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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g112320.2.1 Tomato plasma membrane 76.39 96.22
VIT_17s0000g09160.t01 Wine grape plasma membrane 59.94 59.6
KRH57132 Soybean plasma membrane 50.36 54.07
KRH03224 Soybean peroxisome 54.79 53.12
AT5G50160.1 Thale cress plasma membrane 50.07 48.08
Bra023239.1-P Field mustard plasma membrane 49.79 47.87
CDY22585 Canola plasma membrane 49.64 47.86
CDY12264 Canola plasma membrane 47.93 47.45
GSMUA_Achr6P28010_001 Banana plasma membrane, plastid 43.35 39.1
PGSC0003DMT400000536 Potato plastid 32.76 31.76
PGSC0003DMT400024558 Potato plasma membrane, vacuole 29.9 29.56
PGSC0003DMT400026254 Potato plasma membrane 29.61 29.36
PGSC0003DMT400074349 Potato plasma membrane 31.33 29.32
PGSC0003DMT400046925 Potato plasma membrane 30.19 28.48
PGSC0003DMT400040179 Potato cytosol 18.74 16.88
PGSC0003DMT400032088 Potato cytosol, nucleus, peroxisome 4.15 16.2
PGSC0003DMT400063688 Potato cytosol 18.74 15.11
PGSC0003DMT400078138 Potato cytosol, nucleus, plastid 17.88 14.99
PGSC0003DMT400035268 Potato mitochondrion 19.6 14.57
PGSC0003DMT400036734 Potato cytosol, nucleus, plasma membrane 18.45 13.75
PGSC0003DMT400066027 Potato peroxisome 8.58 13.1
Protein Annotations
EntrezGene:102579721Gene3D:2.40.30.10MapMan:25.4.2.1MapMan:25.5.2.1InterPro:Cyt_b245_heavy_chainInterPro:FAD-bd_8
InterPro:Fd_Rdtase_FAD-bdInterPro:Fe3_Rdtase_TM_domInterPro:Fe_red_NAD-bd_6GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0055114
InterPro:IPR017927UniProt:M1BJE3PFAM:PF01794PFAM:PF08022PFAM:PF08030EnsemblPlantsGene:PGSC0003DMG400018114
PGSC:PGSC0003DMG400018114EnsemblPlants:PGSC0003DMT400046647PRINTS:PR00466PFscan:PS51384PANTHER:PTHR11972PANTHER:PTHR11972:SF83
InterPro:Riboflavin_synthase-like_b-brlSUPFAM:SSF52343SUPFAM:SSF63380TMHMM:TMhelixUniParc:UPI0002956818RefSeq:XP_006344463.1
SEG:seg:::::
Description
ATFRO8/FRO8 [Source:PGSC_GENE;Acc:PGSC0003DMG400018114]
Coordinates
chr3:-:52115659..52118666
Molecular Weight (calculated)
79579.1 Da
IEP (calculated)
10.272
GRAVY (calculated)
0.250
Length
699 amino acids
Sequence
(BLAST)
001: MTKISSLLKL LLFLIFAGWL SVWLLKPTQL WTKTWKLAEK KASASFLTQS GLNFAVYTFP VIAIAIVGFV YLALKQKEPI SRKGRSSLSV LSNPVVVNKY
101: IGILSGFEIL AVCLFVIFLA WTFYVRISND FKKMVPMKSF TLSVWQYRVF RVATRSGLLA EACLALLLLP ILRGMSVFRI LGIQFEASVR YHVWLGTAMI
201: LFGTLHGGGT LLIWGIKHHL GDEMWRWQKT GRIYLAGEIT LLTGLVIWIT SLPQIRRKRF EIFYYTHHLY MVFLVFFLFH TGDRHFYMVL PGFFLFCLDK
301: ILRMIQSRPE TYILSARIFP SKAIELTLPK DPRLTYAPTS VIFIKIPRIS NFQWHPFSIT SSSKVDKHTI SILIKAEGRW TSTLCNMLHS KPDSEAGEMR
401: FFQVATEGPY GPSSMDFLRY DSLLLVAGGI GVTPFLSILQ EIASTRSSKN VLPVKIQLVY TTKDSQGICL LDPVLPHVFD AEQHYLQLKV FVTREHQSNR
501: SLREVLNEVP KIQNIHFTNN RPGHAIYGLE NLQWMSVLIL VVSVVFLAFL IISNHVFIKP DKKSSEQKTA TSVVDILLIC SFTLALISGT LVATIWRWKR
601: LREEIPSFSE KESKAMKPTG ANRVFDQHEI HYGARPNFKD IFSQLANESK GSNIGVFVCG PETLKESVAT TCQLISNGFQ SGGQDHKPFF RFHSLNFSL
Best Arabidopsis Sequence Match ( AT5G50160.1 )
(BLAST)
001: MAKVLTLLVL RLLMNLLLIG WISLWIIKPT TIWIQSWRQA EDTARHTFFG YYGLNFAVFS FPPIALSIVG LIYLSLLPQH HHPTRGGRGA AITVSRPAII
101: NSFIGIVSCF EILALLLFLL FLAWNFYARV SNDFKKLMPV KTMNLNLWQL KYYRVATRFG LLAEACLSLL LFPVLRGLSM FRLLNIEFAA SVKYHVWFGT
201: GLIFFSLVHG GSTLFIWTIT HHIEEEIWKW QRTGRVYVAG LISLVTGLLM WITSLPQIRR KNFEVFYYTH HLYIVFLVAF LFHAGDRHFY WVLPGMFLFG
301: LDKILRIVQS RSESCILSAN LFSCKAIELV LPKDPMLNYA PSSFIFLNIP LVSRFQWHPF SIISSSSVDK HSLSIMMKCE GDWTNSVYNK IEEAANCENK
401: INNIIVRVEG PYGPASVDFL RYDNLFLVAG GIGITPFLSI LKELASKNRL KSPKRVQLVF AVRTFQDLNM LLPIASIIFN PIYNLNLKLK VFVTQEKKPS
501: NGTTTLQEFL AQSQVQSIHL GTDEDYSRFP IRGPESFRWL ATLVLITVLT FLGFLIGLSH FFIPSEHKNH SGVMKLAASG AMKTAKEKVP SWVPDLIIIV
601: SYVIAISVGG FAATILQRRR KHKEAPRMSK EVVIKPEERN FTELKPIPIT EEHEIHIGER PKLEEIMSEF EKNLRGWSSV GVLVCGPESV KEAVASMCRQ
701: WPQCFGVEDL RRSRMKMNLN FHSLNFNL
Arabidopsis Description
FRO8Ferric reduction oxidase 8, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VY13]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.