRFISGGNK ASNAWIEVQA
201: NFDRLARDGY LSRADFPKCI GMTESQEFAM ELFDTLSRRR QMQVDRINKD ELREIWQQIT DNSFDSRLQI FFDMVDKNAD GHITEAEVKE IIMLSASANK
301: LSRLKEQAEE YAALIMEELD PEGLGYIELW QLETLLLQKD TYVNYSQALS YTSQALSQNL AGLRKRSPIR KISSTLNYYL EDNWKRVWVL AVWIGIMAGL
401: FIWKFIQYRN RYVFDVMGYC VTTAKGAAET LKLNMALILL PVCRNTITWL RNTKAARALP FDDNINFHKT IAAAIVVGVV LHAGNHLVCD FPRLISSSEV
501: KYAPLRKYFG ENKPTYLDLV KGVEGITGII MVVCMLIAFT LATRWFRRSL VKLPRPFDKL TGFNAFWYSH HLFIIVYISL VIHGECLYLI HDWYKRTTWM
601: YLAVPVGLYV GERTLRFFRS GSYSVRLLKV AIYPGNVLTL QMSKPPTFRY KSGQYMFVQC PAVSPFEWHP FSITSAPGDD YLSIHVRQLG DWTRELKRVF
701: SAACEPPVGG KSGLLRADET TKKALPKLLI DGPYGSPAQD YSKYDVLLLV GLGIGATPFI SILKDLLNNI IKMEEEEEAS SDLYPPIGRS KAHVDLDTLM
801: RITSKPKRVL KTTNAYFYWV TREQGSFDWF KGVMNEIAEL DQRNIIEMHN YLTSVYEEGD ARSALITMLQ ALNHAKNGVD IVSGTKVRTH FARPNFKKVL
901: SKIATKHPYA KIGVFYCGAP VLAQELSKLC YEFNGKSTTK FEFHKEHF
101: TSSHRLLQFS QELKATASRA KQFSQDLTKR FTRTQSRANL AGEPPAAAPS GIDAALEARA QRRRRAQLDR TKSGAQRAIR GLRFISGGNK ASNAWIEVQA
201: NFDRLARDGY LSRADFPKCI GMTESQEFAM ELFDTLSRRR QMQVDRINKD ELREIWQQIT DNSFDSRLQI FFDMVDKNAD GHITEAEVKE IIMLSASANK
301: LSRLKEQAEE YAALIMEELD PEGLGYIELW QLETLLLQKD TYVNYSQALS YTSQALSQNL AGLRKRSPIR KISSTLNYYL EDNWKRVWVL AVWIGIMAGL
401: FIWKFIQYRN RYVFDVMGYC VTTAKGAAET LKLNMALILL PVCRNTITWL RNTKAARALP FDDNINFHKT IAAAIVVGVV LHAGNHLVCD FPRLISSSEV
501: KYAPLRKYFG ENKPTYLDLV KGVEGITGII MVVCMLIAFT LATRWFRRSL VKLPRPFDKL TGFNAFWYSH HLFIIVYISL VIHGECLYLI HDWYKRTTWM
601: YLAVPVGLYV GERTLRFFRS GSYSVRLLKV AIYPGNVLTL QMSKPPTFRY KSGQYMFVQC PAVSPFEWHP FSITSAPGDD YLSIHVRQLG DWTRELKRVF
701: SAACEPPVGG KSGLLRADET TKKALPKLLI DGPYGSPAQD YSKYDVLLLV GLGIGATPFI SILKDLLNNI IKMEEEEEAS SDLYPPIGRS KAHVDLDTLM
801: RITSKPKRVL KTTNAYFYWV TREQGSFDWF KGVMNEIAEL DQRNIIEMHN YLTSVYEEGD ARSALITMLQ ALNHAKNGVD IVSGTKVRTH FARPNFKKVL
901: SKIATKHPYA KIGVFYCGAP VLAQELSKLC YEFNGKSTTK FEFHKEHF
001: MKPFSKNDRR RWSFDSVSAG KTAVGSASTS PGTEYSINGD QEFVEVTIDL QDDDTIVLRS VEPATAINVI GDISDDNTGI MTPVSISRSP TMKRTSSNRF
101: RQFSQELKAE AVAKAKQLSQ ELKRFSWSRS FSGNLTTTST AANQSGGAGG GLVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKQ KNVDGWNDVQ
