Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12264 | Canola | plasma membrane | 93.79 | 96.32 |
| AT5G50160.1 | Thale cress | plasma membrane | 80.14 | 79.81 |
| Solyc03g112320.2.1 | Tomato | plasma membrane | 40.97 | 53.51 |
| VIT_17s0000g09160.t01 | Wine grape | plasma membrane | 48.83 | 50.36 |
| PGSC0003DMT400046647 | Potato | plasma membrane | 47.86 | 49.64 |
| KRH57132 | Soybean | plasma membrane | 42.34 | 47.16 |
| KRH03224 | Soybean | peroxisome | 46.62 | 46.88 |
| CDX68510 | Canola | extracellular, mitochondrion, plasma membrane, plastid | 6.48 | 37.01 |
| GSMUA_Achr6P28010_001 | Banana | plasma membrane, plastid | 39.45 | 36.9 |
| CDY38013 | Canola | golgi, plasma membrane | 22.21 | 32.66 |
| CDY07230 | Canola | plasma membrane | 31.86 | 32.54 |
| CDX90043 | Canola | golgi, plasma membrane | 25.79 | 32.19 |
| CDY38014 | Canola | plasma membrane | 30.9 | 31.77 |
| CDX88061 | Canola | plasma membrane | 27.45 | 30.06 |
| CDY69826 | Canola | cytosol, plastid, vacuole | 14.48 | 29.41 |
| CDY44266 | Canola | plasma membrane, vacuole | 28.28 | 29.37 |
| CDY46972 | Canola | plasma membrane, vacuole | 28.28 | 29.37 |
| CDY65711 | Canola | plasma membrane | 27.59 | 27.03 |
| CDX71600 | Canola | plasma membrane | 27.59 | 26.99 |
| CDY68445 | Canola | plastid | 15.45 | 21.21 |
| CDY38012 | Canola | plasma membrane | 8.83 | 21.12 |
| CDX86059 | Canola | peroxisome, plasma membrane, plastid | 10.48 | 19.44 |
| CDY22644 | Canola | plasma membrane | 13.93 | 17.53 |
| CDX92674 | Canola | mitochondrion | 7.45 | 15.52 |
| CDY25278 | Canola | cytosol, peroxisome, plasma membrane | 19.31 | 15.01 |
| CDX92671 | Canola | cytosol | 15.59 | 14.95 |
| CDY26109 | Canola | mitochondrion | 12.14 | 14.92 |
| CDY08237 | Canola | cytosol, peroxisome, plasma membrane | 10.9 | 14.85 |
| CDY08347 | Canola | mitochondrion | 19.17 | 14.72 |
| CDY63433 | Canola | cytosol | 19.17 | 14.68 |
| CDY65632 | Canola | nucleus, peroxisome | 2.9 | 14.58 |
| CDY38202 | Canola | mitochondrion | 18.76 | 14.42 |
| CDY35764 | Canola | cytosol, nucleus, plasma membrane | 17.79 | 14.35 |
| CDX85316 | Canola | cytosol, nucleus, plasma membrane | 18.07 | 14.21 |
| CDY09233 | Canola | cytosol | 17.24 | 14.14 |
| CDX70035 | Canola | cytosol | 17.24 | 14.11 |
| CDX86335 | Canola | cytosol, nucleus, plasma membrane | 17.93 | 14.1 |
| CDY06348 | Canola | cytosol | 15.86 | 14.09 |
| CDY21676 | Canola | cytosol, peroxisome, plasma membrane, plastid | 18.07 | 14.03 |
| CDX81920 | Canola | cytosol, nucleus, plasma membrane, plastid | 18.07 | 14.03 |
| CDY45918 | Canola | cytosol, nucleus, plasma membrane, plastid | 17.79 | 14.01 |
