Factsheet for Bra027764.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002369.1-P
Bra011481.1-P
Bra017615.1-P
Bra020156.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64060.1	Bra011481.1-P	AT4G33950.1	19716822
AT1G64060.1	Bra017615.1-P	AT4G33950.1	19716822
AT1G64060.1	Bra002369.1-P	AT5G21326.1	23162070
AT1G64060.1	Bra020156.1-P	AT5G21326.1	23162070

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38202	Canola	mitochondrion	96.84	97.35
AT1G64060.1	Thale cress	cytosol	93.14	93.54
VIT_02s0025g00510.t01	Wine grape	cytosol	78.27	78.69
PGSC0003DMT400032088	Potato	cytosol, nucleus, peroxisome	14.77	78.21
KRH41250	Soybean	cytosol	77.11	77.68
KRH59983	Soybean	cytosol, nucleus, plasma membrane	77.0	77.58
KRH27880	Soybean	cytosol	75.84	77.56
KRH77593	Soybean	cytosol	75.74	77.45
Solyc08g081690.2.1	Tomato	cytosol	78.48	77.26
GSMUA_Achr9P05450_001	Banana	mitochondrion	67.62	73.59
GSMUA_Achr6P31850_001	Banana	mitochondrion	68.57	72.87
EES01429	Sorghum	mitochondrion	69.83	70.13
Zm00001d043543_P002	Maize	mitochondrion	69.62	69.99
Zm00001d038762_P001	Maize	plastid	69.41	69.41
TraesCS3B01G314000.2	Wheat	mitochondrion	68.99	69.28
TraesCS3D01G279900.1	Wheat	mitochondrion	68.88	69.03
KXG22389	Sorghum	mitochondrion	69.3	68.65
HORVU3Hr1G069690.1	Barley	mitochondrion	8.65	67.77
TraesCS1A01G347700.1	Wheat	mitochondrion	67.72	66.81
TraesCS3A01G280200.1	Wheat	mitochondrion	68.78	66.8
TraesCS1D01G350600.1	Wheat	mitochondrion	67.93	66.53
TraesCS1B01G362200.1	Wheat	mitochondrion	67.93	66.26
Bra033151.1-P	Field mustard	cytosol	44.09	56.18
Bra031658.1-P	Field mustard	cytosol	49.37	55.32
Os01t0734200-00	Rice	mitochondrion, nucleus	17.93	53.63
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	51.58	53.09
Bra037520.1-P	Field mustard	cytosol	50.95	52.39
Bra029194.1-P	Field mustard	cytosol	49.89	51.98
Bra031070.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	51.69	51.04
Bra009266.1-P	Field mustard	cytosol	46.84	49.22
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	43.25	49.22
Bra025721.1-P	Field mustard	cytosol, nucleus, peroxisome	52.74	48.31
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	42.41	48.26
Bra020270.1-P	Field mustard	cytosol	44.51	47.74
Bra038274.1-P	Field mustard	cytosol	42.41	46.0
Bra011911.1-P	Field mustard	cytosol	30.91	45.5
Bra013862.1-P	Field mustard	cytosol	9.07	33.2
Bra009719.1-P	Field mustard	golgi, plasma membrane	11.08	21.21
Bra029389.1-P	Field mustard	plasma membrane	14.45	19.63
Bra023239.1-P	Field mustard	plasma membrane	14.66	19.12
Bra037329.1-P	Field mustard	cytosol, peroxisome, plasma membrane	14.35	18.84
Bra032641.1-P	Field mustard	plasma membrane	13.5	18.44
Bra033252.1-P	Field mustard	golgi, plasma membrane	13.61	18.43
Bra032640.1-P	Field mustard	plasma membrane	13.61	17.79
Bra037953.1-P	Field mustard	plasma membrane	13.29	17.03

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	EnsemblPlantsGene:Bra027764	EnsemblPlants:Bra027764.1	EnsemblPlants:Bra027764.1-P
ncoils:Coil	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8
InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0002679	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0007231	GO:GO:0008150	GO:GO:0008152
GO:GO:0008219	GO:GO:0009058	GO:GO:0009628	GO:GO:0009719	GO:GO:0009723	GO:GO:0009987
GO:GO:0010119	GO:GO:0016020	GO:GO:0016021	GO:GO:0016174	GO:GO:0016491	GO:GO:0033500
GO:GO:0043069	GO:GO:0050664	GO:GO:0050665	GO:GO:0052542	GO:GO:0055114	GO:GO:0098869
InterPro:IPR002048	InterPro:IPR017927	UniProt:M4EG51	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022
PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF66	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	UniParc:UPI0002542218	SEG:seg	:	:	:

