Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5A01G301700.1 | Wheat | cytosol | 98.91 | 98.59 |
TraesCS5B01G299000.1 | Wheat | cytosol | 98.58 | 98.47 |
TraesCS4D01G324800.1 | Wheat | cytosol | 84.73 | 84.64 |
GSMUA_Achr6P11760_001 | Banana | golgi | 35.44 | 79.66 |
Zm00001d052653_P003 | Maize | cytosol, plastid | 81.13 | 76.62 |
Os11t0537400-01 | Rice | plasma membrane | 3.6 | 75.0 |
GSMUA_Achr6P16270_001 | Banana | cytosol | 67.18 | 71.54 |
GSMUA_Achr2P21340_001 | Banana | cytosol, peroxisome, plasma membrane | 63.9 | 70.26 |
GSMUA_Achr10P... | Banana | cytosol | 70.23 | 70.08 |
OQU83587 | Sorghum | plastid | 80.48 | 68.4 |
GSMUA_Achr6P11770_001 | Banana | cytosol | 29.66 | 67.66 |
Zm00001d007421_P004 | Maize | cytosol | 69.36 | 67.09 |
Zm00001d007430_P002 | Maize | cytosol | 58.02 | 64.72 |
PGSC0003DMT400036734 | Potato | cytosol, nucleus, plasma membrane | 65.87 | 64.39 |
Solyc03g117980.2.1 | Tomato | nucleus | 65.65 | 64.18 |
VIT_01s0150g00440.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 64.67 | 64.18 |
Bra037520.1-P | Field mustard | cytosol | 64.12 | 63.77 |
Bra020724.1-P | Field mustard | cytosol, nucleus, plasma membrane, plastid | 64.01 | 63.74 |
KRH63901 | Soybean | cytosol, nucleus, plasma membrane | 63.8 | 63.04 |
Solyc06g068680.2.1 | Tomato | cytosol | 58.67 | 62.78 |
AT5G51060.1 | Thale cress | cytosol | 61.83 | 62.65 |
AT5G47910.1 | Thale cress | cytosol, peroxisome, plasma membrane | 62.81 | 62.54 |
KRH54051 | Soybean | cytosol, nucleus, plasma membrane | 63.58 | 61.96 |
Bra029194.1-P | Field mustard | cytosol | 61.29 | 61.76 |
VIT_01s0150g00450.t01 | Wine grape | cytosol | 61.72 | 61.32 |
TraesCS1D01G284800.1 | Wheat | plastid | 66.74 | 61.26 |
TraesCS4D01G352200.3 | Wheat | cytosol | 56.38 | 61.04 |
KRH41026 | Soybean | mitochondrion | 59.0 | 60.92 |
Zm00001d007426_P001 | Maize | cytosol, plastid | 65.65 | 60.5 |
KRH59706 | Soybean | cytosol | 58.89 | 60.13 |
VIT_19s0014g02830.t01 | Wine grape | cytosol | 54.63 | 59.64 |
TraesCS5D01G105900.1 | Wheat | cytosol | 55.62 | 58.96 |
TraesCS3D01G187300.2 | Wheat | cytosol | 57.47 | 58.56 |
AT4G25090.1 | Thale cress | cytosol | 53.87 | 58.19 |
AT5G07390.1 | Thale cress | cytosol | 57.03 | 57.98 |
Bra009266.1-P | Field mustard | cytosol | 56.49 | 57.43 |
Bra019191.1-P | Field mustard | cytosol, nucleus, plasma membrane | 51.58 | 56.78 |
TraesCS1D01G285000.1 | Wheat | cytosol | 56.05 | 56.61 |
Bra019189.1-P | Field mustard | cytosol, nucleus, plasma membrane | 50.27 | 55.34 |
TraesCS3D01G279900.1 | Wheat | mitochondrion | 53.54 | 51.9 |
TraesCS1D01G350600.1 | Wheat | mitochondrion | 54.63 | 51.76 |
TraesCS1D01G289300.2 | Wheat | mitochondrion | 44.6 | 51.12 |
TraesCS1D01G284900.1 | Wheat | cytosol | 64.56 | 51.03 |
TraesCS3D01G347900.2 | Wheat | cytosol | 45.8 | 49.59 |
Bra011911.1-P | Field mustard | cytosol | 34.24 | 48.76 |
TraesCS6D01G164500.1 | Wheat | mitochondrion, plasma membrane | 49.73 | 48.0 |
TraesCS5D01G222100.1 | Wheat | mitochondrion | 51.47 | 47.48 |
TraesCS1D01G283600.1 | Wheat | cytosol, peroxisome, plasma membrane | 34.57 | 39.14 |
CDY22645 | Canola | cytosol | 9.6 | 38.94 |
Bra013862.1-P | Field mustard | cytosol | 10.91 | 38.61 |
VIT_03s0063g00950.t01 | Wine grape | extracellular, vacuole | 8.72 | 37.56 |
TraesCS2D01G393700.1 | Wheat | plasma membrane | 13.85 | 17.59 |
TraesCS2D01G311100.1 | Wheat | plasma membrane | 13.63 | 16.73 |
Protein Annotations
Gene3D:1.10.238.10 | MapMan:10.1.1 | Gene3D:2.40.30.10 | Gene3D:3.40.50.80 | InterPro:Cyt_b245_heavy_chain | InterPro:EF-hand-dom_pair |
InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:FAD-bd_8 | InterPro:Fd_Rdtase_FAD-bd | InterPro:Fe3_Rdtase_TM_dom | InterPro:Fe_red_NAD-bd_6 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0050664 | GO:GO:0055114 |
InterPro:IPR002048 | InterPro:IPR017927 | InterPro:NADPH_Ox | PFAM:PF01794 | PFAM:PF08022 | PFAM:PF08030 |
PFAM:PF08414 | PRINTS:PR00466 | ScanProsite:PS00018 | PFscan:PS50222 | PFscan:PS51384 | PANTHER:PTHR11972 |
PANTHER:PTHR11972:SF64 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF47473 | SUPFAM:SSF52343 | SUPFAM:SSF63380 | TMHMM:TMhelix |
EnsemblPlantsGene:TraesCS5D01G306400 | EnsemblPlants:TraesCS5D01G306400.1 | TIGR:cd00051 | TIGR:cd06186 | SEG:seg | : |
Description
No Description!
