CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, nucleus, cytosol

Predictor Summary:

plastid 3
cytosol 1
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	97.43	97.43
AT1G19230.2	Thale cress	cytosol, peroxisome, plasma membrane	86.83	85.19
CDY41031	Canola	cytosol, peroxisome, plasma membrane	89.61	82.3
CDY26689	Canola	cytosol, peroxisome, plasma membrane	88.12	80.92
Solyc05g025680.1.1	Tomato	plasma membrane	44.97	67.31
VIT_11s0016g00540.t01	Wine grape	cytosol, peroxisome, plastid	64.35	65.54
Solyc07g042460.1.1	Tomato	cytosol	60.92	64.59
PGSC0003DMT400035268	Potato	mitochondrion	64.13	63.72
PGSC0003DMT400066027	Potato	peroxisome	31.05	63.32
KRH37549	Soybean	cytosol	61.46	61.85
KRH12608	Soybean	cytosol	61.56	61.43
GSMUA_Achr3P05840_001	Banana	mitochondrion	57.17	60.0
GSMUA_Achr8P23680_001	Banana	mitochondrion	57.17	59.93
TraesCS5B01G212100.1	Wheat	mitochondrion	59.64	56.55
CDY65632	Canola	nucleus, peroxisome	8.67	56.25
TraesCS5D01G222100.1	Wheat	mitochondrion	59.64	56.04
TraesCS5A01G211800.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	59.31	56.02
KXG35704	Sorghum	mitochondrion	60.39	56.01
HORVU5Hr1G062490.8	Barley	plasma membrane	58.99	55.83
Os09t0438000-01	Rice	mitochondrion	59.64	55.31
Zm00001d032079_P001	Maize	mitochondrion	57.71	55.23
TraesCS6D01G164500.1	Wheat	mitochondrion, plasma membrane	55.89	54.95
TraesCS6A01G180600.1	Wheat	mitochondrion	56.21	54.92
TraesCS6B01G205000.1	Wheat	mitochondrion	56.21	54.86
CDY22644	Canola	plasma membrane	33.3	53.99
KXG25273	Sorghum	mitochondrion	58.24	53.97
HORVU6Hr1G035970.2	Barley	mitochondrion	53.75	52.35
CDY08347	Canola	mitochondrion	52.14	51.59
CDX92671	Canola	cytosol	39.83	49.21
CDY38202	Canola	mitochondrion	49.25	48.78
Zm00001d020609_P001	Maize	mitochondrion	36.51	48.1
CDY06348	Canola	cytosol	41.54	47.55
Solyc05g025690.1.1	Tomato	mitochondrion	12.21	47.11
CDX81047	Canola	cytosol	42.72	46.83
CDY35764	Canola	cytosol, nucleus, plasma membrane	45.07	46.83
CDY11053	Canola	cytosol, nucleus, plasma membrane	41.54	46.58
CDX85316	Canola	cytosol, nucleus, plasma membrane	45.93	46.53
CDX86335	Canola	cytosol, nucleus, plasma membrane	45.82	46.42
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	45.61	46.25
CDX81049	Canola	cytosol	42.4	46.21
CDX78290	Canola	cytosol	42.18	46.14
CDX86059	Canola	peroxisome, plasma membrane, plastid	19.16	45.78
CDY38845	Canola	cytosol, peroxisome, plasma membrane	44.54	45.71
CDY32647	Canola	cytosol, peroxisome, plasma membrane	44.54	45.71
CDX92675	Canola	cytosol	18.84	45.6
CDY08237	Canola	cytosol, peroxisome, plasma membrane	25.91	45.49
CDX70035	Canola	cytosol	42.93	45.26
CDX92674	Canola	mitochondrion	16.81	45.11
CDY11054	Canola	cytosol, nucleus, plasma membrane	39.4	45.1
CDY26109	Canola	mitochondrion	28.16	44.58
CDX98976	Canola	cytosol	43.04	44.27
CDY25278	Canola	cytosol, peroxisome, plasma membrane	44.11	44.16
Os08t0453700-00	Rice	plastid	44.86	44.11
CDY63433	Canola	cytosol	44.54	43.93
CDY09233	Canola	cytosol	38.76	40.95
CDX99140	Canola	cytosol, peroxisome, plasma membrane	34.48	38.15
CDX86058	Canola	cytosol	12.42	33.53
CDY34341	Canola	nucleus	8.89	32.05
CDY70539	Canola	nucleus	9.96	30.39
CDY22645	Canola	cytosol	6.32	26.11
CDX88061	Canola	plasma membrane	14.35	20.24
CDY44266	Canola	plasma membrane, vacuole	14.99	20.06
CDY46972	Canola	plasma membrane, vacuole	14.78	19.77
CDY69826	Canola	cytosol, plastid, vacuole	7.28	19.05
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	2.57	18.9
CDY38013	Canola	golgi, plasma membrane	9.96	18.86
CDX90043	Canola	golgi, plasma membrane	11.56	18.59
CDY38014	Canola	plasma membrane	13.7	18.16
CDY22585	Canola	plasma membrane	14.03	18.07
CDY12264	Canola	plasma membrane	13.49	17.85
CDY07230	Canola	plasma membrane	13.49	17.75
CDY65711	Canola	plasma membrane	12.85	16.22
CDX71600	Canola	plasma membrane	12.85	16.19
CDY68445	Canola	plastid	8.35	14.77
CDY38012	Canola	plasma membrane	4.5	13.86

