Factsheet for PGSC0003DMT400066027

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
cytosol 1
peroxisome 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g025680.1.1	Tomato	plasma membrane	83.19	61.06
PGSC0003DMT400035268	Potato	mitochondrion	70.52	34.36
VIT_11s0016g00540.t01	Wine grape	cytosol, peroxisome, plastid	65.72	32.82
KRH37549	Soybean	cytosol	65.72	32.44
KRH12608	Soybean	cytosol	65.5	32.05
PGSC0003DMT400032088	Potato	cytosol, nucleus, peroxisome	12.45	31.84
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	64.41	31.58
GSMUA_Achr3P05840_001	Banana	mitochondrion	60.92	31.35
GSMUA_Achr8P23680_001	Banana	mitochondrion	60.92	31.31
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	63.32	31.05
AT1G19230.2	Thale cress	cytosol, peroxisome, plasma membrane	64.19	30.88
Bra031070.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	63.97	30.52
CDY26689	Canola	cytosol, peroxisome, plasma membrane	64.19	28.91
CDY41031	Canola	cytosol, peroxisome, plasma membrane	64.19	28.91
HORVU5Hr1G062490.8	Barley	plasma membrane	61.14	28.37
Bra025721.1-P	Field mustard	cytosol, nucleus, peroxisome	63.76	28.21
TraesCS5B01G212100.1	Wheat	mitochondrion	60.48	28.12
TraesCS5D01G222100.1	Wheat	mitochondrion	60.7	27.97
TraesCS5A01G211800.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	60.04	27.81
Zm00001d032079_P001	Maize	mitochondrion	59.17	27.77
Os09t0438000-01	Rice	mitochondrion	60.92	27.71
TraesCS6D01G164500.1	Wheat	mitochondrion, plasma membrane	57.42	27.68
KXG35704	Sorghum	mitochondrion	60.7	27.61
Zm00001d020609_P001	Maize	mitochondrion	42.58	27.5
TraesCS6A01G180600.1	Wheat	mitochondrion	57.21	27.41
TraesCS6B01G205000.1	Wheat	mitochondrion	56.99	27.27
KXG25273	Sorghum	mitochondrion	59.39	26.98
HORVU6Hr1G035970.2	Barley	mitochondrion	56.11	26.8
PGSC0003DMT400063688	Potato	cytosol	50.66	26.76
PGSC0003DMT400040179	Potato	cytosol	44.54	26.29
PGSC0003DMT400078138	Potato	cytosol, nucleus, plastid	45.63	25.06
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	49.13	23.99
Os08t0453700-00	Rice	plastid	35.81	17.26
PGSC0003DMT400046647	Potato	plasma membrane	13.1	8.58
PGSC0003DMT400046925	Potato	plasma membrane	13.32	8.23
PGSC0003DMT400026254	Potato	plasma membrane	12.45	8.09
PGSC0003DMT400024558	Potato	plasma membrane, vacuole	12.45	8.06
PGSC0003DMT400000536	Potato	plastid	12.23	7.77
PGSC0003DMT400074349	Potato	plasma membrane	12.66	7.76
Solyc05g025690.1.1	Tomato	mitochondrion	0.22	0.41

Protein Annotations

EnsemblPlants:PGSC0003DMT400066027	EnsemblPlantsGene:PGSC0003DMG400025701	Gene3D:3.40.50.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114
InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	PANTHER:PTHR11972	PANTHER:PTHR11972:SF44	PFAM:PF01794	PFAM:PF08030
PGSC:PGSC0003DMG400025701	TMHMM:TMhelix	UniParc:UPI000296F4F3	UniProt:M1CEX9	MapMan:10.1.1	:

Description

Respiratory burst oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400025701]

Coordinates

chr5:+:28854963..28861304

Molecular Weight (calculated)

52159.6 Da

IEP (calculated)

8.765

GRAVY (calculated)

0.064

Length

458 amino acids

Sequence
(BLAST)

001: MVSASANKLS KLKENAGEYA CLIMEKLDPE DVGYIELWQL ETLLLQRDHY MSYSRPLSTT TSVDWSPNIG TSNANNMVKK ASRALKCLVL DNWHRGSIIL
101: LWLLSMIGLF TCKFMQYRQM EAFQVMGYCL ATAKGAAETL KFNMALILLP VCRNMLTRLR STRARILIPF DDNINFHKII AHAIAVGIIF HATDHLACDF
201: PHLVNSSPEK FALVASDFDK LKPSYISLLT GVEGITGISM VILMTIAFIL ATPHFRRSVH NLPPPLNRLT GFNAFWYSHD HLLAFVYILL LLHGTFLFFV
301: YKWYQKTTWM YISIPLILYI AERTLRTWRS EDYAVKIFKG QIEMHNYLTS VYEEGDARST LITMLQALNH AKHGVDILSG TRVRTHFARP KWTEVFKRIA
401: LKHPYSTVDM VDDTAMEPTS ISSIGRSTLG FATDCASEFG DLSPDRTRVG EQTKTFPE

Best Arabidopsis Sequence Match ( AT1G09090.1 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVTIF QE

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.