Factsheet for Bra029194.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38845	Canola	cytosol, peroxisome, plasma membrane	99.89	99.89
CDY32647	Canola	cytosol, peroxisome, plasma membrane	99.56	99.56
AT5G51060.1	Thale cress	cytosol	91.76	92.27
GSMUA_Achr10P...	Banana	plasma membrane	41.87	73.13
GSMUA_Achr6P11760_001	Banana	golgi	32.75	73.04
Os11t0537400-01	Rice	plasma membrane	3.41	70.45
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	63.63	69.51
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	60.55	66.15
GSMUA_Achr6P16270_001	Banana	cytosol	60.77	64.23
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	63.41	62.65
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	57.25	62.47
GSMUA_Achr10P...	Banana	cytosol	62.86	62.24
TraesCS5A01G499900.1	Wheat	cytosol	62.75	62.13
TraesCS4D01G324800.1	Wheat	cytosol	62.64	62.09
TraesCS4B01G327800.2	Wheat	cytosol	62.53	62.05
Bra037520.1-P	Field mustard	cytosol	62.86	62.04
Bra009266.1-P	Field mustard	cytosol	61.43	61.97
KRH41026	Soybean	mitochondrion	60.44	61.94
TraesCS5B01G299000.1	Wheat	cytosol	61.98	61.44
TraesCS5D01G306400.1	Wheat	cytosol	61.76	61.29
KRH59706	Soybean	cytosol	60.44	61.25
VIT_19s0014g02830.t01	Wine grape	cytosol	56.37	61.07
KRH63901	Soybean	cytosol, nucleus, plasma membrane	62.2	60.99
TraesCS5A01G301700.1	Wheat	cytosol	61.65	60.98
KRH54051	Soybean	cytosol, nucleus, plasma membrane	62.31	60.26
Zm00001d052653_P003	Maize	cytosol, plastid	62.86	58.91
Bra031658.1-P	Field mustard	cytosol	54.07	58.16
HORVU4Hr1G081670.1	Barley	cytosol	62.31	58.03
GSMUA_Achr6P11770_001	Banana	cytosol	25.27	57.21
Bra011911.1-P	Field mustard	cytosol	40.44	57.14
TraesCS1B01G295100.1	Wheat	plasma membrane	41.98	55.93
GSMUA_Achr10P...	Banana	nucleus, plastid	17.03	55.56
Zm00001d007421_P004	Maize	cytosol	57.58	55.27
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	27.8	54.88
Zm00001d007430_P002	Maize	cytosol	48.79	54.01
OQU83587	Sorghum	plastid	63.08	53.2
TraesCS1A01G285700.1	Wheat	cytosol	53.41	52.03
HORVU1Hr1G072160.5	Barley	cytosol	53.41	51.98
Zm00001d007426_P001	Maize	cytosol, plastid	54.84	50.15
Bra027764.1-P	Field mustard	mitochondrion	51.98	49.89
TraesCS1B01G295300.1	Wheat	cytosol	46.37	49.53
TraesCS1D01G284800.1	Wheat	plastid	53.63	48.85
HORVU1Hr1G072140.1	Barley	cytosol	49.12	48.12
TraesCS1A01G357100.1	Wheat	cytosol	33.85	47.31
TraesCS1D01G285000.1	Wheat	cytosol	45.93	46.04
HORVU5Hr1G078630.1	Barley	cytosol	48.24	45.49
Bra033151.1-P	Field mustard	cytosol	36.15	44.22
Bra031070.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	46.26	43.85
Bra020270.1-P	Field mustard	cytosol	42.2	43.44
Bra038274.1-P	Field mustard	cytosol	40.22	41.88
HORVU0Hr1G013380.4	Barley	plastid	35.82	41.48
Bra025721.1-P	Field mustard	cytosol, nucleus, peroxisome	46.59	40.97
Bra013862.1-P	Field mustard	cytosol	11.32	39.77
TraesCS1D01G284900.1	Wheat	cytosol	50.33	39.48
TraesCS1B01G295200.1	Wheat	cytosol	49.45	36.79
Bra009719.1-P	Field mustard	golgi, plasma membrane	10.55	19.39
Bra029389.1-P	Field mustard	plasma membrane	13.52	17.62
Bra032641.1-P	Field mustard	plasma membrane	13.08	17.15
Bra033252.1-P	Field mustard	golgi, plasma membrane	12.75	16.57
Bra023239.1-P	Field mustard	plasma membrane	13.19	16.51
Bra032640.1-P	Field mustard	plasma membrane	13.08	16.41
Bra037329.1-P	Field mustard	cytosol, peroxisome, plasma membrane	12.75	16.07
Bra037953.1-P	Field mustard	plasma membrane	12.42	15.27

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	EnsemblPlantsGene:Bra029194	EnsemblPlants:Bra029194.1
EnsemblPlants:Bra029194.1-P	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8
InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006091	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009060	GO:GO:0009605
GO:GO:0009653	GO:GO:0009719	GO:GO:0009987	GO:GO:0009991	GO:GO:0010053	GO:GO:0016020
GO:GO:0016021	GO:GO:0016174	GO:GO:0016491	GO:GO:0030154	GO:GO:0033198	GO:GO:0050664
GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927	UniProt:M4EK77	InterPro:NADPH_Ox
PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018
PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473
SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0002540166	SEG:seg	:

