Factsheet for GSMUA_Achr10P12340_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P16270_001	Banana	cytosol	82.48	88.04
GSMUA_Achr10P...	Banana	plasma membrane	48.86	86.18
GSMUA_Achr6P11760_001	Banana	golgi	37.76	85.05
GSMUA_Achr6P11770_001	Banana	cytosol	33.08	75.62
Os11t0537400-01	Rice	plasma membrane	3.59	75.0
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	68.01	74.94
GSMUA_Achr10P...	Banana	nucleus, plastid	22.74	74.91
TraesCS4D01G324800.1	Wheat	cytosol	72.36	72.44
TraesCS5A01G499900.1	Wheat	cytosol	72.03	72.03
TraesCS4B01G327800.2	Wheat	cytosol	71.82	71.97
TraesCS5B01G299000.1	Wheat	cytosol	70.29	70.37
TraesCS5D01G306400.1	Wheat	cytosol	70.08	70.23
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	63.66	70.14
TraesCS5A01G301700.1	Wheat	cytosol	70.08	70.0
Zm00001d052653_P003	Maize	cytosol, plastid	73.67	69.72
HORVU4Hr1G081670.1	Barley	cytosol	72.25	67.96
Solyc03g117980.2.1	Tomato	nucleus	68.44	67.06
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	67.25	66.88
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	68.23	66.84
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	65.61	65.47
Bra037520.1-P	Field mustard	cytosol	65.51	65.29
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	64.96	64.82
Solyc06g068680.2.1	Tomato	cytosol	60.39	64.76
VIT_01s0150g00450.t01	Wine grape	cytosol	64.2	63.92
KRH63901	Soybean	cytosol, nucleus, plasma membrane	64.42	63.79
AT5G51060.1	Thale cress	cytosol	62.24	63.2
Zm00001d007421_P004	Maize	cytosol	64.96	62.97
KRH54051	Soybean	cytosol, nucleus, plasma membrane	64.42	62.91
Bra029194.1-P	Field mustard	cytosol	62.24	62.86
OQU83587	Sorghum	plastid	73.34	62.47
KRH41026	Soybean	mitochondrion	60.28	62.39
KRH59706	Soybean	cytosol	59.96	61.36
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome	19.7	61.36
TraesCS1B01G295100.1	Wheat	plasma membrane	45.27	60.91
VIT_19s0014g02830.t01	Wine grape	cytosol	55.6	60.83
AT4G25090.1	Thale cress	cytosol	55.93	60.54
Zm00001d007430_P002	Maize	cytosol	53.54	59.85
HORVU1Hr1G072160.5	Barley	cytosol	60.28	59.25
TraesCS1A01G285700.1	Wheat	cytosol	59.19	58.24
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	29.16	58.13
AT5G07390.1	Thale cress	cytosol	57.02	58.09
Bra009266.1-P	Field mustard	cytosol	56.69	57.76
Zm00001d007426_P001	Maize	cytosol, plastid	61.92	57.19
GSMUA_Achr9P05450_001	Banana	mitochondrion	53.97	56.95
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	51.58	56.9
GSMUA_Achr5P29250_001	Banana	cytosol	44.29	56.37
HORVU1Hr1G072140.1	Barley	cytosol	56.69	56.08
TraesCS1A01G357100.1	Wheat	cytosol	39.61	55.91
TraesCS1B01G295300.1	Wheat	cytosol	51.8	55.87
GSMUA_Achr6P31850_001	Banana	mitochondrion	53.54	55.16
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	49.84	54.98
TraesCS1D01G284800.1	Wheat	plastid	59.63	54.85
GSMUA_AchrUn_...	Banana	cytosol	13.38	53.95
HORVU5Hr1G078630.1	Barley	cytosol	55.82	53.16
GSMUA_Achr9P07100_001	Banana	mitochondrion, plasma membrane	31.77	52.52
GSMUA_Achr10P...	Banana	cytosol	47.77	52.01
TraesCS1D01G285000.1	Wheat	cytosol	50.92	51.54
GSMUA_AchrUn_...	Banana	cytosol	24.16	50.68
GSMUA_Achr3P05840_001	Banana	mitochondrion	48.64	50.22
GSMUA_Achr8P23680_001	Banana	mitochondrion	48.1	49.61
Bra011911.1-P	Field mustard	cytosol	34.49	49.22
GSMUA_Achr11P...	Banana	mitochondrion	26.99	47.33
HORVU0Hr1G013380.4	Barley	plastid	40.48	47.33
TraesCS1D01G284900.1	Wheat	cytosol	58.32	46.21
TraesCS1B01G295200.1	Wheat	cytosol	57.78	43.42
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	8.81	38.03
Bra013862.1-P	Field mustard	cytosol	10.55	37.45
CDY22645	Canola	cytosol	8.92	36.28
GSMUA_Achr8P12260_001	Banana	peroxisome	9.36	17.2
GSMUA_Achr11P...	Banana	plasma membrane	13.6	17.1
GSMUA_Achr8P12250_001	Banana	plasma membrane	13.17	17.09
GSMUA_Achr6P28010_001	Banana	plasma membrane, plastid	13.93	16.52
GSMUA_Achr8P12270_001	Banana	plasma membrane	13.06	13.19
GSMUA_Achr8P12300_001	Banana	extracellular, peroxisome, plastid	2.29	9.21

