Factsheet for Zm00001d043543_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d044642_P001
Zm00001d044644_P001
Zm00001d052416_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64060.1	Zm00001d044642_P001	AT5G21326.1	23162070
AT1G64060.1	Zm00001d044644_P001	AT5G21326.1	23162070
AT1G64060.1	Zm00001d052416_P002	AT5G21326.1	23162070

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01429	Sorghum	mitochondrion	98.62	98.52
Os01t0734466-01	Rice	peroxisome, plasma membrane	53.55	94.22
HORVU3Hr1G069780.1	Barley	mitochondrion	87.17	87.73
TraesCS3D01G279900.1	Wheat	mitochondrion	87.91	87.63
TraesCS3B01G314000.2	Wheat	mitochondrion	87.7	87.61
Zm00001d038762_P001	Maize	plastid	86.32	85.86
TraesCS3A01G280200.1	Wheat	mitochondrion	87.59	84.63
GSMUA_Achr9P05450_001	Banana	mitochondrion	72.32	78.3
GSMUA_Achr6P31850_001	Banana	mitochondrion	72.11	76.23
VIT_02s0025g00510.t01	Wine grape	cytosol	72.75	72.75
KRH41250	Soybean	cytosol	72.53	72.69
KRH59983	Soybean	cytosol, nucleus, plasma membrane	72.22	72.37
KRH77593	Soybean	cytosol	69.67	70.87
KRH27880	Soybean	cytosol	69.57	70.77
Solyc08g081690.2.1	Tomato	cytosol	71.79	70.3
CDY08347	Canola	mitochondrion	69.99	69.92
AT1G64060.1	Thale cress	cytosol	69.99	69.92
PGSC0003DMT400032088	Potato	cytosol, nucleus, peroxisome	13.26	69.83
Bra027764.1-P	Field mustard	mitochondrion	69.99	69.62
CDY38202	Canola	mitochondrion	66.91	66.91
Zm00001d009349_P004	Maize	plastid	46.77	53.65
Zm00001d009248_P002	Maize	cytosol	50.27	52.84
Zm00001d040974_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	46.66	52.26
Zm00001d040805_P003	Maize	cytosol	49.73	52.17
Zm00001d032079_P001	Maize	mitochondrion	53.45	51.64
Zm00001d052653_P003	Maize	cytosol, plastid	52.92	51.39
Zm00001d023859_P001	Maize	plastid	48.78	51.0
Zm00001d042961_P002	Maize	plasma membrane	46.13	49.26
Zm00001d007421_P004	Maize	cytosol	48.89	48.63
Zm00001d007430_P002	Maize	cytosol	41.78	47.93
Zm00001d007426_P001	Maize	cytosol, plastid	46.98	44.52
Zm00001d020609_P001	Maize	mitochondrion	32.66	43.44
Zm00001d029861_P002	Maize	plastid	33.3	41.59
Zm00001d003559_P001	Maize	plasma membrane	13.15	16.32

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	UniProt:A0A1D6ND49	ncoils:Coil	InterPro:Cyt_b245_heavy_chain
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom
InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927
InterPro:NADPH_Ox	ProteinID:ONM38416.1	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414
PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF66
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0002208D65
EnsemblPlantsGene:Zm00001d043543	EnsemblPlants:Zm00001d043543_P002	EnsemblPlants:Zm00001d043543_T002	SEG:seg	:	:

Description

respiratory burst oxidase2 respiratory burst oxidase2

Coordinates

chr3:+:203425340..203444747

Molecular Weight (calculated)

106351.0 Da

IEP (calculated)

9.591

GRAVY (calculated)

-0.220

Length

943 amino acids

Sequence
(BLAST)

