Factsheet for PGSC0003DMT400040179

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g072800.1.1	Tomato	cytosol	96.65	91.91
PGSC0003DMT400078138	Potato	cytosol, nucleus, plastid	78.48	73.02
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome	26.8	70.51
GSMUA_Achr5P29250_001	Banana	cytosol	60.57	65.1
VIT_06s0004g03790.t01	Wine grape	nucleus	69.85	63.62
CDX86059	Canola	peroxisome, plasma membrane, plastid	31.06	61.64
GSMUA_AchrUn_...	Banana	cytosol	17.78	60.53
KRH49079	Soybean	cytosol	66.62	60.19
TraesCS1D01G289300.2	Wheat	mitochondrion	60.95	59.12
GSMUA_AchrUn_...	Banana	cytosol	33.25	58.9
TraesCS1A01G290700.2	Wheat	mitochondrion	60.7	58.88
Os05t0465800-01	Rice	plasma membrane	61.6	58.36
Zm00001d009349_P004	Maize	plastid	61.34	57.91
Os01t0835500-01	Rice	cytosol	62.76	57.77
TraesCS3D01G347900.2	Wheat	cytosol	62.89	57.62
GSMUA_Achr10P...	Banana	cytosol	62.5	57.46
TraesCS3B01G386600.1	Wheat	cytosol	62.76	57.29
TraesCS3A01G354200.2	Wheat	cytosol	62.63	57.11
KXG32613	Sorghum	cytosol, plastid	60.82	57.07
OQU87817	Sorghum	cytosol	62.37	56.67
GSMUA_Achr11P...	Banana	mitochondrion	38.02	56.3
Zm00001d040974_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	61.08	56.29
HORVU3Hr1G087210.4	Barley	peroxisome, plastid	62.5	56.0
Zm00001d042961_P002	Maize	plasma membrane	62.37	54.81
Bra020270.1-P	Field mustard	cytosol	61.73	54.19
CDY09233	Canola	cytosol	61.73	54.19
AT5G60010.1	Thale cress	cytosol	61.86	54.18
PGSC0003DMT400032088	Potato	cytosol, nucleus, peroxisome	12.37	53.63
TraesCS1B01G300000.2	Wheat	mitochondrion	61.34	53.48
Bra038274.1-P	Field mustard	cytosol	58.76	52.17
AT3G45810.1	Thale cress	cytosol	60.31	51.32
CDX99140	Canola	cytosol, peroxisome, plasma membrane	51.8	47.63
HORVU1Hr1G071340.13	Barley	mitochondrion, peroxisome, plastid	61.21	46.98
PGSC0003DMT400063688	Potato	cytosol	50.52	45.21
PGSC0003DMT400066027	Potato	peroxisome	26.29	44.54
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	50.64	41.9
PGSC0003DMT400035268	Potato	mitochondrion	50.13	41.38
PGSC0003DMT400046647	Potato	plasma membrane	16.88	18.74
PGSC0003DMT400046925	Potato	plasma membrane	16.11	16.87
PGSC0003DMT400024558	Potato	plasma membrane, vacuole	14.69	16.12
PGSC0003DMT400000536	Potato	plastid	14.82	15.95
PGSC0003DMT400026254	Potato	plasma membrane	13.92	15.32
PGSC0003DMT400074349	Potato	plasma membrane	13.27	13.79

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	EntrezGene:102592652	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927	UniProt:M1B9G6
InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	EnsemblPlantsGene:PGSC0003DMG400015543
PGSC:PGSC0003DMG400015543	EnsemblPlants:PGSC0003DMT400040179	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972
PANTHER:PTHR11972:SF54	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix
UniParc:UPI000296F8A6	RefSeq:XP_006363388.1	RefSeq:XP_015158887.1	SEG:seg	:	:

Description

NOX1 [Source:PGSC_GENE;Acc:PGSC0003DMG400015543]

Coordinates

chr11:-:44982852..44987549

Molecular Weight (calculated)

89382.1 Da

IEP (calculated)

9.409

GRAVY (calculated)

-0.212

Length

776 amino acids

Sequence
(BLAST)

