Factsheet for GSMUA_Achr5P26970_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33894	Soybean	cytosol	69.78	70.55
GSMUA_Achr10P...	Banana	plasma membrane	43.77	70.06
CDY22644	Canola	plasma membrane	47.72	69.1
KRH68525	Soybean	cytosol	72.66	68.47
KRG96816	Soybean	cytosol	72.3	67.98
KRG92895	Soybean	extracellular, mitochondrion	72.42	67.94
PGSC0003DMT400063688	Potato	cytosol	70.62	67.94
Solyc01g099620.2.1	Tomato	cytosol	70.26	67.75
VIT_14s0060g02320.t01	Wine grape	cytosol	72.18	67.34
GSMUA_Achr6P11760_001	Banana	golgi	32.61	66.67
HORVU4Hr1G086500.1	Barley	cytosol	67.27	66.39
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	65.59	65.59
GSMUA_Achr6P16270_001	Banana	cytosol	67.63	65.51
TraesCS5A01G527600.1	Wheat	cytosol	66.43	65.41
TraesCS4B01G358800.1	Wheat	cytosol	66.31	65.29
TraesCS4D01G352200.3	Wheat	cytosol	66.31	65.29
TraesCS5D01G105900.1	Wheat	cytosol	66.79	64.39
GSMUA_Achr10P...	Banana	cytosol	70.14	63.66
TraesCS5B01G099700.1	Wheat	cytosol	66.55	63.57
Zm00001d040805_P003	Maize	cytosol	68.47	63.52
TraesCS5A01G093600.1	Wheat	cytosol	66.55	63.28
Bra031658.1-P	Field mustard	cytosol	64.03	63.12
AT1G09090.2	Thale cress	cytosol	63.67	62.99
TraesCS3A01G182900.1	Wheat	cytosol	67.75	62.71
Zm00001d009248_P002	Maize	cytosol	67.39	62.65
Zm00001d023859_P001	Maize	plastid	67.75	62.64
TraesCS3D01G187300.2	Wheat	cytosol	67.51	62.56
TraesCS3B01G212900.5	Wheat	cytosol	67.51	62.56
Os12t0541300-01	Rice	plasma membrane	67.87	62.27
Os01t0360200-01	Rice	plasma membrane	67.51	62.21
GSMUA_Achr6P11770_001	Banana	cytosol	29.86	61.94
CDY06348	Canola	cytosol	60.55	61.89
EES16102	Sorghum	plastid	67.87	61.79
OQU86843	Sorghum	cytosol	67.99	61.36
CDY65632	Canola	nucleus, peroxisome	10.55	61.11
HORVU5Hr1G024550.3	Barley	cytosol	61.63	59.84
GSMUA_Achr10P...	Banana	nucleus, plastid	19.18	57.35
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome	19.42	54.92
GSMUA_Achr9P05450_001	Banana	mitochondrion	56.95	54.53
HORVU3Hr1G037600.3	Barley	cytosol, peroxisome, plastid	29.86	54.25
GSMUA_Achr6P31850_001	Banana	mitochondrion	56.71	53.03
GSMUA_Achr5P29250_001	Banana	cytosol	45.44	52.49
GSMUA_AchrUn_...	Banana	cytosol	25.42	48.4
GSMUA_Achr9P07100_001	Banana	mitochondrion, plasma membrane	32.13	48.2
GSMUA_Achr10P...	Banana	cytosol	48.32	47.75
GSMUA_Achr3P05840_001	Banana	mitochondrion	50.6	47.42
GSMUA_AchrUn_...	Banana	cytosol	12.95	47.37
GSMUA_Achr8P23680_001	Banana	mitochondrion	50.0	46.8
GSMUA_Achr11P...	Banana	mitochondrion	28.42	45.23
GSMUA_Achr11P...	Banana	plasma membrane	15.59	17.78
GSMUA_Achr8P12250_001	Banana	plasma membrane	13.91	16.38
GSMUA_Achr8P12260_001	Banana	peroxisome	9.59	16.0
GSMUA_Achr6P28010_001	Banana	plasma membrane, plastid	14.63	15.74
GSMUA_Achr8P12270_001	Banana	plasma membrane	13.67	12.53
GSMUA_Achr8P12300_001	Banana	extracellular, peroxisome, plastid	1.68	6.14

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009408	GO:GO:0009628
GO:GO:0009791	GO:GO:0009845	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016174
GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSMUA_Achr5G26970_001	EnsemblPlants:GSMUA_Achr5P26970_001
EnsemblPlants:GSMUA_Achr5T26970_001	InterPro:IPR002048	InterPro:IPR017927	UniProt:M0T222	InterPro:NADPH_Ox	PFAM:PF01794
PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222
PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF57	InterPro:RBOHB	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473
SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0002955765	SEG:seg	:

Description

Respiratory burst oxidase homolog protein B [Source:GMGC_GENE;Acc:GSMUA_Achr5G26970_001]

Coordinates

chr5:+:27613119..27616821

Molecular Weight (calculated)

94503.3 Da

IEP (calculated)

9.513

GRAVY (calculated)

-0.167

Length

834 amino acids

Sequence
(BLAST)

001: MGSATENGTL RYYFDHESES ESDGGRSVGH SGPLGGPLAS KKAGKKRSAR FKGDDNYVEI TLDVRDDAIA IQSIQSGDPE AALLAKNLER RSPMRLDRTK
101: SSAAQAIKGL QFVAKNVASE GWPQVERRFD ELAVDGVLLR SRFGKCIGMV GSEEFAGEVF DALARRRGIT AAVLTKEELW EFWEQLSDQS FDARLQTFFD
201: MVDKNADGRI TEEEVREIIA LSASANKLSR IQERVEEYTA LIMEELDPNN LGYIELYNLE MLLLQPAVQP SAMLYANSNN LSQMLSQKLV PTKDKNPVRR
301: CCRRISYFME DNWKRVWVMA LWLSICAGLF TWKFIAYRRR AVFHIMGYCV TTAKGGAETL KFNMALILLP VCRNTITWLR SRTKLGVIIP FNDNINFHKV
401: IAAGIVVGVA LHVGAHLTCD FPRLLHATDA EYEPMKPFFG EKRPPNYWWF VKGTEGWTGV VMLVLMVIAY VLAQPWFRRN RLSPTNPLRR LTGFNAFWYS
501: HHLFVIVYVL YVVHGVCLYL IKKWYKKTAW MYLAIPVTLY ACERLLRAFR SGHKTVRIQK VAVYPGNVLA LRMSKPQGFK YRSGQYIFLN CAAVSPFEWH
601: PFSITSAPGD DYLSIHIRTR GDWTSQLRAI FSQVCQPAKS DQSGLLRADV MPGGNNPRLP KLLIDGPYGA PAQDYEHYDV LLLIGLGIGA TPLISIVKDV
701: LNNVEQKKTT AAADWFRGIM NEVAEKDKDG VIELHNHCTS VYEEGDARSA LIVMLQALHH AKNGVDIVSG TRVKTHFARP NWRNVFKRIA INHPNQRVGV
801: FYCGDPMVIG ELRRLSQDFS HKTSTKFVFH KENF

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.