Factsheet for TraesCS5B01G299000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G306400.1	Wheat	cytosol	98.47	98.58
TraesCS5A01G301700.1	Wheat	cytosol	98.15	97.93
TraesCS4B01G327800.2	Wheat	cytosol	84.42	84.51
GSMUA_Achr6P11760_001	Banana	golgi	35.29	79.41
Zm00001d052653_P003	Maize	cytosol, plastid	81.15	76.72
Os11t0537400-01	Rice	plasma membrane	3.59	75.0
GSMUA_Achr6P16270_001	Banana	cytosol	67.21	71.66
GSMUA_Achr10P...	Banana	cytosol	70.37	70.29
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	63.83	70.26
OQU83587	Sorghum	plastid	80.61	68.58
TraesCS1B01G295100.1	Wheat	plasma membrane	50.98	68.52
GSMUA_Achr6P11770_001	Banana	cytosol	29.74	67.91
Zm00001d007421_P004	Maize	cytosol	69.39	67.19
Zm00001d007430_P002	Maize	cytosol	58.06	64.84
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	65.03	64.61
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	66.01	64.61
Solyc03g117980.2.1	Tomato	nucleus	65.8	64.39
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	64.49	64.28
Bra037520.1-P	Field mustard	cytosol	64.49	64.21
KRH63901	Soybean	cytosol, nucleus, plasma membrane	63.83	63.15
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	63.29	63.08
Solyc06g068680.2.1	Tomato	cytosol	58.82	63.01
AT5G51060.1	Thale cress	cytosol	61.87	62.76
TraesCS1B01G295300.1	Wheat	cytosol	57.95	62.44
KRH54051	Soybean	cytosol, nucleus, plasma membrane	63.73	62.17
Bra029194.1-P	Field mustard	cytosol	61.44	61.98
VIT_01s0150g00450.t01	Wine grape	cytosol	61.76	61.43
TraesCS4B01G358800.1	Wheat	cytosol	56.32	61.04
KRH41026	Soybean	mitochondrion	58.93	60.92
Zm00001d007426_P001	Maize	cytosol, plastid	65.8	60.7
KRH59706	Soybean	cytosol	58.82	60.13
VIT_19s0014g02830.t01	Wine grape	cytosol	54.68	59.76
TraesCS3B01G212900.5	Wheat	cytosol	57.41	58.56
AT4G25090.1	Thale cress	cytosol	54.14	58.54
TraesCS5B01G099700.1	Wheat	cytosol	55.56	58.42
AT5G07390.1	Thale cress	cytosol	57.08	58.09
Bra009266.1-P	Field mustard	cytosol	56.43	57.43
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	51.63	56.9
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	50.33	55.46
TraesCS3B01G314000.2	Wheat	mitochondrion	53.49	52.01
TraesCS1B01G362200.1	Wheat	mitochondrion	54.58	51.54
TraesCS3B01G386600.1	Wheat	cytosol	46.08	49.76
Bra011911.1-P	Field mustard	cytosol	34.2	48.76
TraesCS1B01G295200.1	Wheat	cytosol	64.05	48.08
TraesCS5B01G212100.1	Wheat	mitochondrion	51.2	47.72
TraesCS6B01G205000.1	Wheat	mitochondrion	49.02	47.02
TraesCS1B01G300000.2	Wheat	mitochondrion	45.21	46.63
TraesCS1B01G293900.1	Wheat	cytosol, peroxisome, plasma membrane	34.42	39.06
Bra013862.1-P	Field mustard	cytosol	11.0	39.0
CDY22645	Canola	cytosol	9.59	38.94
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	8.71	37.56
TraesCS2B01G414300.1	Wheat	plasma membrane	13.94	17.7
TraesCS2B01G329600.1	Wheat	plasma membrane	13.94	17.14

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	ncoils:Coil	InterPro:Cyt_b245_heavy_chain
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom
InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0050664
GO:GO:0055114	InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022
PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5B01G299000	EnsemblPlants:TraesCS5B01G299000.1	TIGR:cd00051	TIGR:cd06186	SEG:seg

Description

No Description!

