Factsheet for Os12t0541300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G105900.1	Wheat	cytosol	78.0	81.97
TraesCS5B01G099700.1	Wheat	cytosol	78.11	81.33
TraesCS5A01G093600.1	Wheat	cytosol	78.33	81.19
Zm00001d023859_P001	Maize	plastid	78.88	79.49
EES16102	Sorghum	plastid	78.22	77.62
HORVU5Hr1G024550.3	Barley	cytosol	70.74	74.85
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	62.27	67.87
CDY65632	Canola	nucleus, peroxisome	10.56	66.67
KRH33894	Soybean	cytosol	59.19	65.21
CDY22644	Canola	plasma membrane	40.81	64.41
PGSC0003DMT400063688	Potato	cytosol	60.62	63.55
Solyc01g099620.2.1	Tomato	cytosol	60.4	63.47
KRG92895	Soybean	extracellular, mitochondrion	60.51	61.87
KRG96816	Soybean	cytosol	59.3	60.77
VIT_14s0060g02320.t01	Wine grape	cytosol	59.74	60.74
KRH68525	Soybean	cytosol	58.86	60.45
Os01t0360200-01	Rice	plasma membrane	60.18	60.44
Os01t0734466-01	Rice	peroxisome, plasma membrane	34.43	58.4
AT1G09090.2	Thale cress	cytosol	53.91	58.13
Bra031658.1-P	Field mustard	cytosol	53.69	57.68
CDY06348	Canola	cytosol	51.38	57.23
Os11t0537400-01	Rice	plasma membrane	2.53	52.27
Os05t0465800-01	Rice	plasma membrane	43.78	48.6
Os05t0528000-01	Rice	mitochondrion	50.49	48.27
Os01t0835500-01	Rice	cytosol	44.33	47.81
Os09t0438000-01	Rice	mitochondrion	46.64	42.11
Os08t0453700-00	Rice	plastid	35.97	34.42
Os01t0734200-00	Rice	mitochondrion, nucleus	10.01	28.71
Os04t0444800-02	Rice	plasma membrane	13.42	16.09
Os04t0578600-01	Rice	golgi, mitochondrion, vacuole	7.92	16.04

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	EntrezGene:4352439	ProteinID:ABA99453.1
ProteinID:BAT17505.1	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8
InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869
InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	EnsemblPlantsGene:Os12g0541300	EnsemblPlants:Os12t0541300-01	PFAM:PF01794
PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PFAM:PF13405	PRINTS:PR00466	ScanProsite:PS00018
PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF61	UniProt:Q2QP56	InterPro:Riboflavin_synthase-like_b-brl
SMART:SM00054	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0000680EC9
RefSeq:XP_015618608.1	RefSeq:XP_015618609.1	RefSeq:XP_015618610.1	RefSeq:XP_015618611.1	SEG:seg	:

Description

RESPIRATORY BURST OXIDASE HOMOLOG HNADPH oxidase, Respiratory burst oxidase homolog, Ethylene-induced aerenchyma formation in roots under oxygen-deficient conditions (Os12t0541300-01)

Coordinates

chr12:+:21648123..21653555

Molecular Weight (calculated)

102129.0 Da

IEP (calculated)

9.365

GRAVY (calculated)

-0.205

Length

909 amino acids

Sequence
(BLAST)

