Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59983 | Soybean | cytosol, nucleus, plasma membrane | 97.24 | 97.24 |
| KRH27880 | Soybean | cytosol | 84.48 | 85.76 |
| KRH77593 | Soybean | cytosol | 84.27 | 85.54 |
| VIT_02s0025g00510.t01 | Wine grape | cytosol | 83.85 | 83.67 |
| PGSC0003DMT400032088 | Potato | cytosol, nucleus, peroxisome | 15.41 | 81.01 |
| Solyc08g081690.2.1 | Tomato | cytosol | 80.98 | 79.13 |
| AT1G64060.1 | Thale cress | cytosol | 78.11 | 77.86 |
| Bra027764.1-P | Field mustard | mitochondrion | 77.68 | 77.11 |
| GSMUA_Achr9P05450_001 | Banana | mitochondrion | 71.31 | 77.04 |
| CDY08347 | Canola | mitochondrion | 77.15 | 76.91 |
| GSMUA_Achr6P31850_001 | Banana | mitochondrion | 71.73 | 75.67 |
| CDY38202 | Canola | mitochondrion | 74.71 | 74.55 |
| HORVU3Hr1G069690.1 | Barley | mitochondrion | 9.46 | 73.55 |
| EES01429 | Sorghum | mitochondrion | 72.9 | 72.67 |
| Zm00001d043543_P002 | Maize | mitochondrion | 72.69 | 72.53 |
| TraesCS3B01G314000.2 | Wheat | mitochondrion | 71.41 | 71.19 |
| TraesCS3D01G279900.1 | Wheat | mitochondrion | 71.41 | 71.04 |
| Zm00001d038762_P001 | Maize | plastid | 71.09 | 70.57 |
| KXG22389 | Sorghum | mitochondrion | 71.09 | 69.91 |
| TraesCS1A01G347700.1 | Wheat | mitochondrion | 70.46 | 68.99 |
| TraesCS3A01G280200.1 | Wheat | mitochondrion | 71.52 | 68.95 |
| TraesCS1D01G350600.1 | Wheat | mitochondrion | 70.67 | 68.7 |
| TraesCS1B01G362200.1 | Wheat | mitochondrion | 70.56 | 68.31 |
| KRH33894 | Soybean | cytosol | 54.3 | 61.94 |
| KRH68525 | Soybean | cytosol | 54.52 | 57.97 |
| KRG92895 | Soybean | extracellular, mitochondrion | 54.62 | 57.82 |
| KRG96816 | Soybean | cytosol | 54.2 | 57.5 |
| KRH37549 | Soybean | cytosol | 56.0 | 56.79 |
| Os01t0734200-00 | Rice | mitochondrion, nucleus | 19.02 | 56.47 |
| KRH12608 | Soybean | cytosol | 56.11 | 56.41 |
| KRH63901 | Soybean | cytosol, nucleus, plasma membrane | 54.62 | 55.39 |
| KRH54051 | Soybean | cytosol, nucleus, plasma membrane | 54.2 | 54.2 |
| KRH41026 | Soybean | mitochondrion | 51.01 | 54.05 |
| KRH59706 | Soybean | cytosol | 51.33 | 53.79 |
| KRH49079 | Soybean | cytosol | 45.59 | 49.94 |
| KRH03132 | Soybean | plastid | 41.02 | 47.02 |
| KRH56816 | Soybean | plastid | 40.49 | 46.46 |
| KRH35246 | Soybean | plasma membrane | 14.88 | 19.94 |
| KRH03224 | Soybean | peroxisome | 14.88 | 19.42 |
| KRH48086 | Soybean | plasma membrane | 14.56 | 19.08 |
| KRH00822 | Soybean | plasma membrane | 14.45 | 18.97 |
| KRH06603 | Soybean | plasma membrane | 14.45 | 18.94 |
| KRH57132 | Soybean | plasma membrane | 13.07 | 18.89 |
| KRH35248 | Soybean | plasma membrane | 14.03 | 18.51 |
| KRH36697 | Soybean | plasma membrane | 13.92 | 17.85 |