001: MGETPLENGG GGRKKMVRIE SGAARGFKSL HFLDNTTGKE ADAWKNVEKR FHLNAVNGIL FKNKFGPSIG MESKEFAEEL FDTMARRKKI NAENGITIEE
101: LREFWDDIST HCSDTRLHIF FDMCDKNGDG KLSEEEVKEV LVMSAAANKL TNFKKHAATY AALIMEEFDP DHLGYIEIWQ LESLLRGMVG SEDGQKNMKR
201: SQTLAKTMIP RQYRTPVSKF FSKTSEKIYD NWKRIWVVTL WLSINIILFI WKIEQFKRRE AFKIMGYCVC LAKAAGETLK FNMALILVPV CRRTLTQIRE
301: SFLGYIIPFD DNINFHKMVA VGITVGAFIH VLFHTSCNFV KLASCPESKF MTALGSNFGY QQPTYMDLVV SVPGVTGILM TLFMLFSFTL ATHSFRRNII
401: KLPWSFHRLA GFNAFWYAHH LLIFVYVLLI LHGYFLFLTK EWYKKTTWMY LAVPVVLYST ERVLIINENR YHVNIRKAVI YTGNVLALYM TKPPGFKYKS
501: GMYLFVKCPD ISNFEWHPFS ITSAPDDDYL SVHIRTLGDW TTELRTRFEK ACQATPSKTR NLVRMETKAY NQKDVEQSQA ENPMIIIKGP YGAPAQNYKK
601: YDILLLVGLG IGATPFISII KDILNQKSGY NQQDDGKKGP QRAYFYWVTR EQGSFDWFKG VMDDIAEHDE NEVIEMHNYL TSVYEEGDAR SALITMVQSL
701: QHAKNGVDVV SESRIRTHFS RPNWKRVFAQ LTATHPSSRI GVFYCGSPTL TKPLKRLCQE FSLNSSTRFN FHKENF

Best Arabidopsis Sequence Match ( AT5G60010.1 )
(BLAST)

001: MKSNTPTEDS TKWMLESVEI DSMGESSSKE PEINLNKNEG GLKKNASRNL GVGSIIRTLS VSNWRKSGNL GSPSTRKSGN LGPPTNAVPK KTGPQRVERT
101: TSSAARGLQS LRFLDRTVTG RERDAWRSIE NRFNQFSVDG KLPKEKFGVC IGMGDTMEFA AEVYEALGRR RQIETENGID KEQLKLFWED MIKKDLDCRL
201: QIFFDMCDKN GDGKLTEEEV KEVIVLSASA NRLGNLKKNA AAYASLIMEE LDPDHKGYIE MWQLEILLTG MVTNADTEKM KKSQTLTRAM IPERYRTPMS
301: KYVSVTAELM HENWKKLWVL ALWAIINVYL FMWKYEEFMR NPLYNITGRC VCAAKGAAET LKLNMALILV PVCRKTLTIL RSTFLNRVVP FDDNINFHKV
401: IAYMIAFQAL LHTALHIFCN YPRLSSCSYD VFLTYAGAAL GNTQPSYLGL MLTSVSITGV LMIFFMGFSF TLAMHYFRRN IVKLPKPFNV LAGFNAFWYA
501: HHLLVLAYIL LIIHGYYLII EKPWYQKTTW MYLAVPMLFY ASERLFSRLL QEHSHRVNVI KAIVYSGNVL ALYVTKPPGF KYKSGMYMFV KCPDLSKFEW
601: HPFSITSAPG DDYLSVHIRA LGDWTTELRS RFAKTCEPTQ AAAKPKPNSL MRMETRAAGV NPHIEESQVL FPKIFIKGPY GAPAQNYQKF DILLLVGLGI
701: GATPFISILK DMLNHLKPGI PRSGQKYEGS VGGESIGGDS VSGGGGKKFP QRAYFFWVTR EQASFDWFKG VMDDIAEYDK THVIEMHNYL TSMYEAGDAR
801: SALIAMVQKL QHAKNGVDIV SESRIRTHFA RPNWRKVFSE LSSKHEACRI GVFYCGSPTL VRPLKELCQE FSLESSTRFT FHKENF

Arabidopsis Description

RBOHHPutative respiratory burst oxidase homolog protein H [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.