Factsheet for PGSC0003DMT400078138

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 2
plasma membrane 1
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g075570.1.1	Tomato	cytosol	97.72	98.19
PGSC0003DMT400040179	Potato	cytosol	73.02	78.48
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome	25.42	71.86
VIT_06s0004g03790.t01	Wine grape	nucleus	69.54	68.08
GSMUA_Achr5P29250_001	Banana	cytosol	56.47	65.24
CDX86059	Canola	peroxisome, plasma membrane, plastid	30.22	64.45
GSMUA_AchrUn_...	Banana	cytosol	17.39	63.6
KRH49079	Soybean	cytosol	64.75	62.86
GSMUA_AchrUn_...	Banana	cytosol	32.61	62.1
Os01t0835500-01	Rice	cytosol	62.47	61.8
Zm00001d009349_P004	Maize	plastid	60.43	61.31
Os05t0465800-01	Rice	plasma membrane	60.19	61.29
TraesCS1D01G289300.2	Wheat	mitochondrion	58.51	61.0
GSMUA_Achr10P...	Banana	cytosol	61.63	60.9
TraesCS1A01G290700.2	Wheat	mitochondrion	58.15	60.62
TraesCS3D01G347900.2	Wheat	cytosol	61.51	60.57
OQU87817	Sorghum	cytosol	61.87	60.42
TraesCS3B01G386600.1	Wheat	cytosol	61.39	60.24
TraesCS3A01G354200.2	Wheat	cytosol	61.39	60.16
KXG32613	Sorghum	cytosol, plastid	59.59	60.1
GSMUA_Achr11P...	Banana	mitochondrion	37.65	59.92
Zm00001d040974_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	60.07	59.5
HORVU3Hr1G087210.4	Barley	peroxisome, plastid	61.51	59.24
AT5G60010.1	Thale cress	cytosol	61.51	57.9
Zm00001d042961_P002	Maize	plasma membrane	61.27	57.87
Bra020270.1-P	Field mustard	cytosol	61.27	57.81
CDY09233	Canola	cytosol	61.27	57.81
Bra038274.1-P	Field mustard	cytosol	58.39	55.72
TraesCS1B01G300000.2	Wheat	mitochondrion	58.75	55.06
PGSC0003DMT400032088	Potato	cytosol, nucleus, peroxisome	11.75	54.75
AT3G45810.1	Thale cress	cytosol	59.71	54.61
CDX99140	Canola	cytosol, peroxisome, plasma membrane	51.44	50.83
HORVU1Hr1G071340.13	Barley	mitochondrion, peroxisome, plastid	58.87	48.57
PGSC0003DMT400063688	Potato	cytosol	49.04	47.17
PGSC0003DMT400066027	Potato	peroxisome	25.06	45.63
PGSC0003DMT400035268	Potato	mitochondrion	48.56	43.09
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	48.08	42.75
PGSC0003DMT400046647	Potato	plasma membrane	14.99	17.88
PGSC0003DMT400046925	Potato	plasma membrane	15.35	17.27
PGSC0003DMT400024558	Potato	plasma membrane, vacuole	13.79	16.27
PGSC0003DMT400026254	Potato	plasma membrane	13.55	16.03
PGSC0003DMT400000536	Potato	plastid	13.55	15.67
PGSC0003DMT400074349	Potato	plasma membrane	12.35	13.79

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	EntrezGene:102581762	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom
InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927
UniProt:M1CZG4	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414
EnsemblPlantsGene:PGSC0003DMG400030390	PGSC:PGSC0003DMG400030390	EnsemblPlants:PGSC0003DMT400078138	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222
PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF54	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343
SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0002954DCF	RefSeq:XP_006350900.1	SEG:seg	:

Description

NOX1 [Source:PGSC_GENE;Acc:PGSC0003DMG400030390]

Coordinates

chr6:-:56238355..56242764

Molecular Weight (calculated)

95911.5 Da

IEP (calculated)

9.234

GRAVY (calculated)

-0.264

Length

834 amino acids

Sequence
(BLAST)