201: SNFEKFEKNG YIYRSDFAQC IGMKDSKEFA LELFDALSRR RRLKVEKINH DELYEYWSQI NDESFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLSASAN
301: KLSRLKEQAE EYAALIMEEL DPERLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRGKSRI HRMSSDFVYI MQENWKRIWV LSLWIMIMIG
401: LFLWKFFQYK QKDAFHVMGY CLLTAKGAAE TLKFNMALIL FPVCRNTITW LRSTRLSYFV PFDDNINFHK TIAGAIVVAV ILHIGDHLAC DFPRIVRATE
501: YDYNRYLFHY FQTKQPTYFD LVKGPEGITG ILMVILMIIS FTLATRWFRR NLVKLPKPFD RLTGFNAFWY SHHLFVIVYI LLILHGIFLY FAKPWYVRTT
601: WMYLAVPVLL YGGERTLRYF RSGSYSVRLL KVAIYPGNVL TLQMSKPTQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPE DDYISIHIRQ LGDWTQELKR
701: VFSEVCEPPV GGKSGLLRAD ETTKKSLPKL LIDGPYGAPA QDYRKYDVLL LVGLGIGATP FISILKDLLN NIVKMEEHAD SISDFSRSSE YSTGSNGDTP
801: RRKRILKTTN AYFYWVTREQ GSFDWFKGVM NEVAELDQRG VIEMHNYLTS VYEEGDARSA LITMVQALNH AKNGVDIVSG TRVRTHFARP NWKKVLTKLS
901: SKHCNARIGV FYCGVPVLGK ELSKLCNTFN QKGSTKFEFH KEHF
101: RQFSQELKAE AVAKAKQLSQ ELKRFSWSRS FSGNLTTTST AANQSGGAGG GLVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKQ KNVDGWNDVQ
201: SNFEKFEKNG YIYRSDFAQC IGMKDSKEFA LELFDALSRR RRLKVEKINH DELYEYWSQI NDESFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLSASAN
301: KLSRLKEQAE EYAALIMEEL DPERLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRGKSRI HRMSSDFVYI MQENWKRIWV LSLWIMIMIG
401: LFLWKFFQYK QKDAFHVMGY CLLTAKGAAE TLKFNMALIL FPVCRNTITW LRSTRLSYFV PFDDNINFHK TIAGAIVVAV ILHIGDHLAC DFPRIVRATE
501: YDYNRYLFHY FQTKQPTYFD LVKGPEGITG ILMVILMIIS FTLATRWFRR NLVKLPKPFD RLTGFNAFWY SHHLFVIVYI LLILHGIFLY FAKPWYVRTT
601: WMYLAVPVLL YGGERTLRYF RSGSYSVRLL KVAIYPGNVL TLQMSKPTQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPE DDYISIHIRQ LGDWTQELKR
701: VFSEVCEPPV GGKSGLLRAD ETTKKSLPKL LIDGPYGAPA QDYRKYDVLL LVGLGIGATP FISILKDLLN NIVKMEEHAD SISDFSRSSE YSTGSNGDTP
801: RRKRILKTTN AYFYWVTREQ GSFDWFKGVM NEVAELDQRG VIEMHNYLTS VYEEGDARSA LITMVQALNH AKNGVDIVSG TRVRTHFARP NWKKVLTKLS
901: SKHCNARIGV FYCGVPVLGK ELSKLCNTFN QKGSTKFEFH KEHF
Arabidopsis Description
RBOHFRespiratory burst oxidase homolog protein F [Source:UniProtKB/Swiss-Prot;Acc:O48538]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.