| CDY11053 | Canola | cytosol, nucleus, plasma membrane | 16.0 | 13.93 |
| CDX81049 | Canola | cytosol | 16.28 | 13.77 |
| CDX81047 | Canola | cytosol | 16.0 | 13.62 |
| CDX78290 | Canola | cytosol | 16.0 | 13.58 |
| CDX98976 | Canola | cytosol | 16.97 | 13.55 |
| CDY38845 | Canola | cytosol, peroxisome, plasma membrane | 16.97 | 13.52 |
| CDY32647 | Canola | cytosol, peroxisome, plasma membrane | 16.83 | 13.41 |
| CDX99140 | Canola | cytosol, peroxisome, plasma membrane | 15.45 | 13.27 |
| CDY41031 | Canola | cytosol, peroxisome, plasma membrane | 17.93 | 12.78 |
| CDY11054 | Canola | cytosol, nucleus, plasma membrane | 14.34 | 12.75 |
| CDY26689 | Canola | cytosol, peroxisome, plasma membrane | 17.79 | 12.68 |
| CDX92675 | Canola | cytosol | 5.1 | 9.59 |
| CDX86058 | Canola | cytosol | 3.86 | 8.09 |
| CDY22645 | Canola | cytosol | 2.48 | 7.96 |
| CDY70539 | Canola | nucleus | 2.9 | 6.86 |
| CDY34341 | Canola | nucleus | 2.34 | 6.56 |
Protein Annotations
| Gene3D:2.40.30.10 | MapMan:25.4.2.1 | MapMan:25.5.2.1 | Gene3D:3.40.50.80 | GO:A0A078G7Z7 | UniProt:A0A078G7Z7 |
| EnsemblPlants:CDY22585 | ProteinID:CDY22585 | ProteinID:CDY22585.1 | InterPro:Cyt_b245_heavy_chain | InterPro:FAD-bd_8 | InterPro:Fd_Rdtase_FAD-bd |
| InterPro:Fe3_Rdtase_TM_dom | InterPro:Fe_red_NAD-bd_6 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00019228001 |
| InterPro:IPR017927 | PFAM:PF01794 | PFAM:PF08022 | PFAM:PF08030 | PRINTS:PR00466 | PFscan:PS51384 |
| PANTHER:PTHR11972 | PANTHER:PTHR11972:SF83 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF52343 | SUPFAM:SSF63380 | TMHMM:TMhelix |
| UniParc:UPI0004EE8BCD | SEG:seg | : | : | : | : |
Description
BnaC05g24230DBnaC05g24230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7Z7]
Coordinates
chrLK032133:+:394917..398000
Molecular Weight (calculated)
82720.1 Da
IEP (calculated)
9.986
GRAVY (calculated)
0.290
Length
725 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKMLTLLVL RLLMNLLLIS WISLWIIKPT TVWIQSWRQA EDTFQHTFFG YYGVSFAVFT FPPIALSIIG LIYLSLLPQH HRLTRGGRSA AITVSRPAII
101: SSFIGIVSCF EIVAVILFLV FLAWTFYVRV NNDLKKLMPV KTMNFDLWQL KYFRVATRFG LLAEACLSLL LFPVLRGLSM FRLLNIQFAA SVKYHVWLGT
201: GLVFFSLVHG GSTLFIWGIS HNIEEEIWKW QRTGRVYVAG VISLVIGLLM WITSLPQIRR KCFETFYYTH HLYIVFLVSF LFHAGDRHFY WILPGVFLFG
301: LDKTLRIVQS RSESRILSAR LYSCKAVELV LPKDPRLNYA PSSFIFMNIP SISQFQWHPF SITSSSSVDK HTMSVMMKCE GKWTDSVYKK LEEAADSDTN
401: NITIRVEGPY GPVSVDFLRY DTLFLVAGGI GITPFLNILQ ELACENRLKT PKSVQLVFSV RTFQDINMLV PVSPILFRPI HNLNLRIKVF VTQEKKHSNG
501: PTTLKEYLAQ PQVQTIHIGT DEDFSRFQIL GHESFRRLAT LVLVALLTFL GLLIGLSHFF IPNEHKKHSN SMKLAASGAM TTAKEKVPSW VPDLVIIVAY
