Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, plastid
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G289300.2 | Wheat | mitochondrion | 73.79 | 93.25 |
| TraesCS1A01G290700.2 | Wheat | mitochondrion | 73.69 | 93.12 |
| TraesCS1B01G300000.2 | Wheat | mitochondrion | 78.54 | 89.21 |
| Os05t0465800-01 | Rice | plasma membrane | 66.47 | 82.05 |
| Zm00001d009349_P004 | Maize | plastid | 66.57 | 81.87 |
| KXG32613 | Sorghum | cytosol, plastid | 66.37 | 81.14 |
| Zm00001d040974_P002 | Maize | cytosol, peroxisome, plasma membrane, plastid | 65.78 | 78.98 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.12 | 71.49 |
| HORVU3Hr1G087210.4 | Barley | peroxisome, plastid | 59.94 | 69.98 |
| GSMUA_AchrUn_... | Banana | cytosol | 27.7 | 63.93 |
| PGSC0003DMT400040179 | Potato | cytosol | 46.98 | 61.21 |
| VIT_06s0004g03790.t01 | Wine grape | nucleus | 50.94 | 60.45 |
| Solyc06g075570.1.1 | Tomato | cytosol | 49.16 | 59.88 |
| CDX86059 | Canola | peroxisome, plasma membrane, plastid | 22.85 | 59.08 |
| PGSC0003DMT400078138 | Potato | cytosol, nucleus, plastid | 48.57 | 58.87 |
| Solyc11g072800.1.1 | Tomato | cytosol | 47.08 | 58.33 |
| KRH49079 | Soybean | cytosol | 48.66 | 57.28 |
| AT5G60010.1 | Thale cress | cytosol | 47.58 | 54.29 |
| Bra020270.1-P | Field mustard | cytosol | 47.08 | 53.85 |
| CDY09233 | Canola | cytosol | 47.08 | 53.85 |
| Bra038274.1-P | Field mustard | cytosol | 44.11 | 51.03 |
| AT3G45810.1 | Thale cress | cytosol | 45.7 | 50.66 |
| HORVU3Hr1G069690.1 | Barley | mitochondrion | 5.84 | 48.76 |
| HORVU4Hr1G086500.1 | Barley | cytosol | 39.86 | 47.69 |
| CDX99140 | Canola | cytosol, peroxisome, plasma membrane | 39.37 | 47.16 |
| HORVU3Hr1G069780.1 | Barley | mitochondrion | 43.62 | 47.07 |
| HORVU1Hr1G091930.1 | Barley | peroxisome, plasma membrane | 21.07 | 46.2 |
| HORVU1Hr1G081950.8 | Barley | plastid | 43.62 | 45.37 |
| HORVU4Hr1G081670.1 | Barley | cytosol | 42.33 | 43.81 |
| HORVU5Hr1G062490.8 | Barley | plasma membrane | 41.35 | 42.35 |
| HORVU5Hr1G024550.3 | Barley | cytosol | 35.31 | 41.56 |
| HORVU6Hr1G035970.2 | Barley | mitochondrion | 39.27 | 41.4 |
| HORVU1Hr1G072160.5 | Barley | cytosol | 38.28 | 41.39 |
| HORVU1Hr1G072140.1 | Barley | cytosol | 37.59 | 40.9 |
| HORVU3Hr1G037600.3 | Barley | cytosol, peroxisome, plastid | 17.11 | 37.69 |
| HORVU5Hr1G078630.1 | Barley | cytosol | 31.75 | 33.26 |
| HORVU0Hr1G013380.4 | Barley | plastid | 25.42 | 32.7 |
| HORVU2Hr1G094150.3 | Barley | golgi, plasma membrane | 5.93 | 21.51 |
| HORVU2Hr1G077650.1 | Barley | peroxisome, plastid | 10.39 | 14.13 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:10.1.1 | Gene3D:2.40.30.10 | Gene3D:3.40.50.80 | UniProt:A0A287G590 | ncoils:Coil |
