Factsheet for TraesCS5A01G211800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:

peroxisome 1
mitochondrion 2
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G212100.1	Wheat	mitochondrion	96.66	97.06
TraesCS5D01G222100.1	Wheat	mitochondrion	96.87	96.38
HORVU5Hr1G062490.8	Barley	plasma membrane	94.14	94.33
KXG35704	Sorghum	mitochondrion	86.86	85.3
Os09t0438000-01	Rice	mitochondrion	86.55	85.0
GSMUA_Achr3P05840_001	Banana	mitochondrion	70.07	77.87
GSMUA_Achr8P23680_001	Banana	mitochondrion	69.57	77.22
Zm00001d020609_P001	Maize	mitochondrion	55.01	76.73
TraesCS6A01G180600.1	Wheat	mitochondrion	73.91	76.46
Solyc05g025680.1.1	Tomato	plasma membrane	41.56	65.87
VIT_11s0016g00540.t01	Wine grape	cytosol, peroxisome, plastid	60.97	65.76
Solyc07g042460.1.1	Tomato	cytosol	56.83	63.79
PGSC0003DMT400035268	Potato	mitochondrion	59.66	62.77
KRH37549	Soybean	cytosol	58.85	62.72
KRH12608	Soybean	cytosol	58.75	62.07
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	56.83	60.17
PGSC0003DMT400066027	Potato	peroxisome	27.81	60.04
AT1G19230.2	Thale cress	cytosol, peroxisome, plasma membrane	57.13	59.35
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	56.02	59.31
Bra031070.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	56.93	58.65
CDY41031	Canola	cytosol, peroxisome, plasma membrane	57.13	55.56
Bra025721.1-P	Field mustard	cytosol, nucleus, peroxisome	57.74	55.17
CDY26689	Canola	cytosol, peroxisome, plasma membrane	55.61	54.08
TraesCS3A01G280200.1	Wheat	mitochondrion	52.17	52.87
TraesCS1A01G347700.1	Wheat	mitochondrion	50.96	52.45
TraesCS1A01G290700.2	Wheat	mitochondrion	41.86	51.75
TraesCS5A01G527600.1	Wheat	cytosol	43.48	50.77
TraesCS3A01G354200.2	Wheat	cytosol	43.48	50.53
TraesCS5A01G301700.1	Wheat	cytosol	46.92	50.43
TraesCS5A01G499900.1	Wheat	cytosol	46.51	50.05
TraesCS5A01G093600.1	Wheat	cytosol	43.88	49.49
TraesCS3A01G182900.1	Wheat	cytosol	43.98	48.28
TraesCS1A01G285700.1	Wheat	cytosol	42.37	44.86
Solyc05g025690.1.1	Tomato	mitochondrion	10.62	43.39
TraesCS1A01G357100.1	Wheat	cytosol	27.6	41.94
TraesCS1A01G284600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	32.46	40.53
TraesCS2A01G312600.1	Wheat	plasma membrane	13.55	17.91
TraesCS2A01G396000.1	Wheat	plasma membrane	13.65	17.4

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	ncoils:Coil	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	InterPro:IPR002048
InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414
PRINTS:PR00466	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF80	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5A01G211800	EnsemblPlants:TraesCS5A01G211800.1
TIGR:cd00051	TIGR:cd06186	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5A:+:427065608..427075199

Molecular Weight (calculated)

110958.0 Da

IEP (calculated)

9.500

GRAVY (calculated)

-0.244

Length

989 amino acids

Sequence
(BLAST)

