Factsheet for TraesCS5A01G093600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G105900.1	Wheat	cytosol	96.58	97.92
TraesCS5B01G099700.1	Wheat	cytosol	96.58	97.02
HORVU5Hr1G024550.3	Barley	cytosol	85.29	87.08
Zm00001d023859_P001	Maize	plastid	81.98	79.71
Os12t0541300-01	Rice	plasma membrane	81.19	78.33
EES16102	Sorghum	plastid	81.53	78.06
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	63.28	66.55
KRH33894	Soybean	cytosol	60.21	64.0
CDY65632	Canola	nucleus, peroxisome	10.49	63.89
CDY22644	Canola	plasma membrane	41.51	63.19
TraesCS5A01G527600.1	Wheat	cytosol	59.98	62.1
Solyc01g099620.2.1	Tomato	cytosol	60.78	61.62
PGSC0003DMT400063688	Potato	cytosol	60.78	61.48
KRG92895	Soybean	extracellular, mitochondrion	61.12	60.29
TraesCS3A01G182900.1	Wheat	cytosol	61.92	60.27
KRH68525	Soybean	cytosol	59.86	59.32
KRG96816	Soybean	cytosol	59.75	59.08
VIT_14s0060g02320.t01	Wine grape	cytosol	59.86	58.72
AT1G09090.2	Thale cress	cytosol	55.53	57.77
Bra031658.1-P	Field mustard	cytosol	54.73	56.74
CDY06348	Canola	cytosol	52.11	56.0
TraesCS5A01G499900.1	Wheat	cytosol	58.38	55.71
TraesCS5A01G301700.1	Wheat	cytosol	57.92	55.22
TraesCS1A01G285700.1	Wheat	cytosol	52.22	49.04
TraesCS1A01G290700.2	Wheat	mitochondrion	44.13	48.38
TraesCS1A01G347700.1	Wheat	mitochondrion	52.11	47.55
TraesCS3A01G354200.2	Wheat	cytosol	45.84	47.24
TraesCS3A01G280200.1	Wheat	mitochondrion	51.65	46.41
TraesCS6A01G180600.1	Wheat	mitochondrion	49.26	45.19
TraesCS5A01G211800.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	49.49	43.88
TraesCS1A01G357100.1	Wheat	cytosol	31.47	42.4
TraesCS1A01G284600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	34.09	37.75
TraesCS2A01G396000.1	Wheat	plasma membrane	14.82	16.75
TraesCS2A01G312600.1	Wheat	plasma membrane	14.14	16.58

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114
InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030
PFAM:PF08414	PFAM:PF13405	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF61	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM00054	SUPFAM:SSF47473	SUPFAM:SSF52343
SUPFAM:SSF63380	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5A01G093600	EnsemblPlants:TraesCS5A01G093600.1	TIGR:cd00051	TIGR:cd06186
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:130083315..130087608

Molecular Weight (calculated)

98760.7 Da

IEP (calculated)

9.153

GRAVY (calculated)

-0.210

Length

877 amino acids

Sequence
(BLAST)

001: MERNGNANAG PPLEENKGAD GKSGSRRSTR FKEENEYVEV TLDVGADDAV AVQGVRAAGE TPEAALLPRS GGLSSRLKAE LRRIASAKRG GGDNAPASQP
101: RLDRSMTGAA RALRGLHFLN QSVVTRGSWP EVDKRFDRLA VDGLLLRSRF GQCIGMVGSE EFAAQMYDAL ARRRGVVAQV LTKDELREFW EQLSDPGFDA
201: KLQTFFDMVD KNADGRITEE ELKEVLTLTA SANKLTKILE RVDEYTALIM EELDPDQLGY IEFRLKKTLQ LATLESLLLL PPSQAPTSLV AHSSNISQLI
301: SQRLVPARDA NPLRRGLTAA RYFLEDNWKR VWVMSLWLSI NAGLFAWKFY AYRRHPTFDV MGYCVCVAKG GAETTKFNMA LILLPVCRNT LTWLRSRTSL
401: GAAVPFNDNI NFHKVVAGGV AVGVALHGVT HLTCDFPRLL HASDEAYEPM KRYFGQTRVP DYWWFVRGVE GVTGVLMVVL MAVAYTLAHP RFRRSKLGAG
501: NPLKRLSGFN MFWYSHHLFV VVYVALVVHG VCLYINRTWY KQTTWMYLAV PVLLYAGERL LRALRSHGLT TVRIEKVAVY PGNVIAIHMS KPHGFRYRSG
601: QYIYVNCGEV SPFEWHPFTI TSAPGDDYLS MHIRCRGDWT SRFRAIFSQI CRPPLAGQSG LLRADFTSMV EHNANAKFPR LLIDGPYGAP AQDYRKYDVL
701: LLIGLGIGAT PLISIVKDVL NNVHRQGQEQ EGDEGFMTKR VYFYWCTREE GSFEWFRGVM NEVAERDAAG EESVVELHNH CTSVYEEGDA RSAMVVMLQA
801: LHHAKSGVDV VSGTRVRTHF ARPCWRDVFK RVACDHQGQR VGVFYCGDQK LTPELRRLSQ DFSHRTTTKF VFHKENF

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.