Factsheet for TraesCS1D01G289300.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G290700.2	Wheat	mitochondrion	98.38	98.38
TraesCS1B01G300000.2	Wheat	mitochondrion	98.38	88.43
Os05t0465800-01	Rice	plasma membrane	81.62	79.73
Zm00001d009349_P004	Maize	plastid	81.75	79.56
KXG32613	Sorghum	cytosol, plastid	81.88	79.2
Zm00001d040974_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	81.12	77.08
HORVU1Hr1G071340.13	Barley	mitochondrion, peroxisome, plastid	93.25	73.79
TraesCS3D01G347900.2	Wheat	cytosol	74.38	70.25
GSMUA_AchrUn_...	Banana	cytosol	20.0	70.18
GSMUA_AchrUn_...	Banana	cytosol	35.25	64.38
PGSC0003DMT400040179	Potato	cytosol	59.12	60.95
Solyc06g075570.1.1	Tomato	cytosol	61.62	59.4
VIT_06s0004g03790.t01	Wine grape	nucleus	62.88	59.04
CDX86059	Canola	peroxisome, plasma membrane, plastid	28.62	58.57
PGSC0003DMT400078138	Potato	cytosol, nucleus, plastid	61.0	58.51
Solyc11g072800.1.1	Tomato	cytosol	58.88	57.72
KRH49079	Soybean	cytosol	60.38	56.23
AT5G60010.1	Thale cress	cytosol	58.5	52.82
Bra020270.1-P	Field mustard	cytosol	58.25	52.71
CDY09233	Canola	cytosol	58.25	52.71
Bra038274.1-P	Field mustard	cytosol	54.62	50.0
AT3G45810.1	Thale cress	cytosol	56.5	49.56
TraesCS4D01G352200.3	Wheat	cytosol	51.12	48.29
CDX99140	Canola	cytosol, peroxisome, plasma membrane	48.25	45.73
TraesCS3D01G187300.2	Wheat	cytosol	51.38	45.67
TraesCS3D01G279900.1	Wheat	mitochondrion	53.75	45.45
TraesCS4D01G324800.1	Wheat	cytosol	52.12	45.42
TraesCS1D01G350600.1	Wheat	mitochondrion	54.12	44.73
TraesCS5D01G306400.1	Wheat	cytosol	51.12	44.6
TraesCS5D01G105900.1	Wheat	cytosol	48.12	44.51
TraesCS6D01G164500.1	Wheat	mitochondrion, plasma membrane	50.38	42.42
TraesCS5D01G222100.1	Wheat	mitochondrion	52.0	41.85
TraesCS1D01G285000.1	Wheat	cytosol	43.75	38.55
TraesCS1D01G283600.1	Wheat	cytosol, peroxisome, plasma membrane	38.5	38.02
TraesCS1D01G284800.1	Wheat	plastid	47.12	37.74
TraesCS1D01G284900.1	Wheat	cytosol	45.88	31.64
TraesCS2D01G393700.1	Wheat	plasma membrane	14.5	16.07
TraesCS2D01G311100.1	Wheat	plasma membrane	14.25	15.26

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114
InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030
PFAM:PF08414	PFAM:PF13405	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF54	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G289300	EnsemblPlants:TraesCS1D01G289300.2	TIGR:cd06186	SEG:seg	:

Description

No Description!

Coordinates

chr1D:+:387423649..387427560

Molecular Weight (calculated)

91048.8 Da

IEP (calculated)

9.265

GRAVY (calculated)

-0.222

Length

800 amino acids

Sequence
(BLAST)