001: MASREESGNG GGGGATPAAD YRSSDSRSSS RRSTRFKEDN EYVEITLDVK GDDTVAIQSI RNGADMPEVA LLARGLAQQP PPSAAPGPGG LSSRLKAVRT
101: ELRRIASWKF PSGVLSGGGG GGDAPGNGND RRPRLDRSMT GAARALRGLQ FLNSSAVTNG WPEVEKRFER LAVDGFLLRS RFGQCIGMVG SEEFAVQIFD
201: SLARRRGITA QLLTKDQLRE FWEQLSDPGF DAKLQTFFDM VDKNADGQIT EEELKEVLTL TASANKLSKI LERVDEYTAL IMEELDPDQL GYIDISNLES
301: LLLLPPSQAP SKLVTHSSNI SQLISQKLVP THDRNPLRRG LRRLSYFMED NWKRVWVMAL WLAINAGLFT WKFMAYKRHP TFDVMGYCVC VAKGGAETTK
401: FNMALILLPV CRNTITWLRS RTKLGAVIPF NDNINFHKVV AGGVVVGVAL HGVTHLTCDF PRLLHASDAA YEPMKKYFGQ TRIPDYWWFV RGVEGITGVI
501: MVVLMAIAYT LAHPWFRRSK LSDSNPLKRL SGFNMFWYSH HLFVIVYIAF VVHGVCLYIN RTWWKQTTWM YLAIPILLYA GERIFRALRS HGFTTVRIEK
601: VAIYPGNVIA IHMTKPHGFK YKSGQYIYVN CGEVSPFEWH PFTITSAPDD SYLSMHIRCR GDWTSSFRAI FSQICRPPMN GQSGLLRADC MSMEHHSRFP
701: KLLIDGPYGA PAQDYWKYDV LLLIGLGIGA TPLISIVKDV LNHIYDDPES AASPHTTNGG GAAAAARRAF MTKRVYFYWC TREEGSFEWF RGVMNEVADR
801: DAGRELIELH NHCTSVYEEG DARSALVTML QALHHAKNGV DVVSGTRVRT HFARPSWRDV FKRVAVNHQG QRVGVFFCGD QALTPELRRL AQDFSHKTTT
901: KFVFHKENF

Best Arabidopsis Sequence Match ( AT5G51060.1 )
(BLAST)

001: MSRVSFEVSG GYHSDAEAGN SGPMSGGQLP PIYKKPGNSR FTAENSQRTR TAPYVDLTVD VQDDTVSVHS LKMEGGSSVE ESPELTLLKR NRLEKKTTVV
101: KRLASVSHEL KRLTSVSGGI GGRKPPRPAK LDRTKSAASQ ALKGLKFISK TDGGAGWSAV EKRFNQITAT TGGLLLRTKF GECIGMTSKD FALELFDALA
201: RRRNITGEVI DGDQLKEFWE QINDQSFDSR LKTFFDMVDK DADGRLTEDE VREIISLSAS ANNLSTIQKR ADEYAALIME ELDPDNIGYI MLESLETLLL
301: QAATQSVITS TGERKNLSHM MSQRLKPTFN RNPLKRWYRG LRFFLLDNWQ RCWVIVLWFI VMAILFTYKY IQYRRSPVYP VMGDCVCMAK GAAETVKLNM
401: ALILLPVCRN TITWLRNKTR LGRVVPFDDN LNFHKVIAVG IIVGVTMHAG AHLACDFPRL LHATPEAYRP LRQFFGDEQP KSYWHFVNSV EGITGLVMVL
501: LMAIAFTLAT PWFRRGKLNY LPGPLKKLAS FNAFWYTHHL FVIVYILLVA HGYYLYLTRD WHNKTTWMYL VVPVVLYACE RLIRAFRSSI KAVTIRKVAV
601: YPGNVLAIHL SRPQNFKYKS GQYMFVNCAA VSPFEWHPFS ITSAPQDDYL SVHIRVLGDW TRALKGVFSE VCKPPPAGVS GLLRADMLHG ANNPDFPKVL
701: IDGPYGAPAQ DYKKYEVVLL VGLGIGATPM ISIVKDIVNN IKAKEQAQLN RMENGTSEPQ RSKKESFRTR RAYFYWVTRE QGSFDWFKNI MNEVAERDAN
801: RVIEMHNYCT SVYEEGDARS ALIHMLQSLN HAKNGVDIVS GTRVMSHFAK PNWRNVYKRI AMDHPNTKVG VFYCGAPALT KELRHLALDF THKTSTRFSF
901: HKENF

Arabidopsis Description

RBOHCRHD2 [Source:UniProtKB/TrEMBL;Acc:A0A178UIV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.