001: MWTPSRGSNA RRTGHRRIAE CLADDQTTNT DTSDNESFTT AYGDEFFAAA AGGSGGGGML PAFLADQEDL VEVMLELDEE SMVVRSVTPT RAALYSAAAM
101: PHTPEAPGGG GGPLSRCSST SSRIRKKFAW LRSPSPAPSP SPRVPTPAEL QREAAMAARE RRRIQARVNR SRAGAKRALK GLRFISRTTG SLEAAELWRR
201: VEERFNALAH DGLLSRDNFG ECIGMVDSKE FAEGIFDALA RRRRQSLERI TKEELYDFWL QISDQSFDAR LQIFFDMVDT NVDGRITREE VQELIVLSAS
301: ANKLAKLKEQ AEEYAALIME ELDPENLGYI ELWQLETLLL QRDTYMNYSR PLSTASGAQW SQNLGVGAGG AVPPAAKGEE DGSGTQTWGE GMRERRRGWG
401: RGVARAASHV RVAAEENWRR AWVLALWVAA MAALFVWKFV QYRRTDAFQV MGYCLPTAKG AAETLKLNMA LVLLPVCRNT LTWLRSSWAR FFVPFDDNIT
501: FHKMIATAIV VGITLHAGNH LACDFPRVIA SGPEEYRLVA GAFGASKPTY GRLISGVEGV TGIAMVVLMT VSFTLATHPF RKGEKEASAS RLPAPLHRLA
601: GFNAFWYSHH LLGFVYLLLL AHGYFLFLVR RWYEKTTWMY ISVPLVLYVG ERMLRALRSN AHTVKIIKVM LLPGSVLTIQ MSKPYGFRYR SGQYIFLQCP
701: TISPFEWHPF SITSAPGDDY LAVHIRTNGD WTQELKRIFA ENHYSLHMNR RTSFSELGAA EPRTTVPPKL LVDGPYGAPA QDFRNYDVLL LVGLGIGATP
801: FISILKDLLN NIKLADELMD LAMETTQTSR SEDSANSFSV STASSNRKRS YRTSRAHFYW VTREPMSFEW FKGVMNEVAE MDKKGVIELH NYLTSVYEER
901: DARTTLLSMV QALNHAKHGL DIVSGTRVRT HFARPNWREV FTKIAAKQPN STVGVFYCGA PTLAKELKKL SHEMSHKTST RFHFHKEYF

Best Arabidopsis Sequence Match ( AT1G19230.2 )
(BLAST)

001: MKLSPLSFST SSSFSHADGI DDGVELISSP FAGGAMLPVF LNDLSRNSGE SGSGSSWERE LVEVTLELDV GDDSILVCGM SEAASVDSRA RSVDLVTARL
101: SRNLSNASTR IRQKLGKLLR SESWKTTTSS TAGERDRDLE RQTAVTLGIL TARDKRKEDA KLQRSTSSAQ RALKGLQFIN KTTRGNSCVC DWDCDCDQMW
201: KKVEKRFESL SKNGLLARDD FGECVGMVDS KDFAVSVFDA LARRRRQKLE KITKDELHDF WLQISDQSFD ARLQIFFDMA DSNEDGKITR EEIKELLMLS
301: ASANKLAKLK EQAEEYASLI MEELDPENFG YIELWQLETL LLQRDAYMNY SRPLSTTSGG VSTPRRNLIR PRHVVQKCRK KLQCLILDNW QRSWVLLVWV
401: MLMAILFVWK FLEYREKAAF KVMGYCLTTA KGAAETLKLN MALVLLPVCR NTLTWLRSTR ARACVPFDDN INFHKIIACA IAIGILVHAG THLACDFPRI
501: INSSPEQFVL IASAFNGTKP TFKDLMTGAE GITGISMVIL TTIAFTLAST HFRRNRVRLP APLDRLTGFN AFWYTHHLLV VVYIMLIVHG TFLFFADKWY
601: QKTTWMYISV PLVLYVAERS LRACRSKHYS VKILKVSMLP GEVLSLIMSK PPGFKYKSGQ YIFLQCPTIS RFEWHPFSIT SAPGDDQLSV HIRTLGDWTE
701: ELRRVLTVGK DLSTCVIGRS KFSAYCNIDM INRPKLLVDG PYGAPAQDYR SYDVLLLIGL GIGATPFISI LKDLLNNSRD EQTDNEFSRS DFSWNSCTSS
801: YTTATPTSTH GGKKKAVKAH FYWVTREPGS VEWFRGVMEE ISDMDCRGQI ELHNYLTSVY DEGDARSTLI KMVQALNHAK HGVDILSGTR VRTHFARPNW
901: KEVFSSIARK HPNSTVGVFY CGIQTVAKEL KKQAQDMSQK TTTRFEFHKE HF

Arabidopsis Description

RBOHERespiratory burst oxidase homolog protein E [Source:UniProtKB/Swiss-Prot;Acc:O81211]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.