001: MRKQPSRLTS GMKRLASRVT SFRVPDMGLK RTHSSAQPAL KGLRFLDKTA AGKDGWKSVE KRFDEMSADG RLHQENFAKC IGMADSKEFA SEVFMAMARR
101: RKIDPEQGFT KEQLQECWEE MSDNNFDARL RIFFDMCDKN GDGKLTEDEV KEIIVLSAGA NKLAKLKKHA ATYASLIMEE LDPDARGYIE IWQLEKLLRK
201: MVMEEGSQDQ MDQASTSLAK TMVPSSHRSP MQKQIHETVD FIHENWKRIW FLTLWGIANI ALFIFKFIQY RNRAVFEVMG YCVCIAKGAA ETTKLNMALI
301: LLPVCRNTLT ALRSTALSSV IPFDDNINFH KVIAVGIAIG AGMHTVVHLT CDFPRLVSCP SDKFQEKLGP FFNYVQPTWG TLIASTPGWT GILLVLIMSF
401: SFTLATHSFR RSVVKLPSPF HHLAGFNSFW YAHHLLVFAY ILLVMHSYYL FLTKPWYKKT GWMYIAVPVI FYASERATRR VREKNYGVTV IKAAIYPGNV
501: LSLYMKKPSS FKYKSGMYLF VKCPDVSPFE WHPFSITSAP GDDYLSVHIR TLGDWTTELR NLFGKACEEE VNSKKATLSR LETTVIAEGA EENTKFPKIF
601: VDGPFGAPAQ NYKKYDILFL IGLGIGATPF ISILKDLLHN IKSNNEQQSM NDEEAGSSFK SNGPSRAYFY WVTREQGSFE WFKGVMNEVA ECDTDNAIEM
701: HNYLTSVYEE GDARSALIAM VQSLQHAKNG VDIVSGSKIR THFARPNWRK VYSDMANTHK NARIGVFYCG SPTLTKTLRE LAIEFSHTTT TRFHFHKENF

Best Arabidopsis Sequence Match ( AT5G60010.1 )
(BLAST)

001: MKSNTPTEDS TKWMLESVEI DSMGESSSKE PEINLNKNEG GLKKNASRNL GVGSIIRTLS VSNWRKSGNL GSPSTRKSGN LGPPTNAVPK KTGPQRVERT
101: TSSAARGLQS LRFLDRTVTG RERDAWRSIE NRFNQFSVDG KLPKEKFGVC IGMGDTMEFA AEVYEALGRR RQIETENGID KEQLKLFWED MIKKDLDCRL
201: QIFFDMCDKN GDGKLTEEEV KEVIVLSASA NRLGNLKKNA AAYASLIMEE LDPDHKGYIE MWQLEILLTG MVTNADTEKM KKSQTLTRAM IPERYRTPMS
301: KYVSVTAELM HENWKKLWVL ALWAIINVYL FMWKYEEFMR NPLYNITGRC VCAAKGAAET LKLNMALILV PVCRKTLTIL RSTFLNRVVP FDDNINFHKV
401: IAYMIAFQAL LHTALHIFCN YPRLSSCSYD VFLTYAGAAL GNTQPSYLGL MLTSVSITGV LMIFFMGFSF TLAMHYFRRN IVKLPKPFNV LAGFNAFWYA
501: HHLLVLAYIL LIIHGYYLII EKPWYQKTTW MYLAVPMLFY ASERLFSRLL QEHSHRVNVI KAIVYSGNVL ALYVTKPPGF KYKSGMYMFV KCPDLSKFEW
601: HPFSITSAPG DDYLSVHIRA LGDWTTELRS RFAKTCEPTQ AAAKPKPNSL MRMETRAAGV NPHIEESQVL FPKIFIKGPY GAPAQNYQKF DILLLVGLGI
701: GATPFISILK DMLNHLKPGI PRSGQKYEGS VGGESIGGDS VSGGGGKKFP QRAYFFWVTR EQASFDWFKG VMDDIAEYDK THVIEMHNYL TSMYEAGDAR
801: SALIAMVQKL QHAKNGVDIV SESRIRTHFA RPNWRKVFSE LSSKHEACRI GVFYCGSPTL VRPLKELCQE FSLESSTRFT FHKENF

Arabidopsis Description

RBOHHPutative respiratory burst oxidase homolog protein H [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.