Factsheet for Zm00001d020609_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35704	Sorghum	mitochondrion	83.36	58.69
TraesCS5B01G212100.1	Wheat	mitochondrion	78.0	56.14
TraesCS5D01G222100.1	Wheat	mitochondrion	78.28	55.84
HORVU5Hr1G062490.8	Barley	plasma membrane	76.87	55.22
TraesCS5A01G211800.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	76.73	55.01
Os09t0438000-01	Rice	mitochondrion	77.57	54.62
Zm00001d032079_P001	Maize	mitochondrion	66.71	48.46
GSMUA_Achr3P05840_001	Banana	mitochondrion	59.1	47.08
GSMUA_Achr8P23680_001	Banana	mitochondrion	58.11	46.24
Solyc05g025690.1.1	Tomato	mitochondrion	15.09	44.21
PGSC0003DMT400066027	Potato	peroxisome	27.5	42.58
VIT_11s0016g00540.t01	Wine grape	cytosol, peroxisome, plastid	51.62	39.91
PGSC0003DMT400035268	Potato	mitochondrion	50.07	37.77
KRH37549	Soybean	cytosol	48.66	37.18
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	48.52	36.83
Solyc07g042460.1.1	Tomato	cytosol	45.7	36.78
KRH12608	Soybean	cytosol	48.52	36.75
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	48.1	36.51
AT1G19230.2	Thale cress	cytosol, peroxisome, plasma membrane	48.24	35.92
Bra031070.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	48.38	35.73
CDY41031	Canola	cytosol, peroxisome, plasma membrane	49.08	34.22
Bra025721.1-P	Field mustard	cytosol, nucleus, peroxisome	49.08	33.62
Zm00001d043543_P002	Maize	mitochondrion	43.44	32.66
CDY26689	Canola	cytosol, peroxisome, plasma membrane	46.83	32.65
Zm00001d038762_P001	Maize	plastid	42.88	32.07
Solyc05g025680.1.1	Tomato	plasma membrane	28.21	32.05
Zm00001d009349_P004	Maize	plastid	33.0	28.47
Zm00001d009248_P002	Maize	cytosol	35.26	27.87
Zm00001d040805_P003	Maize	cytosol	35.26	27.81
Zm00001d007430_P002	Maize	cytosol	32.16	27.74
Zm00001d052653_P003	Maize	cytosol, plastid	37.52	27.39
Zm00001d040974_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	32.3	27.2
Zm00001d023859_P001	Maize	plastid	34.41	27.05
Zm00001d007421_P004	Maize	cytosol	36.11	27.0
Zm00001d042961_P002	Maize	plasma membrane	33.0	26.5
Zm00001d007426_P001	Maize	cytosol, plastid	34.84	24.82
Zm00001d029861_P002	Maize	plastid	24.26	22.78
Zm00001d003559_P001	Maize	plasma membrane	8.32	7.76

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	UniProt:A0A1D6I559	ncoils:Coil	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom
InterPro:Fe3_Rdtase_TM_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:NADPH_Ox	ProteinID:ONM55252.1
PFAM:PF01794	PFAM:PF08414	PFscan:PS50222	PANTHER:PTHR11972	PANTHER:PTHR11972:SF80	SUPFAM:SSF47473
TMHMM:TMhelix	UniParc:UPI0008450A72	EnsemblPlantsGene:Zm00001d020609	EnsemblPlants:Zm00001d020609_P001	EnsemblPlants:Zm00001d020609_T001	SEG:seg

Description

Riboflavin synthase-like superfamily protein

Coordinates

chr7:+:124925904..124930053

Molecular Weight (calculated)

78240.7 Da

IEP (calculated)

9.195

GRAVY (calculated)

-0.157

Length

709 amino acids

Sequence
(BLAST)

001: MWTPSRGSNA RRSGHRRIAD YLADDQTTTT ATDASDNESY TTAYGEEFFA AAAAGSGGAG GMLPAFLADQ GDLVEVMLEL DEESMVVRSV TPTSAALYGA
101: ASLPAPPSAG VLGVSPSPRR APSEGGGRLS RCSSTSSRIR KKFAWLRSPS PSPSPYRPTP AELQREAAMA ARERRREQAQ LNRSRAGARR ALKGLRFISR
201: TTGSVEAAEL WRRVEERFND LAREGLLSRD DFGECIVHIV ILRTREETAR SYCNCDVLIR DLMALHAQTA GMVDSKEFAV GIFDALARRR RQNLERITKE
301: ELYDFWLQIS DQSFDARLQI FFDMVDTNVD GRITREEVQE LIVLSASANK LAKLKEQAEE YASLIMEELD PEKLGYIELW QLEALLLQRD TYMNYSRPLS
401: TASGAQWSQN LGVGGALTIT GGGGDGGCGV DGDHPGPPRE RRRSWGVRKA AARVRVAAEE NWRRAWVLAL WFAAMAALFV WKFVQYRRMA AFQVMGYCLP
501: TAKGAAETLK LNMALVLLPV CRNTLTWLRS SWARFFVPFD DNITFHKMIA TAIVVGITLH AGNHLACDFP RVIAASPEEY ALVAGAFGAD KPTYAGLLSG
601: TEGVTGVAMV VLMTVSFTLA THPFRKGEPK GAGAAAGTSR LPAPLNRLTG FNAFWYSHHL LGIVYALLLA HGYFLFLVRR WYEKTSEQLR RITVAMTMPL
701: EIVAARQRA

Best Arabidopsis Sequence Match ( AT1G09090.1 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVTIF QE

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.