Coordinates

chr5B:+:482288273..482291029

Molecular Weight (calculated)

102750.0 Da

IEP (calculated)

9.505

GRAVY (calculated)

-0.252

Length

918 amino acids

Sequence
(BLAST)

001: MHNYGGGGGA GDIVEAGGER AVLPHSGPLV GKRAATRKSA RFADSVSAPL RRGNHHHGQD DDDDDYVEVT LDVRDDSVAV HSVKPAPGGE EDPDVTLLAR
101: ALETRSSSYG GRAHGGGVLR NASTRIKQVS QELRKIASVK RRPSRIDRSK SAAAHALKGL KFISRPDGWP AVEKRFDELA ENGGLLHRSK FGKCIGMKEL
201: AFAGELFDAL ARRRDISGDS ISKAELLEFW DQISDTSFDS RLQTFFDMVD KDADGRITEA EVGQIIGLSA AANDLKKITE RTEEYARLIM EELDPDNLGY
301: IELSNLETLL LQAPPTQPTR GGSGTTSSRN LSQMLSQHLK PTTEPNPLRR WYRRASYFLE DNWRRCWVII LWFSICAGLF AWKFVQYRRR AVFEVMGYCV
401: CVAKGGAETL KFNMALVLLP VCRNTITWLR NRTAAGRVVP FDDNLNFHKV IAAGITVGAG MHIISHLACD FPRLLHATEE EYEPMKPFFG DVKPPNYWWF
501: VKGTEGWTGL VMLALMAVAF TLATPWFRRG RVRLPGPLSR LTGFNAFWYT HHLFIIVYAL LIVHGHFLYL TKKWQKKSTW MYLAAPMVLY ACERLARALR
601: SSVRPVKILK VAVYPGNVLS LRFSKPQGFR CKSGQYIFVN CAAVSPFQWH PFSITSAPHD DYISVHIRTL GDWTRELKSV FEKVCRPPTD GKSGLLRAEY
701: AGDGGAMPSP SSFPTVLIDG PYGAPAQDYK QYDVVLLVGL GIGATPMISI IKDIINNMKR LDGDIESGSP SDRSVSAASF RTRRAYFYWV TREEGSFDWF
801: RGVMDEVAES DKKGIIELHN YCTSVYEEGD ARSALIAMLQ SLNHAKHGVD VVSGTRVKTH FARPNWRKVY KDIAIAHAGQ RVGVFYCGAP VLIKELRQLA
901: QDFSRKTSTK FEFHKENF

Best Arabidopsis Sequence Match ( AT5G51060.1 )
(BLAST)

001: MSRVSFEVSG GYHSDAEAGN SGPMSGGQLP PIYKKPGNSR FTAENSQRTR TAPYVDLTVD VQDDTVSVHS LKMEGGSSVE ESPELTLLKR NRLEKKTTVV
101: KRLASVSHEL KRLTSVSGGI GGRKPPRPAK LDRTKSAASQ ALKGLKFISK TDGGAGWSAV EKRFNQITAT TGGLLLRTKF GECIGMTSKD FALELFDALA
201: RRRNITGEVI DGDQLKEFWE QINDQSFDSR LKTFFDMVDK DADGRLTEDE VREIISLSAS ANNLSTIQKR ADEYAALIME ELDPDNIGYI MLESLETLLL
301: QAATQSVITS TGERKNLSHM MSQRLKPTFN RNPLKRWYRG LRFFLLDNWQ RCWVIVLWFI VMAILFTYKY IQYRRSPVYP VMGDCVCMAK GAAETVKLNM
401: ALILLPVCRN TITWLRNKTR LGRVVPFDDN LNFHKVIAVG IIVGVTMHAG AHLACDFPRL LHATPEAYRP LRQFFGDEQP KSYWHFVNSV EGITGLVMVL
501: LMAIAFTLAT PWFRRGKLNY LPGPLKKLAS FNAFWYTHHL FVIVYILLVA HGYYLYLTRD WHNKTTWMYL VVPVVLYACE RLIRAFRSSI KAVTIRKVAV
601: YPGNVLAIHL SRPQNFKYKS GQYMFVNCAA VSPFEWHPFS ITSAPQDDYL SVHIRVLGDW TRALKGVFSE VCKPPPAGVS GLLRADMLHG ANNPDFPKVL
701: IDGPYGAPAQ DYKKYEVVLL VGLGIGATPM ISIVKDIVNN IKAKEQAQLN RMENGTSEPQ RSKKESFRTR RAYFYWVTRE QGSFDWFKNI MNEVAERDAN
801: RVIEMHNYCT SVYEEGDARS ALIHMLQSLN HAKNGVDIVS GTRVMSHFAK PNWRNVYKRI AMDHPNTKVG VFYCGAPALT KELRHLALDF THKTSTRFSF
901: HKENF

Arabidopsis Description

RBOHCRHD2 [Source:UniProtKB/TrEMBL;Acc:A0A178UIV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.