Description

AT5G51060 (E=0.0) RHD2, ATRBOHC, RBOHC | RHD2 (ROOT HAIR DEFECTIVE 2); NAD(P)H oxidase

Coordinates

chrA03:+:6791926..6796912

Molecular Weight (calculated)

103116.0 Da

IEP (calculated)

9.866

GRAVY (calculated)

-0.245

Length

910 amino acids

Sequence
(BLAST)

001: MQRVSFEVSG SGYNSEAESS GYMSGPMSGQ LPPVYKKPAI KNSGYSGEHR RPQAPYVDIT VDVHDDRVSV NSLKSPGSEG GSSVEESPEL TLLKRNRLEK
101: KTSVVKRLAS VSHELKRITS VSSSSTRKAG RGAAKLDRTK SAAAQALKGL KFISKNDGGA GWSAVEKRFN QITATTGGLL IRTKFGECIG MNSKEFALEL
201: FDALARRRNI TGEVIDGDQL KEFWEQINDQ SFDSRLKTFF DMVDKDADGR LTEDEVREII SLSASANNLN TIQKRADEYA ALIMEELDPD NIGYIMLESL
301: ETLLLQAASQ SVITSTGERK NLSQMMSQRL KPTFNRNPLK RWYRGLRFFV LDNWQRCWVI VLWLIAMAIL FVYKYIQYRR SPVYPVMGDC VCMAKGAAET
401: VKLNMALILL PVCRNTITWL RNKTRLGRVV PFDDNLNFHK VIAVGILVGV TIHAGAHLSC DFPRLLDATP EQYRPLRQFF GEEQPQSYWH FVNSVEGITG
501: LVMVLLMAIA FTLATPWFRR GKLKLPGPLK QLASFNAFWY THHLFVIVYV LLVAHGYYLY ITKDWRQKTT WMYLVVPVVL YGCERLIRAF RSSIKAVTIR
601: KVAVYPGNVL AIHLSRPQNF KYKSGQYMFV NCAAVSPFEW HPFSITSAPQ DDYLSVHIRV LGDWTRALKG VFSEVCKPPP AGVSGLLRAD MMHGANNPDF
701: PKVLIDGPYG APAQDYKKYE VVLLVGLGIG ATPMISIVKD IVNNIRAKEQ AELNRMEHGT SEPQQRNKKE SFRTRRAYFY WVTREQGSFD WFKNIMNEVA
801: ERDTNRIIEL HNYCTSVYEE GDARSALIHM LQSLNHAKNG VDIVSGTRVM SHFAKPNWRN VYKRIAMDHP NTKVGVFYCG APALTKELRH LALDFTHKTS
901: TRFSFHKENF

Best Arabidopsis Sequence Match ( AT5G51060.1 )
(BLAST)

001: MSRVSFEVSG GYHSDAEAGN SGPMSGGQLP PIYKKPGNSR FTAENSQRTR TAPYVDLTVD VQDDTVSVHS LKMEGGSSVE ESPELTLLKR NRLEKKTTVV
101: KRLASVSHEL KRLTSVSGGI GGRKPPRPAK LDRTKSAASQ ALKGLKFISK TDGGAGWSAV EKRFNQITAT TGGLLLRTKF GECIGMTSKD FALELFDALA
201: RRRNITGEVI DGDQLKEFWE QINDQSFDSR LKTFFDMVDK DADGRLTEDE VREIISLSAS ANNLSTIQKR ADEYAALIME ELDPDNIGYI MLESLETLLL
301: QAATQSVITS TGERKNLSHM MSQRLKPTFN RNPLKRWYRG LRFFLLDNWQ RCWVIVLWFI VMAILFTYKY IQYRRSPVYP VMGDCVCMAK GAAETVKLNM
401: ALILLPVCRN TITWLRNKTR LGRVVPFDDN LNFHKVIAVG IIVGVTMHAG AHLACDFPRL LHATPEAYRP LRQFFGDEQP KSYWHFVNSV EGITGLVMVL
501: LMAIAFTLAT PWFRRGKLNY LPGPLKKLAS FNAFWYTHHL FVIVYILLVA HGYYLYLTRD WHNKTTWMYL VVPVVLYACE RLIRAFRSSI KAVTIRKVAV
601: YPGNVLAIHL SRPQNFKYKS GQYMFVNCAA VSPFEWHPFS ITSAPQDDYL SVHIRVLGDW TRALKGVFSE VCKPPPAGVS GLLRADMLHG ANNPDFPKVL
701: IDGPYGAPAQ DYKKYEVVLL VGLGIGATPM ISIVKDIVNN IKAKEQAQLN RMENGTSEPQ RSKKESFRTR RAYFYWVTRE QGSFDWFKNI MNEVAERDAN
801: RVIEMHNYCT SVYEEGDARS ALIHMLQSLN HAKNGVDIVS GTRVMSHFAK PNWRNVYKRI AMDHPNTKVG VFYCGAPALT KELRHLALDF THKTSTRFSF
901: HKENF

Arabidopsis Description

RBOHCRHD2 [Source:UniProtKB/TrEMBL;Acc:A0A178UIV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.