CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41026	Soybean	mitochondrion	95.43	96.51
KRH63901	Soybean	cytosol, nucleus, plasma membrane	76.06	73.6
KRH54051	Soybean	cytosol, nucleus, plasma membrane	75.95	72.48
GSMUA_Achr6P11760_001	Banana	golgi	32.85	72.3
GSMUA_Achr10P...	Banana	plasma membrane	41.65	71.78
Os11t0537400-01	Rice	plasma membrane	3.12	63.64
GSMUA_Achr6P16270_001	Banana	cytosol	60.36	62.95
KRH33894	Soybean	cytosol	57.8	62.91
VIT_19s0014g02830.t01	Wine grape	cytosol	58.24	62.26
AT5G51060.1	Thale cress	cytosol	62.25	61.77
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	56.35	60.67
CDY32647	Canola	cytosol, peroxisome, plasma membrane	61.36	60.55
Bra029194.1-P	Field mustard	cytosol	61.25	60.44
CDY38845	Canola	cytosol, peroxisome, plasma membrane	61.25	60.44
KRG96816	Soybean	cytosol	59.58	60.32
KRH68525	Soybean	cytosol	59.13	60.0
GSMUA_Achr10P...	Banana	cytosol	61.36	59.96
KRG92895	Soybean	extracellular, mitochondrion	58.69	59.28
TraesCS4B01G327800.2	Wheat	cytosol	60.47	59.21
TraesCS4D01G324800.1	Wheat	cytosol	60.47	59.15
TraesCS5A01G301700.1	Wheat	cytosol	60.36	58.91
TraesCS5D01G306400.1	Wheat	cytosol	60.13	58.89
TraesCS5A01G499900.1	Wheat	cytosol	60.24	58.87
TraesCS5B01G299000.1	Wheat	cytosol	60.13	58.82
CDX70035	Canola	cytosol	57.46	58.24
CDX92671	Canola	cytosol	48.66	57.8
Bra009266.1-P	Field mustard	cytosol	57.8	57.54
AT4G25090.1	Thale cress	cytosol	54.34	57.48
AT5G07390.1	Thale cress	cytosol	57.46	57.21
CDX98976	Canola	cytosol	57.57	56.94
CDX92674	Canola	mitochondrion	21.94	56.61
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	28.84	56.18
Zm00001d052653_P003	Maize	cytosol, plastid	60.24	55.72
CDY11053	Canola	cytosol, nucleus, plasma membrane	51.56	55.58
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	51.45	55.46
HORVU4Hr1G081670.1	Barley	cytosol	60.13	55.27
GSMUA_Achr6P11770_001	Banana	cytosol	24.72	55.22
CDX81049	Canola	cytosol	52.67	55.19
TraesCS1B01G295100.1	Wheat	plasma membrane	41.87	55.05
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	50.22	54.14
CDX81047	Canola	cytosol	51.11	53.87
CDX78290	Canola	cytosol	51.0	53.63
GSMUA_Achr10P...	Banana	nucleus, plastid	16.59	53.41
CDY26109	Canola	mitochondrion	35.08	53.39
CDY08237	Canola	cytosol, peroxisome, plasma membrane	31.63	53.38
Zm00001d007421_P004	Maize	cytosol	56.01	53.06
CDY11054	Canola	cytosol, nucleus, plasma membrane	47.77	52.57
KRH27880	Soybean	cytosol	54.12	52.43
KRH77593	Soybean	cytosol	53.9	52.21
HORVU1Hr1G072160.5	Barley	cytosol	53.45	51.34
KRH41250	Soybean	cytosol	53.79	51.33
CDX92675	Canola	cytosol	22.05	51.3
KRH59983	Soybean	cytosol, nucleus, plasma membrane	53.56	51.12
Zm00001d007430_P002	Maize	cytosol	46.77	51.09
TraesCS1A01G285700.1	Wheat	cytosol	52.78	50.75
OQU83587	Sorghum	plastid	60.69	50.51
TraesCS1B01G295300.1	Wheat	cytosol	46.33	48.83
Bra011911.1-P	Field mustard	cytosol	34.97	48.76
Zm00001d007426_P001	Maize	cytosol, plastid	53.23	48.04
HORVU1Hr1G072140.1	Barley	cytosol	49.33	47.69
TraesCS1D01G284800.1	Wheat	plastid	52.56	47.25
KRH37549	Soybean	cytosol	47.88	46.34
TraesCS1A01G357100.1	Wheat	cytosol	33.52	46.24
KRH12608	Soybean	cytosol	47.88	45.94
TraesCS1D01G285000.1	Wheat	cytosol	46.1	45.59
KRH49079	Soybean	cytosol	42.98	44.94
HORVU5Hr1G078630.1	Barley	cytosol	46.77	43.52
KRH03132	Soybean	plastid	37.75	41.29
KRH56816	Soybean	plastid	37.42	40.98
HORVU0Hr1G013380.4	Barley	plastid	34.86	39.82
TraesCS1D01G284900.1	Wheat	cytosol	50.56	39.14
TraesCS1B01G295200.1	Wheat	cytosol	50.0	36.71
KRH48086	Soybean	plasma membrane	14.7	18.38
KRH06603	Soybean	plasma membrane	14.48	18.11
KRH35248	Soybean	plasma membrane	14.03	17.67
KRH35246	Soybean	plasma membrane	13.81	17.66
KRH03224	Soybean	peroxisome	13.81	17.2
KRH36697	Soybean	plasma membrane	13.92	17.03
KRH00822	Soybean	plasma membrane	13.47	16.88
KRH57132	Soybean	plasma membrane	12.14	16.74
KRH11700	Soybean	plasma membrane	13.47	16.53