Protein Annotations

KEGG:00480+1.11.1.-	Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	GO:A0A078CYL2
EnsemblPlants:CDX81920	ProteinID:CDX81920	ProteinID:CDX81920.1	ncoils:Coil	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00136881001	InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022
PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF44	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	UniParc:UPI0004EDD7A1	SEG:seg	:	:	:

Description

BnaC08g36810D

Coordinates

chrLK031826:+:1472658..1477911

Molecular Weight (calculated)

105988.0 Da

IEP (calculated)

8.832

GRAVY (calculated)

-0.233

Length

934 amino acids

Sequence
(BLAST)

001: MKLSPKSFSN FSLSNDVDGL ELRPSPVSGG AMLPIFLSSL SRNGSGSSWE RELVEVTLEL DGDDSIVVCG MSEAASVDTR PRLMRNLSTA PARIRQTLEK
101: LLRSESSDST RATTSVGRER DIESQGRDTP IMSARDKRKE EVKLQRTRSS AQRALQGLQF INKTTKGNSC GCGWDCDCDE MWKKAEKRFE SLSREGLLAR
201: EDFGECVGMK DSKEFAVSVF DALARRRRQK LEKITKDELH DFWLLISDQS FDARLQIFFD MADSNEDGRI TKEEIKELLM LSASANKLAK LKEQAEEYAS
301: LIMEELDPEN FGYIELWQLE TLLLQRDTYM DYSRPLSTAS VGITTPRRNL IKPRSVVLKC RQKLQCLVLD NWQRIWVLLL WFTVMAILFV WKFLQYKDKA
401: AFRVMGYCLT TSKGAAETLK LNMALVLLPV CRNTLTWLRS TRARAFVPFD DNINFHKIIA CAIVIGILVH AGTHLACDFP RIINSTPEDF ALIASPFNGV
501: KPTFKDLMTG AEGITGMSMV ILTTIAFTLA STHFRRNRVS LPAPLDRLTG FNAFWYTHHL LVVVYIMLIV HGTLLFFADK WYQKTTWMYI SVPLVLYAAE
601: RSIRACRSNH YSVKILKVSM LPGEVLSIIM SKPPGFKYKS GQYIFFQCPT ISRFEWHPFS ITSAPGDEQL SVHIRTQGDW TEELQRVLTV GKDLSTCVTG
701: RTKFAAHCNI DLQDRPKLLV DGPYGAPAQD YRSYDVLLLI GLGIGATPFI SILKDLMNNS RDEQILNEFS RSDFSWNSYT SSYTTPTPTS TQGGGKKAVK
801: AHFYWVTKEP GSVEWFRGVM EEISDMDYRG QIELHNYLTS VYDEGDARST LIKMVQALNH AKHGVDILSG TRVRTHFARP NWKEVFGSIA RKHPNSTVGV
901: FYCGIPTVAK ELKKQAQEMS QKTTTKFEFR KENF

Best Arabidopsis Sequence Match ( AT1G19230.2 )
(BLAST)

001: MKLSPLSFST SSSFSHADGI DDGVELISSP FAGGAMLPVF LNDLSRNSGE SGSGSSWERE LVEVTLELDV GDDSILVCGM SEAASVDSRA RSVDLVTARL
101: SRNLSNASTR IRQKLGKLLR SESWKTTTSS TAGERDRDLE RQTAVTLGIL TARDKRKEDA KLQRSTSSAQ RALKGLQFIN KTTRGNSCVC DWDCDCDQMW
201: KKVEKRFESL SKNGLLARDD FGECVGMVDS KDFAVSVFDA LARRRRQKLE KITKDELHDF WLQISDQSFD ARLQIFFDMA DSNEDGKITR EEIKELLMLS
301: ASANKLAKLK EQAEEYASLI MEELDPENFG YIELWQLETL LLQRDAYMNY SRPLSTTSGG VSTPRRNLIR PRHVVQKCRK KLQCLILDNW QRSWVLLVWV
401: MLMAILFVWK FLEYREKAAF KVMGYCLTTA KGAAETLKLN MALVLLPVCR NTLTWLRSTR ARACVPFDDN INFHKIIACA IAIGILVHAG THLACDFPRI
501: INSSPEQFVL IASAFNGTKP TFKDLMTGAE GITGISMVIL TTIAFTLAST HFRRNRVRLP APLDRLTGFN AFWYTHHLLV VVYIMLIVHG TFLFFADKWY
601: QKTTWMYISV PLVLYVAERS LRACRSKHYS VKILKVSMLP GEVLSLIMSK PPGFKYKSGQ YIFLQCPTIS RFEWHPFSIT SAPGDDQLSV HIRTLGDWTE
701: ELRRVLTVGK DLSTCVIGRS KFSAYCNIDM INRPKLLVDG PYGAPAQDYR SYDVLLLIGL GIGATPFISI LKDLLNNSRD EQTDNEFSRS DFSWNSCTSS
801: YTTATPTSTH GGKKKAVKAH FYWVTREPGS VEWFRGVMEE ISDMDCRGQI ELHNYLTSVY DEGDARSTLI KMVQALNHAK HGVDILSGTR VRTHFARPNW
901: KEVFSSIARK HPNSTVGVFY CGIQTVAKEL KKQAQDMSQK TTTRFEFHKE HF

Arabidopsis Description

RBOHERespiratory burst oxidase homolog protein E [Source:UniProtKB/Swiss-Prot;Acc:O81211]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.