001: MRGAAAPGHQ RWSGSAGTTP RSLSTGSSPR GSERSSDDGE ELVEVTLDLQ EDDTIILRSV EPAAAGGATA LPLGARGDHA GGASSSSRSL SPSIRRTSSH
101: RLLQFSQELK AEAMSIARQF SQDLTKRFGR TQSRAEGQGQ QQQPSSGIES ALAARAARRQ RAQLDRTRSG AHKALRGLRF ISSNKANNAW MEVQANFDRL
201: ASEGFLSRSD FAECIGMTES KEFALELFDT LSRRRQVQVD KINKEELREI WQQITDNSFD SRLQIFFDMV DKNADGRIGE EEVKEIIMLS ASANKLSRLK
301: EQAEEYAALI MEELDPEGLG YIELWQLETL LLQKDTYMNY SQALSYTSQA LSQNLAGLRK KSPIRKISTT LSYYLEDNWK RLWVLALWIG IMAGLFTWKF
401: MQYRNRYVFN VMGYCVTTAK GAAETLKLNM AIILLPVCRN TITWLRNTRA ARALPFDDNI NFHKTIAAAI VVGIILHAGN HLVCDFPRLI NSSNEKYAPL
501: GQYFGETKPT YFTLVKGVEG ITGVIMVICM IIAFTLATRW FRRSLVKLPK PFDKLTGFNA FWYSHHLFII VYLALIVHGQ FLYLIHVWYR KTTWMYLAVP
601: VCLYVGERVL RFFRSGSYSV RLLKVAIYPG NVLTLQMSKP PAFRYKSGQY MFVQCPAVSP FEWHPFSITS APGDDYLSIH VRQLGDWTRE LKRVFAAACE
701: PPVGGKSGLL RADETTKKAL PKLLIDGPYG SPAQDYSKYD VLLLVGLGIG ATPFISILKD LLNNIIRMEE EEDASTDLYP PVGPNKPHID LSTLMTVTSR
801: PKRVLRTTNA YFYWVTREQG SFDWFKGVMN EIAELDQRNI IEMHNYLTSV YEEGDARSAL ITMLQALNHA KNGVDIVSGT KVRTHFARPN WKKVLSKIAS
901: KHPFAKIGVF YCGAPVLAQE LNKLCHEFNG KSTTKFEFHK EHF

Best Arabidopsis Sequence Match ( AT1G64060.1 )
(BLAST)

001: MKPFSKNDRR RWSFDSVSAG KTAVGSASTS PGTEYSINGD QEFVEVTIDL QDDDTIVLRS VEPATAINVI GDISDDNTGI MTPVSISRSP TMKRTSSNRF
101: RQFSQELKAE AVAKAKQLSQ ELKRFSWSRS FSGNLTTTST AANQSGGAGG GLVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKQ KNVDGWNDVQ
201: SNFEKFEKNG YIYRSDFAQC IGMKDSKEFA LELFDALSRR RRLKVEKINH DELYEYWSQI NDESFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLSASAN
301: KLSRLKEQAE EYAALIMEEL DPERLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRGKSRI HRMSSDFVYI MQENWKRIWV LSLWIMIMIG
401: LFLWKFFQYK QKDAFHVMGY CLLTAKGAAE TLKFNMALIL FPVCRNTITW LRSTRLSYFV PFDDNINFHK TIAGAIVVAV ILHIGDHLAC DFPRIVRATE
501: YDYNRYLFHY FQTKQPTYFD LVKGPEGITG ILMVILMIIS FTLATRWFRR NLVKLPKPFD RLTGFNAFWY SHHLFVIVYI LLILHGIFLY FAKPWYVRTT
601: WMYLAVPVLL YGGERTLRYF RSGSYSVRLL KVAIYPGNVL TLQMSKPTQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPE DDYISIHIRQ LGDWTQELKR
701: VFSEVCEPPV GGKSGLLRAD ETTKKSLPKL LIDGPYGAPA QDYRKYDVLL LVGLGIGATP FISILKDLLN NIVKMEEHAD SISDFSRSSE YSTGSNGDTP
801: RRKRILKTTN AYFYWVTREQ GSFDWFKGVM NEVAELDQRG VIEMHNYLTS VYEEGDARSA LITMVQALNH AKNGVDIVSG TRVRTHFARP NWKKVLTKLS
901: SKHCNARIGV FYCGVPVLGK ELSKLCNTFN QKGSTKFEFH KEHF

Arabidopsis Description

RBOHFRespiratory burst oxidase homolog protein F [Source:UniProtKB/Swiss-Prot;Acc:O48538]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.