601: VIAMTIGGLA AIILQWRRQH RETLRMTKEE VNPQGRNFTE STPIVPMEEH GIHIGERPKF KEILSEFETS LRGLSSIGVL VCGPESMKEA VASICRQRFQ
701: CFGVDDSRTI LNKVNLNFHS LNFSL
101: SSFIGIVSCF EIVAVILFLV FLAWTFYVRV NNDLKKLMPV KTMNFDLWQL KYFRVATRFG LLAEACLSLL LFPVLRGLSM FRLLNIQFAA SVKYHVWLGT
201: GLVFFSLVHG GSTLFIWGIS HNIEEEIWKW QRTGRVYVAG VISLVIGLLM WITSLPQIRR KCFETFYYTH HLYIVFLVSF LFHAGDRHFY WILPGVFLFG
301: LDKTLRIVQS RSESRILSAR LYSCKAVELV LPKDPRLNYA PSSFIFMNIP SISQFQWHPF SITSSSSVDK HTMSVMMKCE GKWTDSVYKK LEEAADSDTN
401: NITIRVEGPY GPVSVDFLRY DTLFLVAGGI GITPFLNILQ ELACENRLKT PKSVQLVFSV RTFQDINMLV PVSPILFRPI HNLNLRIKVF VTQEKKHSNG
501: PTTLKEYLAQ PQVQTIHIGT DEDFSRFQIL GHESFRRLAT LVLVALLTFL GLLIGLSHFF IPNEHKKHSN SMKLAASGAM TTAKEKVPSW VPDLVIIVAY
601: VIAMTIGGLA AIILQWRRQH RETLRMTKEE VNPQGRNFTE STPIVPMEEH GIHIGERPKF KEILSEFETS LRGLSSIGVL VCGPESMKEA VASICRQRFQ
701: CFGVDDSRTI LNKVNLNFHS LNFSL
001: MAKVLTLLVL RLLMNLLLIG WISLWIIKPT TIWIQSWRQA EDTARHTFFG YYGLNFAVFS FPPIALSIVG LIYLSLLPQH HHPTRGGRGA AITVSRPAII
101: NSFIGIVSCF EILALLLFLL FLAWNFYARV SNDFKKLMPV KTMNLNLWQL KYYRVATRFG LLAEACLSLL LFPVLRGLSM FRLLNIEFAA SVKYHVWFGT
201: GLIFFSLVHG GSTLFIWTIT HHIEEEIWKW QRTGRVYVAG LISLVTGLLM WITSLPQIRR KNFEVFYYTH HLYIVFLVAF LFHAGDRHFY WVLPGMFLFG
301: LDKILRIVQS RSESCILSAN LFSCKAIELV LPKDPMLNYA PSSFIFLNIP LVSRFQWHPF SIISSSSVDK HSLSIMMKCE GDWTNSVYNK IEEAANCENK
401: INNIIVRVEG PYGPASVDFL RYDNLFLVAG GIGITPFLSI LKELASKNRL KSPKRVQLVF AVRTFQDLNM LLPIASIIFN PIYNLNLKLK VFVTQEKKPS
501: NGTTTLQEFL AQSQVQSIHL GTDEDYSRFP IRGPESFRWL ATLVLITVLT FLGFLIGLSH FFIPSEHKNH SGVMKLAASG AMKTAKEKVP SWVPDLIIIV
601: SYVIAISVGG FAATILQRRR KHKEAPRMSK EVVIKPEERN FTELKPIPIT EEHEIHIGER PKLEEIMSEF EKNLRGWSSV GVLVCGPESV KEAVASMCRQ
701: WPQCFGVEDL RRSRMKMNLN FHSLNFNL
101: NSFIGIVSCF EILALLLFLL FLAWNFYARV SNDFKKLMPV KTMNLNLWQL KYYRVATRFG LLAEACLSLL LFPVLRGLSM FRLLNIEFAA SVKYHVWFGT
201: GLIFFSLVHG GSTLFIWTIT HHIEEEIWKW QRTGRVYVAG LISLVTGLLM WITSLPQIRR KNFEVFYYTH HLYIVFLVAF LFHAGDRHFY WVLPGMFLFG
301: LDKILRIVQS RSESCILSAN LFSCKAIELV LPKDPMLNYA PSSFIFLNIP LVSRFQWHPF SIISSSSVDK HSLSIMMKCE GDWTNSVYNK IEEAANCENK
401: INNIIVRVEG PYGPASVDFL RYDNLFLVAG GIGITPFLSI LKELASKNRL KSPKRVQLVF AVRTFQDLNM LLPIASIIFN PIYNLNLKLK VFVTQEKKPS
501: NGTTTLQEFL AQSQVQSIHL GTDEDYSRFP IRGPESFRWL ATLVLITVLT FLGFLIGLSH FFIPSEHKNH SGVMKLAASG AMKTAKEKVP SWVPDLIIIV
601: SYVIAISVGG FAATILQRRR KHKEAPRMSK EVVIKPEERN FTELKPIPIT EEHEIHIGER PKLEEIMSEF EKNLRGWSSV GVLVCGPESV KEAVASMCRQ
701: WPQCFGVEDL RRSRMKMNLN FHSLNFNL
Arabidopsis Description
FRO8Ferric reduction oxidase 8, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VY13]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.