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSMUA_Achr10G12340_001	EnsemblPlants:GSMUA_Achr10P12340_001	EnsemblPlants:GSMUA_Achr10T12340_001
InterPro:IPR002048	InterPro:IPR017927	UniProt:M0RHL0	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022
PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	UniParc:UPI000294A612	SEG:seg	:	:	:

Description

Respiratory burst oxidase homolog protein C [Source:GMGC_GENE;Acc:GSMUA_Achr10G12340_001]

Coordinates

chr10:-:21356037..21361244

Molecular Weight (calculated)

104084.0 Da

IEP (calculated)

9.026

GRAVY (calculated)

-0.205

Length

919 amino acids

Sequence
(BLAST)

001: MGPTEEGRGG ESPTDAIEVE STGGRISFSG PLSGPLNKRG EKSGARDDDD TYVEITLDVR DDTVAVHSVK AAGAGGDAAG DPEVAALARE LERRSAFGAS
101: VMRTASWRFR QVSQELRRLA SFGRRPGAGK FDRSRSAAAQ ALKGLKFISK ADGVAGWAAV ERRFDELAVD GTLDRSKFAQ CIGMKESKEF AGELFDALAR
201: RRQIKGDTIT KAELREFWDQ ISEQSFDSRL QTFFDMVDKN ADGRITEEEV REIISLSASA NNLSKIQDQA EEYAALIMEE LDPDSLGYIE IYNLEMLLLE
301: APGYSAQLGT TNSRNLSQML SQKLRPTREP NPLVRWYHEG RYFLEDHWKR VWVMVLWLCV CASLFAWKFV QYRRRAVFHV MGYCVCVAKG GAETLKFNMA
401: LILLPVCRNT ITWLRTKTKL GKVLPFDDNL NFHKVIAVGV AIGVGLHAIS HLTCDFPRLL HATDQEYDPM KHFFGDTRPN NFWWFVKGTE GWTGVVMVVL
501: MAIAFTLATP WFRRNRLNLP WPLKRLTGFN AFWYSHHLFV IVYVLLIIHG TFIYLSKKWY KKTTWMYLAI PLILYASERL IRALRSSVRA VKILKVAVYP
601: GNVLTLQMSK PQGFKYRSGQ YIFVNCAAVS PFQWHPFSIT SAPQDDYISV HIRTLGDWTR QLKAVFSEVY CAAYCLRYAG IVLVDMAGLS ALFSDLRANV
701: CQPPTSGQSG LLRSDYDSNN NLIFPKVLID GPYGAPAQEY KKYEVVLLVG LGIGATPFIS IVKDIVNNMK QWDPEESSDG DDTRRAYFYW VTREQGSFEW
801: FRGVMNEVAE TDKKGVIELH NFCTSVYEEG DARSALIVML QSLNHAKHGV DIVSGTRVKS HFARPNWRNV YKRIALNHRD QRIGVFYCGA PTLTKELRQL
901: ATDFSRKTST KFDFHKENF

Best Arabidopsis Sequence Match ( AT5G47910.1 )
(BLAST)

001: MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F

Arabidopsis Description

RBOHDRespiratory burst oxidase homolog protein D [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.