Description

AT1G64060 (E=0.0) ATRBOH F, ATRBOHF, RBOHAP108, RBOHF | ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F); NAD(P)H oxidase

Coordinates

chrA09:+:6368345..6373828

Molecular Weight (calculated)

108205.0 Da

IEP (calculated)

9.506

GRAVY (calculated)

-0.268

Length

948 amino acids

Sequence
(BLAST)

001: MRPFSKNDRR RWSFDSVSAG KLAVGSASTS PGTECSNGGY GEEFVEVTID LQDDDTIVLR SVEPATSINI DISDETAGGG AGGGIMTPAS ISRSPTMKRT
101: SSNRLRQFSQ ELKAEAVAKA KQLSHELKRF SWSRSFSGTL TSANQNGGGG GIVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKN KNVEGWNDVQ
201: TNFEKLAKNG YIYRSDFAQC IGMKDSKEFA LELYDALSRR RRLKVEKISH DELYEYWLQI NDDSFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLSASAN
301: KLSRLKEQAE EYAALIMEEL DPERLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRKNSRI HRMSSDFVYF MQENWKRIWV LSLWIMIMIG
401: LFLWKFFQYK QKDAFHVMGY CLLTAKGAAE TLKFNMALIL FPVCRNTITW LRSTRLSYFI PFDDNINFHK TIAGAILVAV ILHVGDHIAC DFPRIVRATE
501: YDYNRYLFHY FQHKQPTYFD LVKGPEGITG ILMIILMAIS FTLATRWFRR NLVKLPKPFD RLTGFNAFWY SHHLFIIVYV LLVLHGIFLY FAKPWYVHTT
601: WMYLAVPVLL YGGERTLRYF RSGSYSVRLL KVAIYPGNVL TLQMSKPSQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPG DDYLSIHIRQ LGDWTQELKR
701: VFSEVCEPPV AGKSGLLRAD ETTKKSLPKL LIDGPYGAPA QDYRKYDVLL LVGLGIGATP FISILKDLLN NIVKMEEQAD SISDFSRSSE NSTGSNSGNN
801: ANTPRGKKIL KTTNAYFYWV TREQGSFDWF KGVMNEVAEL DQRGVIEMHN YLTSVYEEGD ARSALITMVQ ALNHAKNGVD IVSGTSVRTH FARPNWKKVL
901: SKLSSKHCNA RIGVFYCGVP VLGKELSKLC NTFNQKGSTK FEFHKEHF

Best Arabidopsis Sequence Match ( AT1G64060.1 )
(BLAST)

001: MKPFSKNDRR RWSFDSVSAG KTAVGSASTS PGTEYSINGD QEFVEVTIDL QDDDTIVLRS VEPATAINVI GDISDDNTGI MTPVSISRSP TMKRTSSNRF
101: RQFSQELKAE AVAKAKQLSQ ELKRFSWSRS FSGNLTTTST AANQSGGAGG GLVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKQ KNVDGWNDVQ
201: SNFEKFEKNG YIYRSDFAQC IGMKDSKEFA LELFDALSRR RRLKVEKINH DELYEYWSQI NDESFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLSASAN
301: KLSRLKEQAE EYAALIMEEL DPERLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRGKSRI HRMSSDFVYI MQENWKRIWV LSLWIMIMIG
401: LFLWKFFQYK QKDAFHVMGY CLLTAKGAAE TLKFNMALIL FPVCRNTITW LRSTRLSYFV PFDDNINFHK TIAGAIVVAV ILHIGDHLAC DFPRIVRATE
501: YDYNRYLFHY FQTKQPTYFD LVKGPEGITG ILMVILMIIS FTLATRWFRR NLVKLPKPFD RLTGFNAFWY SHHLFVIVYI LLILHGIFLY FAKPWYVRTT
601: WMYLAVPVLL YGGERTLRYF RSGSYSVRLL KVAIYPGNVL TLQMSKPTQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPE DDYISIHIRQ LGDWTQELKR
701: VFSEVCEPPV GGKSGLLRAD ETTKKSLPKL LIDGPYGAPA QDYRKYDVLL LVGLGIGATP FISILKDLLN NIVKMEEHAD SISDFSRSSE YSTGSNGDTP
801: RRKRILKTTN AYFYWVTREQ GSFDWFKGVM NEVAELDQRG VIEMHNYLTS VYEEGDARSA LITMVQALNH AKNGVDIVSG TRVRTHFARP NWKKVLTKLS
901: SKHCNARIGV FYCGVPVLGK ELSKLCNTFN QKGSTKFEFH KEHF

Arabidopsis Description

RBOHFRespiratory burst oxidase homolog protein F [Source:UniProtKB/Swiss-Prot;Acc:O48538]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.