| InterPro:Cyt_b245_heavy_chain | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:FAD-bd_8 | InterPro:Fd_Rdtase_FAD-bd |
| InterPro:Fe3_Rdtase_TM_dom | InterPro:Fe_red_NAD-bd_6 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 | GO:GO:0005488 |
| GO:GO:0005509 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016491 | GO:GO:0050664 | GO:GO:0055114 | GO:GO:0098869 | EnsemblPlantsGene:HORVU1Hr1G071340 |
| EnsemblPlants:HORVU1Hr1G071340.13 | InterPro:IPR002048 | InterPro:IPR017927 | InterPro:NADPH_Ox | PFAM:PF01794 | PFAM:PF08022 |
| PFAM:PF08030 | PFAM:PF08414 | PRINTS:PR00466 | ScanProsite:PS00018 | PFscan:PS50222 | PFscan:PS51384 |
| PANTHER:PTHR11972 | PANTHER:PTHR11972:SF54 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF47473 | SUPFAM:SSF52343 | SUPFAM:SSF63380 |
| TMHMM:TMhelix | UniParc:UPI000B47D139 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:492786151..492791042
Molecular Weight (calculated)
113877.0 Da
IEP (calculated)
10.101
GRAVY (calculated)
-0.284
Length
1011 amino acids
Sequence
(BLAST)
(BLAST)
0001: RCYDKPRLPL NAFRKNKKKL GAALLAPTST HVAQSRLAVQ RRAEQRSAGQ GRLAWTARHG HWCRAGAGAS ATLSGEAQTK GRREERQGRP ALPRALHACR
0101: CSATAKIGAT PLRNTRHSSP RFLLPSPLRL PTFQIYVRPP AASHRAVVPS PVRAMASSSE GYVDVPLGGE QPPQQQQQQH SGPVMRKQPS RLASGMKRLA
0201: SRVTSIRVPD SVMGLKRTHS SAQPALKGLR FLDKTAAGKD GWKSVEKRFD EMSADGRLHQ ENFAKCIGMA DSKEFAGEVF VAMARRRKIE PDQGITKEQL
0301: KEFWEEMSDN NFDARLRIFF DMCDKNGDGK LTEDEVKEVS KQTTVLGSAC QTLQISEFSF HAQIIVLSAS ANKLANLKKH AATYASLIME ELDPDGRGHI
0401: EIWQLEKLLR KMVMADGSQD QMDQASTSLA KTMVPSSHRS PMQKRIHTTV ELIHENWKRI WVLTLWGIAN FGLFMFKFIQ YRNREVFEVM GYCVCIAKGA
0501: AETTKLNMAL ILLPVCRNTL TSLRSTVLST VVPFDDNINF HKVIALAIAI GASMHTIAHL TCDFPRLVSC PSDKFQQTLG PFFNYVQPTW GTLVTSTPGW
0601: TGILLILIMS FSFTLATHSF RRSVVKLPSP LHHLAGFNSF WYAHHLLVFA YILLVMHSYF LFLTREWYKK TGWMYIAVPV IFYASERATR RVREKNYGVT
0701: VIKAAIYPGN VLSLYMKKPS NFKYKSGMYL FVKCPDVSPF EWHPFSITSA PGDDYLSVHI RTLGDWTTEL RNLFGKACEA EVSSKKATLS RLETTVIAEG
0801: PEENTRFPKI FVDGPFGAPA QNYKKYDILF LIGLGIGATP FISILKDLLH NIKSNKEQQS MHDEEVGSAF KSNGPSRAYF YWVTREQGSF EWFKGVMNEV
0901: AECDNDNAIE MHNYLTSVYE EGDARSALIA MVQSLQHAKN GLDIVSGSKI RTHFARPNWR KVYSDLANTH KNARIGVFYC GSPTLTKTLR ELAIEFSHTT
1001: TTRFHFHKEN F
0101: CSATAKIGAT PLRNTRHSSP RFLLPSPLRL PTFQIYVRPP AASHRAVVPS PVRAMASSSE GYVDVPLGGE QPPQQQQQQH SGPVMRKQPS RLASGMKRLA
0201: SRVTSIRVPD SVMGLKRTHS SAQPALKGLR FLDKTAAGKD GWKSVEKRFD EMSADGRLHQ ENFAKCIGMA DSKEFAGEVF VAMARRRKIE PDQGITKEQL
0301: KEFWEEMSDN NFDARLRIFF DMCDKNGDGK LTEDEVKEVS KQTTVLGSAC QTLQISEFSF HAQIIVLSAS ANKLANLKKH AATYASLIME ELDPDGRGHI
0401: EIWQLEKLLR KMVMADGSQD QMDQASTSLA KTMVPSSHRS PMQKRIHTTV ELIHENWKRI WVLTLWGIAN FGLFMFKFIQ YRNREVFEVM GYCVCIAKGA
