Factsheet for TraesCS5A01G301700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G306400.1	Wheat	cytosol	98.59	98.91
TraesCS5B01G299000.1	Wheat	cytosol	97.93	98.15
TraesCS5A01G499900.1	Wheat	cytosol	84.24	84.33
GSMUA_Achr6P11760_001	Banana	golgi	35.11	79.17
Zm00001d052653_P003	Maize	cytosol, plastid	80.98	76.72
Os11t0537400-01	Rice	plasma membrane	3.59	75.0
GSMUA_Achr6P16270_001	Banana	cytosol	66.85	71.43
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	63.59	70.14
GSMUA_Achr10P...	Banana	cytosol	70.0	70.08
OQU83587	Sorghum	plastid	80.43	68.58
GSMUA_Achr6P11770_001	Banana	cytosol	29.57	67.66
Zm00001d007421_P004	Maize	cytosol	69.46	67.41
TraesCS1A01G285700.1	Wheat	cytosol	66.09	65.1
Zm00001d007430_P002	Maize	cytosol	57.93	64.84
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	65.76	64.5
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	64.67	64.39
Solyc03g117980.2.1	Tomato	nucleus	65.54	64.29
Bra037520.1-P	Field mustard	cytosol	64.24	64.1
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	64.02	63.95
KRH63901	Soybean	cytosol, nucleus, plasma membrane	63.91	63.36
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	62.93	62.87
Solyc06g068680.2.1	Tomato	cytosol	58.48	62.78
AT5G51060.1	Thale cress	cytosol	61.63	62.65
KRH54051	Soybean	cytosol, nucleus, plasma membrane	63.59	62.17
Bra029194.1-P	Field mustard	cytosol	60.98	61.65
VIT_01s0150g00450.t01	Wine grape	cytosol	61.63	61.43
TraesCS5A01G527600.1	Wheat	cytosol	56.41	61.28
KRH41026	Soybean	mitochondrion	59.02	61.15
Zm00001d007426_P001	Maize	cytosol, plastid	65.76	60.8
KRH59706	Soybean	cytosol	58.91	60.36
VIT_19s0014g02830.t01	Wine grape	cytosol	54.57	59.76
TraesCS1A01G357100.1	Wheat	cytosol	41.74	58.99
AT4G25090.1	Thale cress	cytosol	53.7	58.19
TraesCS3A01G182900.1	Wheat	cytosol	56.96	58.16
AT5G07390.1	Thale cress	cytosol	56.85	57.98
TraesCS5A01G093600.1	Wheat	cytosol	55.22	57.92
Bra009266.1-P	Field mustard	cytosol	56.41	57.54
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	51.52	56.9
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	50.22	55.46
TraesCS1A01G347700.1	Wheat	mitochondrion	54.02	51.72
TraesCS1A01G290700.2	Wheat	mitochondrion	44.78	51.5
TraesCS3A01G280200.1	Wheat	mitochondrion	53.7	50.61
TraesCS3A01G354200.2	Wheat	cytosol	45.87	49.59
Bra011911.1-P	Field mustard	cytosol	34.24	48.91
TraesCS6A01G180600.1	Wheat	mitochondrion	49.46	47.59
TraesCS5A01G211800.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	50.43	46.92
TraesCS1A01G284600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	34.46	40.03
Bra013862.1-P	Field mustard	cytosol	10.87	38.61
CDY22645	Canola	cytosol	9.46	38.5
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	8.59	37.09
TraesCS2A01G312600.1	Wheat	plasma membrane	13.8	16.98
TraesCS2A01G396000.1	Wheat	plasma membrane	13.91	16.49

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	ncoils:Coil	InterPro:Cyt_b245_heavy_chain
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom
InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0050664
GO:GO:0055114	InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022
PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5A01G301700	EnsemblPlants:TraesCS5A01G301700.1	TIGR:cd00051	TIGR:cd06186	SEG:seg

Description

No Description!

Coordinates

chr5A:-:510541847..510544609

Molecular Weight (calculated)

102807.0 Da

IEP (calculated)

9.657

GRAVY (calculated)

-0.256

Length

920 amino acids

Sequence
(BLAST)

001: MHNHGGGGAG DIVQAGGERV VPHSGPLVGK RSATRKSARF ADSVSAPLRA GGRGNHHQGD DDDNDYVEVT LDVRDDSVAV HSVKPAAGGE EDPDVTLLAR
101: ALETRSSSYA GRGTHGGGVL RNASTRIKQV SQELRKIASV KRRPSRIDRS KSAAAHALKG LKFISKPDGW PAVEKRFDEL AENGGLLHRS KFGKCIGMKE
201: LAFAGELFDA LARRRDISGD SISKAELLEF WDQISDTSFD SRLQTFFDMV DKDADGRITE AEVGQIIGLS AAANDLKKIT ERTEEYARLI MEELDPDNLG
301: YIELSNLETL LLQAPPTQPT RGGSGTTSSR NLSQMLSQHL KPTTEPNPLR RWYRRASYFL EDNWRRCWVI ILWFSICAGL FAWKFVQYRR RAVFEVMGYC
401: VCVAKGGAET LKFNMALVLL PVCRNTITWL RNRTAAGRVV PFDDNLNFHK VIAAGITVGA GMHIISHLAC DFPRLLHATE EEYEPMKPFF GDVKPPNYWW
501: FVKGTEGWTG LVMLALMAVA FTLATPWFRR GRVRLPGPLS RLTGFNAFWY THHLFIIVYA LLIVHGHFLY LTKKWQKKST WMYLAAPMVM YACERLARAL
601: RSSVRPVKIL KVAVYPGNVL SLRFSKPQGF RCKSGQYIFV NCAAVSPFQW HPFSITSAPH DDYISVHIRT LGDWTRELKS VFEKVCRPPT DGKSGLLRAE
701: YAGDGGAAMP SPSSFPTVLI DGPYGAPAQD YKQYDVVLLV GLGIGATPMI SIIKDIINNM KRLDGDIESG SPGDRSVSAA SFRTRRAYFY WVTREEGSFD
801: WFRGVMDEVA ESDKKGIIEL HNYCTSVYEE GDARSALIAM LQSLNHAKHG VDVVSGTRVK THFARPNWRK VYKDIALKHA GQRVGVFYCG APVLIKELRQ
901: LAQDFSRKTS TKFEFHKENF

Best Arabidopsis Sequence Match ( AT5G47910.1 )
(BLAST)

001: MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F

Arabidopsis Description

RBOHDRespiratory burst oxidase homolog protein D [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.