CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026254	Potato	plasma membrane	61.25	60.99
PGSC0003DMT400024558	Potato	plasma membrane, vacuole	61.25	60.82
AT5G23980.1	Thale cress	plasma membrane	57.55	57.8
AT5G23990.2	Thale cress	endoplasmic reticulum, plasma membrane	56.98	57.22
CDY46972	Canola	plasma membrane, vacuole	56.7	57.02
Bra029389.1-P	Field mustard	plasma membrane	56.55	56.88
CDX88061	Canola	plasma membrane	53.56	56.8
CDY44266	Canola	plasma membrane, vacuole	56.27	56.59
GSMUA_Achr8P12260_001	Banana	peroxisome	39.89	56.0
GSMUA_Achr8P12300_001	Banana	extracellular, peroxisome, plastid	17.52	53.95
KRH48086	Soybean	plasma membrane	53.13	51.95
KRH00822	Soybean	plasma membrane	52.56	51.46
GSMUA_Achr8P12250_001	Banana	plasma membrane	51.57	51.13
KRH35248	Soybean	plasma membrane	51.42	50.63
Bra009719.1-P	Field mustard	golgi, plasma membrane	35.33	50.1
KRH06603	Soybean	plasma membrane	51.14	50.0
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	8.55	47.24
TraesCS2B01G414300.1	Wheat	plasma membrane	47.58	46.2
TraesCS2D01G393700.1	Wheat	plasma membrane	47.44	46.12
Os04t0578600-01	Rice	golgi, mitochondrion, vacuole	29.34	45.88
HORVU2Hr1G094150.3	Barley	golgi, plasma membrane	17.52	44.09
TraesCS2A01G396000.1	Wheat	plasma membrane	47.72	43.17
CDY68445	Canola	plastid	32.34	42.99
VIT_16s0050g00990.t01	Wine grape	plastid	69.8	41.6
GSMUA_Achr8P12270_001	Banana	plasma membrane	50.28	38.79
KRH11700	Soybean	plasma membrane	31.48	30.19
KRH36697	Soybean	plasma membrane	31.34	29.97
KRH57132	Soybean	plasma membrane	27.49	29.65
KRH03224	Soybean	peroxisome	29.2	28.43
KRH27880	Soybean	cytosol	20.23	15.32
KRH77593	Soybean	cytosol	19.94	15.1
KRH59983	Soybean	cytosol, nucleus, plasma membrane	20.23	15.09
KRH33894	Soybean	cytosol	17.52	14.91
KRH41250	Soybean	cytosol	19.94	14.88
KRH12608	Soybean	cytosol	19.37	14.53
KRH68525	Soybean	cytosol	18.09	14.35
KRH56816	Soybean	plastid	16.67	14.27
KRH37549	Soybean	cytosol	18.8	14.22
KRG96816	Soybean	cytosol	17.95	14.21
KRH03132	Soybean	plastid	16.38	14.01
KRG92895	Soybean	extracellular, mitochondrion	17.52	13.84
KRH59706	Soybean	cytosol	17.66	13.81
KRH41026	Soybean	mitochondrion	17.38	13.74
KRH63901	Soybean	cytosol, nucleus, plasma membrane	18.09	13.69
KRH49079	Soybean	cytosol	16.52	13.5
KRH54051	Soybean	cytosol, nucleus, plasma membrane	18.09	13.5

Protein Annotations

MapMan:25.4.2.1	MapMan:25.5.2.1	Gene3D:3.40.50.80	EMBL:ACUP02006661	InterPro:Cyt_b245_heavy_chain	InterPro:FAD-bd_8
InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	EnsemblPlantsGene:GLYMA_10G231600	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0055114	UniProt:I1LDM6	InterPro:IPR017927	EnsemblPlants:KRH35246	ProteinID:KRH35246	ProteinID:KRH35246.1
PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PRINTS:PR00466	PFscan:PS51384	PANTHER:PTHR11972
PANTHER:PTHR11972:SF62	SUPFAM:SSF52343	TMHMM:TMhelix	UniParc:UPI00023CE692	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:46121830..46127235