0501: AETTKLNMAL ILLPVCRNTL TSLRSTVLST VVPFDDNINF HKVIALAIAI GASMHTIAHL TCDFPRLVSC PSDKFQQTLG PFFNYVQPTW GTLVTSTPGW
0601: TGILLILIMS FSFTLATHSF RRSVVKLPSP LHHLAGFNSF WYAHHLLVFA YILLVMHSYF LFLTREWYKK TGWMYIAVPV IFYASERATR RVREKNYGVT
0701: VIKAAIYPGN VLSLYMKKPS NFKYKSGMYL FVKCPDVSPF EWHPFSITSA PGDDYLSVHI RTLGDWTTEL RNLFGKACEA EVSSKKATLS RLETTVIAEG
0801: PEENTRFPKI FVDGPFGAPA QNYKKYDILF LIGLGIGATP FISILKDLLH NIKSNKEQQS MHDEEVGSAF KSNGPSRAYF YWVTREQGSF EWFKGVMNEV
0901: AECDNDNAIE MHNYLTSVYE EGDARSALIA MVQSLQHAKN GLDIVSGSKI RTHFARPNWR KVYSDLANTH KNARIGVFYC GSPTLTKTLR ELAIEFSHTT
1001: TTRFHFHKEN F
001: MKSNTPTEDS TKWMLESVEI DSMGESSSKE PEINLNKNEG GLKKNASRNL GVGSIIRTLS VSNWRKSGNL GSPSTRKSGN LGPPTNAVPK KTGPQRVERT
101: TSSAARGLQS LRFLDRTVTG RERDAWRSIE NRFNQFSVDG KLPKEKFGVC IGMGDTMEFA AEVYEALGRR RQIETENGID KEQLKLFWED MIKKDLDCRL
201: QIFFDMCDKN GDGKLTEEEV KEVIVLSASA NRLGNLKKNA AAYASLIMEE LDPDHKGYIE MWQLEILLTG MVTNADTEKM KKSQTLTRAM IPERYRTPMS
301: KYVSVTAELM HENWKKLWVL ALWAIINVYL FMWKYEEFMR NPLYNITGRC VCAAKGAAET LKLNMALILV PVCRKTLTIL RSTFLNRVVP FDDNINFHKV
401: IAYMIAFQAL LHTALHIFCN YPRLSSCSYD VFLTYAGAAL GNTQPSYLGL MLTSVSITGV LMIFFMGFSF TLAMHYFRRN IVKLPKPFNV LAGFNAFWYA
501: HHLLVLAYIL LIIHGYYLII EKPWYQKTTW MYLAVPMLFY ASERLFSRLL QEHSHRVNVI KAIVYSGNVL ALYVTKPPGF KYKSGMYMFV KCPDLSKFEW
601: HPFSITSAPG DDYLSVHIRA LGDWTTELRS RFAKTCEPTQ AAAKPKPNSL MRMETRAAGV NPHIEESQVL FPKIFIKGPY GAPAQNYQKF DILLLVGLGI
701: GATPFISILK DMLNHLKPGI PRSGQKYEGS VGGESIGGDS VSGGGGKKFP QRAYFFWVTR EQASFDWFKG VMDDIAEYDK THVIEMHNYL TSMYEAGDAR
801: SALIAMVQKL QHAKNGVDIV SESRIRTHFA RPNWRKVFSE LSSKHEACRI GVFYCGSPTL VRPLKELCQE FSLESSTRFT FHKENF
101: TSSAARGLQS LRFLDRTVTG RERDAWRSIE NRFNQFSVDG KLPKEKFGVC IGMGDTMEFA AEVYEALGRR RQIETENGID KEQLKLFWED MIKKDLDCRL
201: QIFFDMCDKN GDGKLTEEEV KEVIVLSASA NRLGNLKKNA AAYASLIMEE LDPDHKGYIE MWQLEILLTG MVTNADTEKM KKSQTLTRAM IPERYRTPMS
301: KYVSVTAELM HENWKKLWVL ALWAIINVYL FMWKYEEFMR NPLYNITGRC VCAAKGAAET LKLNMALILV PVCRKTLTIL RSTFLNRVVP FDDNINFHKV
401: IAYMIAFQAL LHTALHIFCN YPRLSSCSYD VFLTYAGAAL GNTQPSYLGL MLTSVSITGV LMIFFMGFSF TLAMHYFRRN IVKLPKPFNV LAGFNAFWYA
501: HHLLVLAYIL LIIHGYYLII EKPWYQKTTW MYLAVPMLFY ASERLFSRLL QEHSHRVNVI KAIVYSGNVL ALYVTKPPGF KYKSGMYMFV KCPDLSKFEW
601: HPFSITSAPG DDYLSVHIRA LGDWTTELRS RFAKTCEPTQ AAAKPKPNSL MRMETRAAGV NPHIEESQVL FPKIFIKGPY GAPAQNYQKF DILLLVGLGI
701: GATPFISILK DMLNHLKPGI PRSGQKYEGS VGGESIGGDS VSGGGGKKFP QRAYFFWVTR EQASFDWFKG VMDDIAEYDK THVIEMHNYL TSMYEAGDAR
801: SALIAMVQKL QHAKNGVDIV SESRIRTHFA RPNWRKVFSE LSSKHEACRI GVFYCGSPTL VRPLKELCQE FSLESSTRFT FHKENF
Arabidopsis Description
RBOHHPutative respiratory burst oxidase homolog protein H [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.