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	EntrezGene:100808271	Gene3D:2.40.30.10	Gene3D:3.40.50.80	UniProt:A0A0R0JYE8
EMBL:ACUP02003338	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8
InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	EnsemblPlantsGene:GLYMA_05G198700	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114
GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927	EnsemblPlants:KRH59706	ProteinID:KRH59706	ProteinID:KRH59706.1
InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466
ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI000233A407	SEG:seg

Description

hypothetical protein

Coordinates

chr5:+:38284019..38289957

Molecular Weight (calculated)

101116.0 Da

IEP (calculated)

8.736

GRAVY (calculated)

-0.209

Length

898 amino acids

Sequence
(BLAST)

001: MGGTSADLHH HESDIELTDA ERTDTKLGAS DSKAGNDVGL DSGTKSQAEA EGQHYVEVTM DIHRDSVALH SVKTVAAGVD MVEEEGDKLG LMGKRLEKKT
101: TFGASVVQSA ANRMKQLKRL ASFSKPAPKH FERTKSAVGH ALTGLKFISK TDGGAGWGEV EKQFNKLTAT TGGYLPRALF AQCLGLNKES EAYAEKLFDT
201: LARQRGIQGG SINKIQLKEF WDHISDQSFD TRLKTFFDMV DKDADGRITE EEIKEIICLS ATANKLSNIQ KQAEEYAALI MEELDPADTG YIMIDNLETL
301: LLHEPEETTR GESKYLSQML SQKLKSTFAD SAIMRWCRDA KYFLLDNWQR SWVLALWIGV MLGLFAYKFV QYRRKAAYEV MGHCVCMAKG AAETLKLNMA
401: LILLPVCRNT ITWLRNKTKL GVVVPLDDNI NFHKVIAVAI AVAVAVHSIY HLTCDFPRLL HASDEKYKLM QPFFGDRPSD YWYFVKSWEG VTGIIIVVLM
501: AIAFTLANPR FRRGRAKLPK PFNKFTGFNA FWYSHHLFVI VYALLVVHGI KLYLTKEWYK KTTWMYLAIP ITIYALERLV RAFRSSIKSV RILKVTLYPG
601: NVLSLKMSKP HGFSYKSGQY MFVNCAAVSP FEWHPFSITS APDDDYLSVH IKILGDWTRS LKAKFTQACQ QPLNGQSGLL RAECLKGDNS PSSFPKVLVD
701: GPYGAPAQDY REYEVVLLVG LGIGATPMIS ILKDMVNNFK AIDEEEGIGG AKSPTRLSDF KTSRAYFYWV TREQGSFDWF KGVMNEVAEE DRRKVIELHS
801: YCTSVYEEGD ARSALIAMLQ SLNHAKNGVD IVSGTRVMSH FAKPNWRSVY KRIALNHPDA RVGVFYCGPS ALTHELRQLA LDFSHNTSTK YDFHKENF

Best Arabidopsis Sequence Match ( AT5G51060.1 )
(BLAST)

001: MSRVSFEVSG GYHSDAEAGN SGPMSGGQLP PIYKKPGNSR FTAENSQRTR TAPYVDLTVD VQDDTVSVHS LKMEGGSSVE ESPELTLLKR NRLEKKTTVV
101: KRLASVSHEL KRLTSVSGGI GGRKPPRPAK LDRTKSAASQ ALKGLKFISK TDGGAGWSAV EKRFNQITAT TGGLLLRTKF GECIGMTSKD FALELFDALA
201: RRRNITGEVI DGDQLKEFWE QINDQSFDSR LKTFFDMVDK DADGRLTEDE VREIISLSAS ANNLSTIQKR ADEYAALIME ELDPDNIGYI MLESLETLLL
301: QAATQSVITS TGERKNLSHM MSQRLKPTFN RNPLKRWYRG LRFFLLDNWQ RCWVIVLWFI VMAILFTYKY IQYRRSPVYP VMGDCVCMAK GAAETVKLNM
401: ALILLPVCRN TITWLRNKTR LGRVVPFDDN LNFHKVIAVG IIVGVTMHAG AHLACDFPRL LHATPEAYRP LRQFFGDEQP KSYWHFVNSV EGITGLVMVL
501: LMAIAFTLAT PWFRRGKLNY LPGPLKKLAS FNAFWYTHHL FVIVYILLVA HGYYLYLTRD WHNKTTWMYL VVPVVLYACE RLIRAFRSSI KAVTIRKVAV
601: YPGNVLAIHL SRPQNFKYKS GQYMFVNCAA VSPFEWHPFS ITSAPQDDYL SVHIRVLGDW TRALKGVFSE VCKPPPAGVS GLLRADMLHG ANNPDFPKVL
701: IDGPYGAPAQ DYKKYEVVLL VGLGIGATPM ISIVKDIVNN IKAKEQAQLN RMENGTSEPQ RSKKESFRTR RAYFYWVTRE QGSFDWFKNI MNEVAERDAN
801: RVIEMHNYCT SVYEEGDARS ALIHMLQSLN HAKNGVDIVS GTRVMSHFAK PNWRNVYKRI AMDHPNTKVG VFYCGAPALT KELRHLALDF THKTSTRFSF
901: HKENF

Arabidopsis Description

RBOHCRHD2 [Source:UniProtKB/TrEMBL;Acc:A0A178UIV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.