CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
peroxisome 1
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56816	Soybean	plastid	94.4	94.51
GSMUA_Achr9P07100_001	Banana	mitochondrion, plasma membrane	42.87	63.31
TraesCS1A01G284600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	46.89	48.61
TraesCS1B01G293900.1	Wheat	cytosol, peroxisome, plasma membrane	47.5	48.21
TraesCS1D01G283600.1	Wheat	cytosol, peroxisome, plasma membrane	47.38	48.02
Zm00001d029861_P002	Maize	plastid	43.73	47.55
OQU92169	Sorghum	peroxisome, plastid	47.02	46.12
KRH33894	Soybean	cytosol	44.09	43.88
KRH41250	Soybean	cytosol	47.02	41.02
KRH68525	Soybean	cytosol	43.97	40.79
KRG96816	Soybean	cytosol	43.97	40.7
KRG92895	Soybean	extracellular, mitochondrion	43.97	40.61
KRH49079	Soybean	cytosol	42.27	40.4
KRH59983	Soybean	cytosol, nucleus, plasma membrane	46.28	40.38
KRH77593	Soybean	cytosol	45.19	40.02
KRH27880	Soybean	cytosol	45.07	39.91
KRH37549	Soybean	cytosol	44.58	39.44
KRH12608	Soybean	cytosol	44.58	39.1
KRH41026	Soybean	mitochondrion	41.05	37.95
KRH59706	Soybean	cytosol	41.29	37.75
KRH63901	Soybean	cytosol, nucleus, plasma membrane	42.63	37.72
KRH54051	Soybean	cytosol, nucleus, plasma membrane	42.39	36.98
KRH03224	Soybean	peroxisome	16.44	18.72
KRH57132	Soybean	plasma membrane	14.62	18.43
KRH35248	Soybean	plasma membrane	14.49	16.69
KRH06603	Soybean	plasma membrane	14.37	16.43
KRH35246	Soybean	plasma membrane	14.01	16.38
KRH48086	Soybean	plasma membrane	14.01	16.02
KRH36697	Soybean	plasma membrane	13.89	15.53
KRH00822	Soybean	plasma membrane	13.52	15.48
KRH11700	Soybean	plasma membrane	13.4	15.03

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	EntrezGene:100798603	Gene3D:2.40.30.10	Gene3D:3.40.50.80	EMBL:ACUP02010335
InterPro:EF-hand-dom_pair	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	EnsemblPlantsGene:GLYMA_17G078300
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114
GO:GO:0098869	UniProt:I1MT65	InterPro:IPR017927	EnsemblPlants:KRH03132	ProteinID:KRH03132	ProteinID:KRH03132.1
InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF127	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	UniParc:UPI0002954571	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:6103499..6110894

Molecular Weight (calculated)

93206.7 Da

IEP (calculated)

9.955

GRAVY (calculated)

-0.163

Length

821 amino acids

Sequence
(BLAST)

001: MDGLVKSQVP HERSLLALFK SSPSSSSLSS SFSSSWTSEV VLQTRSKIRR EGEPNNVADL RSEQTRSHII ENEAIQGVGF INGIDGHSGM EWKDLEKRFD
101: QVARTGSGAE PVVTWSEFGF CIGMHSSPEF ANELLRALRR GKGWKSNITK TDLYHLWFRM KDNSFNSRMR IFFDMCNRNK DGRITETDIK QTILLTASTN
201: KLSVTHDEAE DYASLIMKFL DKKNKGYIEI SQMGSLFKAT NLSNSKAHSP MKQVSSVGSS THNVLHNTSG DFCEEQQEPM SRTEVLFRTY WRRAWIVLVW
301: LLACLGLFVW KFVQYRHRSG FEVMGYCLPT AKGAAETLKL NMALVLLPVC RNTITWLRKH RPINSVVPFN DNINFHKLIA GGIVVGVILH GGTHLACDFP
401: RISESDKSIF RQTIAAGFGY HRPTYTQILA TTEVASGIGM VVLMGIAFAL AAKWPRRRSP VLPVSLRRVT GYNTFWYSHH LFVLVYALLI IHSMFLFLTD
501: KLMEKTTWMY IAFPVLLYAG ERIFRAIRSG SYEVDILKAS ICPGKVLYLK MQKPEGFKFH SGMYIFIQCP QISPFEWHPF SLTSGPQDDY LSVHIRTLGD
601: WSYQIYDLFQ EAVLSRSKGC PKLYIDGPYG SAAQDHVKYD ILVLIGLGIG ATPFISILKD VVKGVQTTQN DHSGLRQCSL TKGPLKAYLY WVTREPNSFD
701: WFRDVMKEIS NSTKKQSVVE MHNFLTSVHP EGDIRSALLS VIQALHVAKN GTDIVSRTQI HTHFARPNWF NIFSRLARKH GGAKIGVFYC GPSKLARELK
801: KLCTKFSTKT TTRFVFHKEN Y

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.