CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid, vacuole
Any Predictor:	cytosol, plastid, vacuole
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38013	Canola	golgi, plasma membrane	90.48	65.52
CDX90043	Canola	golgi, plasma membrane	94.96	58.35
AT1G01580.2	Thale cress	plasma membrane	84.87	37.73
CDY07230	Canola	plasma membrane	68.07	34.23
CDY38014	Canola	plasma membrane	63.87	32.34
CDY68445	Canola	plastid	47.34	32.01
CDX88061	Canola	plasma membrane	51.26	27.64
CDY44266	Canola	plasma membrane, vacuole	51.82	26.5
CDY46972	Canola	plasma membrane, vacuole	51.82	26.5
CDY65632	Canola	nucleus, peroxisome	8.12	20.14
CDX86059	Canola	peroxisome, plasma membrane, plastid	17.65	16.11
CDY12264	Canola	plasma membrane	29.41	14.87
CDX92674	Canola	mitochondrion	14.29	14.66
CDY22585	Canola	plasma membrane	29.41	14.48
CDY65711	Canola	plasma membrane	28.29	13.65
CDX71600	Canola	plasma membrane	27.73	13.36
CDY22644	Canola	plasma membrane	19.05	11.81
CDY08237	Canola	cytosol, peroxisome, plasma membrane	17.09	11.47
CDY26109	Canola	mitochondrion	17.37	10.51
CDX92671	Canola	cytosol	19.05	8.99
CDY06348	Canola	cytosol	18.77	8.21
CDY11053	Canola	cytosol, nucleus, plasma membrane	18.77	8.04
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	2.8	7.87
CDX99140	Canola	cytosol, peroxisome, plasma membrane	18.21	7.7
CDX85316	Canola	cytosol, nucleus, plasma membrane	19.33	7.48
CDY38202	Canola	mitochondrion	19.61	7.42
CDY08347	Canola	mitochondrion	19.61	7.42
CDX81047	Canola	cytosol	17.65	7.39
CDX86335	Canola	cytosol, nucleus, plasma membrane	19.05	7.38
CDY35764	Canola	cytosol, nucleus, plasma membrane	18.49	7.34
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	19.05	7.28
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	19.05	7.28
CDY38845	Canola	cytosol, peroxisome, plasma membrane	18.49	7.25
CDY32647	Canola	cytosol, peroxisome, plasma membrane	18.49	7.25
CDX70035	Canola	cytosol	17.93	7.22
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	18.49	7.17
CDY09233	Canola	cytosol	17.65	7.13
CDX81049	Canola	cytosol	17.09	7.12
CDY11054	Canola	cytosol, nucleus, plasma membrane	16.25	7.11
CDY25278	Canola	cytosol, peroxisome, plasma membrane	18.49	7.07
CDX78290	Canola	cytosol	16.81	7.03
CDY63433	Canola	cytosol	18.49	6.97
CDX98976	Canola	cytosol	17.65	6.94
CDY26689	Canola	cytosol, peroxisome, plasma membrane	18.49	6.49
CDY41031	Canola	cytosol, peroxisome, plasma membrane	18.49	6.49
CDY38012	Canola	plasma membrane	3.92	4.62
CDY22645	Canola	cytosol	1.4	2.21
CDY70539	Canola	nucleus	1.12	1.31
CDX86058	Canola	cytosol	0.56	0.58
CDX92675	Canola	cytosol	0.56	0.52
CDY34341	Canola	nucleus	0.0	0.0

Protein Annotations

MapMan:25.4.2.1	MapMan:25.5.2.1	Gene3D:3.40.50.80	GO:A0A078JWG0	UniProt:A0A078JWG0	EnsemblPlants:CDY69826
ProteinID:CDY69826	ProteinID:CDY69826.1	InterPro:Cyt_b245_heavy_chain	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00092806001	InterPro:IPR017927	PFAM:PF08022
PFAM:PF08030	PRINTS:PR00466	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF41	SUPFAM:SSF52343
TMHMM:TMhelix	UniParc:UPI0004EF15AC	SEG:seg	:	:	:

Description

BnaCnng65560DBnaCnng65560D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JWG0]

Coordinates

chrLK040442:+:2..1596

Molecular Weight (calculated)

39916.4 Da

IEP (calculated)

8.912

GRAVY (calculated)

0.003

Length

357 amino acids

Sequence
(BLAST)

001: SNLLYIISRL QWHPFTITSS SNLEAEKLSV VIKSEGKWST KLYQRLSSSH QIDRLAVSVE GPYGPASTDF FMHEALVMVS GGSGITPFIS VIRDMIATSQ
101: NQKCKIPKIT LICAFKNSSE ISMLHLVLPL SGLQTELSSD INIKIEAFIT REKEPRSEAT TEQIKTLWFK PSLSDQPISS ILGPNSWLWL GGILSSSFLI
201: FMIIIGIISR YYIYPIDHNT YKIYSWTSES IIYILVICVS IMATSSAAMF WNKKKYGNNV ETKQVQNVEL PSTTSSPTSC GYNSMREIES SPQESLVQRT
301: TLHYGERPNL TKLLLDVEGS SVGVLVCGPK KMRQKVAKIC STGLAKNLHF ESISFSW

Best Arabidopsis Sequence Match ( AT1G01580.1 )
(BLAST)

001: MEIEKSNNGG SNPSAGEEFK DMIKGVTKFL MMVIFLGTIM LWIMMPTLTY RTKWLPHLRI KFGTSTYFGA TGTTLFMYMF PMMVVACLGC VYLHFKNRKS
101: PHHIDRETKG GVWSKLRKPM LVKGPLGIVS VTEITFLAMF VALLLWCFIT YLRNSFATIT PKSAAAHDES LWQAKLESAA LRLGLIGNIC LAFLFLPVAR
201: GSSLLPAMGL TSESSIKYHI WLGHMVMALF TVHGLCYIIY WASMHEISQM IMWDTKGVSN LAGEIALAAG LVMWATTYPK IRRRFFEVFF YTHYLYIVFM
301: LFFVLHVGIS FSFIALPGFY IFLVDRFLRF LQSRENVRLL AARILPSDTM ELTFSKNSKL VYSPTSIMFV NIPSISKLQW HPFTITSSSK LEPEKLSIVI
401: KKEGKWSTKL HQRLSSSDQI DRLAVSVEGP YGPASADFLR HEALVMVCGG SGITPFISVI RDLIATSQKE TCKIPKITLI CAFKKSSEIS MLDLVLPLSG
501: LETELSSDIN IKIEAFITRD NDAGDEAKAG KIKTLWFKPS LSDQSISSIL GPNSWLWLGA ILASSFLIFM IIIGIITRYY IYPIDHNTNK IYSLTSKTII
601: YILVISVSIM ATCSAAMLWN KKKYGKVESK QVQNVDRPSP TSSPTSSWGY NSLREIESTP QESLVQRTNL HFGERPNLKK LLLDVEGSSV GVLVCGPKKM
701: RQKVAEICSS GLAENLHFES ISFSW

Arabidopsis Description

FRO2ferric reduction oxidase 2 [Source:TAIR;Acc:AT1G01580]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.