Molecular Weight (calculated)

80580.0 Da

IEP (calculated)

9.419

GRAVY (calculated)

0.249

Length

702 amino acids

Sequence
(BLAST)

001: MRSHTFLRIT SLLVFIGWLT VWILLPTKVY KNTWTPKLKT KLNSTYFREQ GTNLLLFTFP VMLIGALSCI YLHLHEKGTE KLPSKSGGVV NRWLCFLRRP
101: FLVMSPIGIV TSMEIIFALM FVALLIWSLS NYLHTSFGHL HMHKEGEKVW QAKFRSVSLR LGYIGNICWA FLFFPVTRGS SILPLVGLTS ESSIKYHIWL
201: GHLSNVLFAA HTVGFFIYWG ITHQMKETLE WSKTYVSNVA GVIAILIALV MWVTSFPGFR RKMYEVFFYT HHLYTLYILF YAMHVGVEWM CMISPGIFLF
301: LIDRHLRFLQ SRQCAPLLSA RLLPCGALEL NFSKNPSLYY NPTSMVFINV PKISKLQWHP FTVISSCNME TDILSVAVKT GGSWSNKLYQ ELSSSALDHL
401: NVSVEGPYGP TTTSQFLRYK QLVLVSGGSG ITPFISIIRD LIFQNRQEQE SHVPKVLLVC AFKNSADLTM LDLLLPLFVS TTQFSNLHQL QIEAYITREK
501: EEAPRDSQKQ IQTKWFKPIL SDSPISLVLG PNNWLWLGAI ISSSFLMFLL LLGIITRYYI YPIENNSDEV YHWTFKVLWF MFLLCAVICI CSSAVFLWWK
601: RQNSLESKQI MNVEFPTPTR SPGSWIYGSE RELESLPHQS LVQATNVHFG ARPDLKKILF ECKDKDIGVL VSGPRSMRHE VGKICASGLA DNLHFESFSF
701: TW

Best Arabidopsis Sequence Match ( AT5G23980.1 )
(BLAST)

001: MGNMRSLVKT LMVVLFLGWI LVWIMISTNL FKSKWTPKLS KYLNTTYFGP QGTNLVLLTV PMMFIAVLSC VYLHIQKKPT QPQREWKLKR IMGRVIMVMN
101: PLGIVTATEL TFSLLFVALL AWSLYNYLYL SYHVHLHNDD NAKIWQAKFR AFGLRIGYVG NICWAFLFFP VTRASTILPL VGLTSESSIK YHIWLGHVSN
201: FCFLVHTVVF LIYWAMINKL METFAWNPTY VPNLAGTIAM VIGIAMWVTS LPSFRRKKFE IFFYTHHLYG LYIVFYVIHV GDSWFCMILP NIFLFFIDRY
301: LRFLQSTKRS RLVSARILPS DNLELTFSKT PGLHYTPTSI LFLHVPSISK IQWHPFTITS SSNLEKDTLS VVIRRQGSWT QKLYTHLSSS IDSLEVSTEG
401: PYGPNSFDVS RHNSLILVSG GSGITPFISV IRELISQSQN KSTKLPDVLL VCSFKHYHDL AFLDLIFPLD MSASDISRLN LRIEAYITRE DKKPETTDDH
501: RLLQTKWFKP QPLDSPISPV LGPNNFLWLG VVILSSFVMF LLLIGIVTRY YIYPVDHNTG SIYNFSYRGL WDMFLGSACI FISSSVVFLW RKKQNKEGDK
601: EFKNQVQSVE FQTPTSSPGS WFHGHERELE SVPYQSIVQA TSVHFGSKPN LKKILLEAEG SEDVGVMVCG PRKMRHEVAK ICSSGLAKNL HFEAISFNW

Arabidopsis Description

FRO4Ferric reduction oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W110]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.