001: MVPIDDGDLS RDNSVKWILE NAEKDSTSDV HENINGANGL QEELANQKSF KRNFSISRRR NGVVPRMGRM ESGATRGLKS LRFLDRSTTG KEGDAWRSVE
101: KRFNQNAVNG RIFREKFGTC IGMGESKEFA GELFDTLARR RKINTENGIT IDEVRGFWED ISTQSLDARL HIFFDMCDKN GDGKLSEEEV KEVLVMSASA
201: NKLSKFKQHA PTYAALIMEE LDPDHLGYIE MWQLEALLRG MVGSEEGEKT LKRSQTLAKT MIPKEYRTPV SKFFYKTSEK VQENWKRIWV LTLWLCINMV
301: LFTWKFQQFK RKSAFQIMGY CVCIAKGTGE TLKFNMALVL FPVCRRTLTK LRETFLGSIF PFDENINFHK IIALGIAVAT FIHALFHTSC NFVKLTTCPQ
401: SKFMTFLGSN FDYHQPSYLD LVASIPGVTG ILMTLFMLFT FTLALHSFRR NVIKLPWPFH HLAGFNAFWY AHHLLVLVYI LLVLHGYFIY LTKEWYKKTT
501: WMYLAVPVLA YATERILIVY EHSDNVNIIK AVTYTGNVLA LYMSKPPGFK YKSGMYLFVK CPDISTFEWH PFSITSAPDD NYLSVHIRTL GDWTTELKTR
601: FEKACEPDQV AQSRKGSLVR METKAYTDVE QAQSEFPKIM IKGPYGAPAQ NYKKYDILLL IGLGIGATPF ISILKDLLNN ESQSNQQIGE SSSNRRGPHR
701: AYFYWVTREQ GSFDWFKGVM DDIAEYDHNE MMEMHNYLTS VYEEGDARSA LIAMVQSLQH AKNGVDVVSD SRIRTHFARP NWRKVFSRLA AAHPSSRIGV
801: FYCGSPTLTK PLRRLCQEFS LNSSTRFNFH KENF

Best Arabidopsis Sequence Match ( AT5G60010.1 )
(BLAST)

001: MKSNTPTEDS TKWMLESVEI DSMGESSSKE PEINLNKNEG GLKKNASRNL GVGSIIRTLS VSNWRKSGNL GSPSTRKSGN LGPPTNAVPK KTGPQRVERT
101: TSSAARGLQS LRFLDRTVTG RERDAWRSIE NRFNQFSVDG KLPKEKFGVC IGMGDTMEFA AEVYEALGRR RQIETENGID KEQLKLFWED MIKKDLDCRL
201: QIFFDMCDKN GDGKLTEEEV KEVIVLSASA NRLGNLKKNA AAYASLIMEE LDPDHKGYIE MWQLEILLTG MVTNADTEKM KKSQTLTRAM IPERYRTPMS
301: KYVSVTAELM HENWKKLWVL ALWAIINVYL FMWKYEEFMR NPLYNITGRC VCAAKGAAET LKLNMALILV PVCRKTLTIL RSTFLNRVVP FDDNINFHKV
401: IAYMIAFQAL LHTALHIFCN YPRLSSCSYD VFLTYAGAAL GNTQPSYLGL MLTSVSITGV LMIFFMGFSF TLAMHYFRRN IVKLPKPFNV LAGFNAFWYA
501: HHLLVLAYIL LIIHGYYLII EKPWYQKTTW MYLAVPMLFY ASERLFSRLL QEHSHRVNVI KAIVYSGNVL ALYVTKPPGF KYKSGMYMFV KCPDLSKFEW
601: HPFSITSAPG DDYLSVHIRA LGDWTTELRS RFAKTCEPTQ AAAKPKPNSL MRMETRAAGV NPHIEESQVL FPKIFIKGPY GAPAQNYQKF DILLLVGLGI
701: GATPFISILK DMLNHLKPGI PRSGQKYEGS VGGESIGGDS VSGGGGKKFP QRAYFFWVTR EQASFDWFKG VMDDIAEYDK THVIEMHNYL TSMYEAGDAR
801: SALIAMVQKL QHAKNGVDIV SESRIRTHFA RPNWRKVFSE LSSKHEACRI GVFYCGSPTL VRPLKELCQE FSLESSTRFT FHKENF

Arabidopsis Description

RBOHHPutative respiratory burst oxidase homolog protein H [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.