Factsheet for Bra020270.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09233	Canola	cytosol	99.89	99.89
AT5G60010.1	Thale cress	cytosol	91.4	91.2
Bra038274.1-P	Field mustard	cytosol	77.38	78.26
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome	22.74	68.14
Solyc06g075570.1.1	Tomato	cytosol	58.26	62.05
PGSC0003DMT400040179	Potato	cytosol	54.19	61.73
PGSC0003DMT400078138	Potato	cytosol, nucleus, plastid	57.81	61.27
GSMUA_Achr5P29250_001	Banana	cytosol	49.77	60.94
VIT_06s0004g03790.t01	Wine grape	nucleus	58.48	60.68
GSMUA_AchrUn_...	Banana	cytosol	15.27	59.21
KRH49079	Soybean	cytosol	57.24	58.91
Os05t0465800-01	Rice	plasma membrane	54.52	58.85
Os01t0835500-01	Rice	cytosol	55.88	58.6
Zm00001d009349_P004	Maize	plastid	54.3	58.39
TraesCS1D01G289300.2	Wheat	mitochondrion	52.71	58.25
Solyc11g072800.1.1	Tomato	cytosol	53.73	58.21
TraesCS1A01G290700.2	Wheat	mitochondrion	52.38	57.88
KXG32613	Sorghum	cytosol, plastid	53.96	57.68
TraesCS3D01G347900.2	Wheat	cytosol	54.98	57.38
TraesCS3B01G386600.1	Wheat	cytosol	54.75	56.94
TraesCS3A01G354200.2	Wheat	cytosol	54.75	56.87
Zm00001d040974_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	54.07	56.77
OQU87817	Sorghum	cytosol	54.19	56.09
HORVU3Hr1G087210.4	Barley	peroxisome, plastid	54.75	55.89
GSMUA_Achr10P...	Banana	cytosol	52.49	54.98
Zm00001d042961_P002	Maize	plasma membrane	54.64	54.7
TraesCS1B01G300000.2	Wheat	mitochondrion	52.94	52.58
GSMUA_AchrUn_...	Banana	cytosol	25.57	51.6
GSMUA_Achr11P...	Banana	mitochondrion	30.43	51.34
HORVU1Hr1G071340.13	Barley	mitochondrion, peroxisome, plastid	53.85	47.08
Bra031658.1-P	Field mustard	cytosol	43.1	45.04
Bra027764.1-P	Field mustard	mitochondrion	47.74	44.51
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	40.72	43.22
Bra029194.1-P	Field mustard	cytosol	43.44	42.2
Bra037520.1-P	Field mustard	cytosol	43.55	41.76
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	39.14	41.54
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	42.87	41.15
Bra009266.1-P	Field mustard	cytosol	41.18	40.35
Bra033151.1-P	Field mustard	cytosol	32.35	38.44
Bra031070.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	41.29	38.02
Bra011911.1-P	Field mustard	cytosol	27.38	37.58
Bra025721.1-P	Field mustard	cytosol, nucleus, peroxisome	41.74	35.65
Bra013862.1-P	Field mustard	cytosol	6.9	23.55
Bra009719.1-P	Field mustard	golgi, plasma membrane	10.41	18.59
Bra023239.1-P	Field mustard	plasma membrane	14.14	17.19
Bra029389.1-P	Field mustard	plasma membrane	13.12	16.62
Bra037953.1-P	Field mustard	plasma membrane	13.8	16.49
Bra032641.1-P	Field mustard	plasma membrane	12.67	16.14
Bra032640.1-P	Field mustard	plasma membrane	12.9	15.72
Bra033252.1-P	Field mustard	golgi, plasma membrane	12.22	15.43
Bra037329.1-P	Field mustard	cytosol, peroxisome, plasma membrane	12.1	14.82

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	EnsemblPlantsGene:Bra020270	EnsemblPlants:Bra020270.1
EnsemblPlants:Bra020270.1-P	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8
InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869
InterPro:IPR002048	InterPro:IPR017927	UniProt:M4DUS7	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022
PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF54	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	UniParc:UPI00025435EC	SEG:seg	:	:	:

Description

AT5G60010 (E=0.0) | FAD binding / calcium ion binding / electron carrier/ iron ion binding / oxidoreductase/ oxidoreductase, acting on NADH or NADPH, with oxygen as acceptor / peroxidase/ superoxide-generating NADPH oxidase

Coordinates

chrA02:-:5952416..5957560

Molecular Weight (calculated)

100473.0 Da

IEP (calculated)

9.597

GRAVY (calculated)