Coordinates
chr5D:+:402950923..402953676
Molecular Weight (calculated)
102644.0 Da
IEP (calculated)
9.565
GRAVY (calculated)
-0.261
Length
917 amino acids
Sequence
(BLAST)
(BLAST)
001: MHNHGGGGGA GDIVEAGGER VVPHSGPLVG KRSATRKSAR FADSVSAPLR RGNHHQADDD DNDYVEVTLD VRDDSVAVHS VKPAAGGEED PDVTLLARAL
101: ETRSSSYGGR GPHGGGVLRN ASTRIKQVSQ ELRKIASVKH RPSRIDRSKS AAAHALKGLK FISRPDGWPA VEKRFDELAE NGGLLHRSKF GKCIGMKELA
201: FAGELFDALA RRRDISGDSI SKAELLEFWD QISDTSFDSR LQTFFDMVDK DADGRITEAE VGQIIGLSAA ANDLKKITER TEEYARLIME ELDPDNLGYI
301: ELSNLETLLL QAPPTQPTRG GSGTTSSRNL SQMLSQHLKP TTEPNPLRRW YRRASYFLED NWRRCWVIIM WFSICAGLFA WKFVQYRRRA VFEVMGYCVC
401: VAKGGAETLK FNMALVLLPV CRNTITWLRN RTAAGRVVPF DDNLNFHKVI AAGITVGAGM HIISHLACDF PRLLHATEEE YEPMKPFFGD VKPPNYWWFV
501: KGTEGWTGLV MLALMAVAFT LATPWFRRGR VRLPGPLSRL TGFNAFWYTH HLFIIVYALL IVHGHFLYLT KKWQKKSTWM YLAAPMVLYA CERLARALRS
601: SVRPVKILKV AVYPGNVLSL RFSKPQGFRC KSGQYIFVNC AAVSPFQWHP FSITSAPHDD YISVHIRTLG DWTRELKSVF EKVCRPPTDG KSGLLRAEYA
701: GDGGAMPSPS SFPTVLIDGP YGAPAQDYKQ YDVVLLVGLG IGATPMISII KDIINNMKRL DGDIESGSPS DRSVSAASFR TRRAYFYWVT REEGSFDWFR
801: GVMDEVAESD KKGIIELHNY CTSVYEEGDA RSALIAMLQS LNHAKHGVDV VSGTRVKTHF ARPNWRKVYK DIALKHAGQR VGVFYCGAPV LIKELRQLAQ
901: DFSRKTSTKF EFHKENF
101: ETRSSSYGGR GPHGGGVLRN ASTRIKQVSQ ELRKIASVKH RPSRIDRSKS AAAHALKGLK FISRPDGWPA VEKRFDELAE NGGLLHRSKF GKCIGMKELA
201: FAGELFDALA RRRDISGDSI SKAELLEFWD QISDTSFDSR LQTFFDMVDK DADGRITEAE VGQIIGLSAA ANDLKKITER TEEYARLIME ELDPDNLGYI
301: ELSNLETLLL QAPPTQPTRG GSGTTSSRNL SQMLSQHLKP TTEPNPLRRW YRRASYFLED NWRRCWVIIM WFSICAGLFA WKFVQYRRRA VFEVMGYCVC
401: VAKGGAETLK FNMALVLLPV CRNTITWLRN RTAAGRVVPF DDNLNFHKVI AAGITVGAGM HIISHLACDF PRLLHATEEE YEPMKPFFGD VKPPNYWWFV
501: KGTEGWTGLV MLALMAVAFT LATPWFRRGR VRLPGPLSRL TGFNAFWYTH HLFIIVYALL IVHGHFLYLT KKWQKKSTWM YLAAPMVLYA CERLARALRS
601: SVRPVKILKV AVYPGNVLSL RFSKPQGFRC KSGQYIFVNC AAVSPFQWHP FSITSAPHDD YISVHIRTLG DWTRELKSVF EKVCRPPTDG KSGLLRAEYA
701: GDGGAMPSPS SFPTVLIDGP YGAPAQDYKQ YDVVLLVGLG IGATPMISII KDIINNMKRL DGDIESGSPS DRSVSAASFR TRRAYFYWVT REEGSFDWFR
801: GVMDEVAESD KKGIIELHNY CTSVYEEGDA RSALIAMLQS LNHAKHGVDV VSGTRVKTHF ARPNWRKVYK DIALKHAGQR VGVFYCGAPV LIKELRQLAQ
901: DFSRKTSTKF EFHKENF
001: MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F
Arabidopsis Description
RBOHDRespiratory burst oxidase homolog protein D [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ0]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.