-0.197

Length

884 amino acids

Sequence
(BLAST)

001: MMKNNSPSDE KWMLESVEID TMGDTSSKKP DINVKKNEGG LKKTASRGVG SIIRTLSVSN WRKSGNLGSP STRKSGNLGP PGAAVLPKKG PQRVERTTSS
101: AARGLQSLRF LDRTVTGKER DSWRSIENRF NQFSVDGKLP KEKFGVCIGM GDTMEFAGEV YEALGRRRQI ETESGIDKEQ LKLFWEDMIK KDLDCRLQIF
201: FDMCDKDGDG KLTEDEVKEV IVLSAAANRL GNLKKNAAAY ASLIMEELDP DHKGYIEMWQ LEVLLTGMVS NADTEKMKKS QTLTRAMIPE RYRTPMSKYV
301: SVTTELMHEN WKKIWVLTLW LLINVYLFMW KYNEFMRSPL YNITGRCVCA AKGSAETLKF NMALILVPVC RKTLTMLRSS FLSRMIPFDD NINFHKVIAY
401: AIAFHALLHT LLHLFCNYPR LSTCSYDVFL KYAGSALGHT QPSYLGLMMT SVSITGVFMI FFMGFSFTLA MHYFRRNIVK LPKPFSVLAG FNAFWYAHHL
501: LILAYVLLIL HGYYLIIEKP WYEKTTWMYV AVPMLFYASE RLFSRVLQDH SHRVHVIKAI VYSGNVLALY VTKPPAFKYK SGMYMFVKCP DLSQFEWHPF
601: SITSAPGDDY LSVHIRALGD WTTELRNTFA KTCEPPPQAA AKPKPNSLMR METRATGANP HFEESQVLFP KIFIKGPYGA PAQNYQKFDI LLLVGLGIGA
701: TPFISILKDM LNHLKPGIPK VGQKYEGSVG GESVGGDSIS GGGGKKFPQR AYFFWVTREQ ASFDWFKGVM DDIAEYDKTH VIEMHNYLTS MYEAGDARSA
801: LIAMVQKLQH AKNGVDIVSE SRIRTHFARP NWRKVFSELS SKHEACRIGV FYCGSPTLVR PLRDLCQEFS LESSTRFTFH KENF

Best Arabidopsis Sequence Match ( AT5G60010.1 )
(BLAST)

001: MKSNTPTEDS TKWMLESVEI DSMGESSSKE PEINLNKNEG GLKKNASRNL GVGSIIRTLS VSNWRKSGNL GSPSTRKSGN LGPPTNAVPK KTGPQRVERT
101: TSSAARGLQS LRFLDRTVTG RERDAWRSIE NRFNQFSVDG KLPKEKFGVC IGMGDTMEFA AEVYEALGRR RQIETENGID KEQLKLFWED MIKKDLDCRL
201: QIFFDMCDKN GDGKLTEEEV KEVIVLSASA NRLGNLKKNA AAYASLIMEE LDPDHKGYIE MWQLEILLTG MVTNADTEKM KKSQTLTRAM IPERYRTPMS
301: KYVSVTAELM HENWKKLWVL ALWAIINVYL FMWKYEEFMR NPLYNITGRC VCAAKGAAET LKLNMALILV PVCRKTLTIL RSTFLNRVVP FDDNINFHKV
401: IAYMIAFQAL LHTALHIFCN YPRLSSCSYD VFLTYAGAAL GNTQPSYLGL MLTSVSITGV LMIFFMGFSF TLAMHYFRRN IVKLPKPFNV LAGFNAFWYA
501: HHLLVLAYIL LIIHGYYLII EKPWYQKTTW MYLAVPMLFY ASERLFSRLL QEHSHRVNVI KAIVYSGNVL ALYVTKPPGF KYKSGMYMFV KCPDLSKFEW
601: HPFSITSAPG DDYLSVHIRA LGDWTTELRS RFAKTCEPTQ AAAKPKPNSL MRMETRAAGV NPHIEESQVL FPKIFIKGPY GAPAQNYQKF DILLLVGLGI
701: GATPFISILK DMLNHLKPGI PRSGQKYEGS VGGESIGGDS VSGGGGKKFP QRAYFFWVTR EQASFDWFKG VMDDIAEYDK THVIEMHNYL TSMYEAGDAR
801: SALIAMVQKL QHAKNGVDIV SESRIRTHFA RPNWRKVFSE LSSKHEACRI GVFYCGSPTL VRPLKELCQE FSLESSTRFT FHKENF

Arabidopsis Description

RBOHHPutative respiratory burst oxidase homolog protein H [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.