| KRH11700 | Soybean | plasma membrane | 13.71 | 17.62 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:10.1.1 | EntrezGene:100801077 | Gene3D:2.40.30.10 | EMBL:ACUP02004756 | ncoils:Coil |
| InterPro:Cyt_b245_heavy_chain | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:FAD-bd_8 | InterPro:Fd_Rdtase_FAD-bd |
| InterPro:Fe3_Rdtase_TM_dom | InterPro:Fe_red_NAD-bd_6 | EnsemblPlantsGene:GLYMA_08G018900 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0050664 | GO:GO:0055114 | GO:GO:0098869 |
| UniProt:I1KPG0 | InterPro:IPR002048 | InterPro:IPR017927 | EnsemblPlants:KRH41250 | ProteinID:KRH41250 | ProteinID:KRH41250.1 |
| InterPro:NADPH_Ox | PFAM:PF01794 | PFAM:PF08022 | PFAM:PF08030 | PFAM:PF08414 | PRINTS:PR00466 |
| ScanProsite:PS00018 | PFscan:PS50222 | PFscan:PS51384 | PANTHER:PTHR11972 | PANTHER:PTHR11972:SF66 | InterPro:Riboflavin_synthase-like_b-brl |
| SUPFAM:SSF47473 | SUPFAM:SSF52343 | SUPFAM:SSF63380 | TMHMM:TMhelix | UniParc:UPI000233914B | SEG:seg |
Description
hypothetical protein
Coordinates
chr8:+:1536958..1546485
Molecular Weight (calculated)
106837.0 Da
IEP (calculated)
9.769
GRAVY (calculated)
-0.248
Length
941 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGIPRHERR WASDSVPGKA TVSAGTSPGT ESNSAAEEFV EVTLDLQDDD TIVLRSVEPA SVISIDDSVA GSGNQTPASV SRSPTIRRSS SRGFRQFSQE
101: LKAEAVAKAR QFSQELRRFS WSHGHASRAL SSSSAPNGAG AGFETALAAR ALRKQRAQLD RTRSGAHKAL RGLKFISNRS NGVDAWNEVQ SNFDRLAKDG
201: FLNRTDFAQC IGMKDSKEFA LELFDALSRK RRLRTDKISR EELFEFWSQI TDQSFDSRLQ IFFDMVDKNE DGRITEEEVK EIILLSASAN RLSRLQEQAE
301: EYAALIMEEL DPEGLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRKKSPI RRMSRRLVYY LQENWRRLWV LTLWVSIMIG LFTWKFIQYK
401: NKDAFQIMGY CLLTAKGAAE TLKFNMALIL LPVCRNTITW LRSTKLGYVV PFDDNINFHK TIAGAIVIGI ILHAGDHLAC DFPRLVSTSE ERYEKYLKGV
501: FGDHKPSYVD LVKGVEGVTG ILMVFLMIIA FTLATKWFRR NLIKLPKPFS RLTGFNAFWY SHHLFVIVYV LLIIHGIKLY LVHKWYHKTT WMYLAVPVLL
601: YASERILRLF RSGLYTVRLG KVAIYPGNVL TLQMSKPPQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPG DDYLSVHIRQ LGDWTQELKR VFSEACEPPV
701: SGKSGLLRAD ETTKKSLPKL KIDGPYGAPA QDYKKYDVLL LVGLGIGATP FISILKDLLK NIIKMEEMAD SISDISRGSD LSVGSTTDSP SLNKNAPKRK
801: KTLKTTNAYF YWVTREQGSF DWFKGVMNEV AELDQRGVIE MHNYLTSVYE EGDARSALIT MVQALNHAKN GVDIVSGTRV RTHFARPNWK KVFSKMCSKH
901: CNGRIGVFYC GAPVLARELS KLCFEFNEKG PTKFEFHKEH F
101: LKAEAVAKAR QFSQELRRFS WSHGHASRAL SSSSAPNGAG AGFETALAAR ALRKQRAQLD RTRSGAHKAL RGLKFISNRS NGVDAWNEVQ SNFDRLAKDG
201: FLNRTDFAQC IGMKDSKEFA LELFDALSRK RRLRTDKISR EELFEFWSQI TDQSFDSRLQ IFFDMVDKNE DGRITEEEVK EIILLSASAN RLSRLQEQAE
301: EYAALIMEEL DPEGLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRKKSPI RRMSRRLVYY LQENWRRLWV LTLWVSIMIG LFTWKFIQYK
401: NKDAFQIMGY CLLTAKGAAE TLKFNMALIL LPVCRNTITW LRSTKLGYVV PFDDNINFHK TIAGAIVIGI ILHAGDHLAC DFPRLVSTSE ERYEKYLKGV
501: FGDHKPSYVD LVKGVEGVTG ILMVFLMIIA FTLATKWFRR NLIKLPKPFS RLTGFNAFWY SHHLFVIVYV LLIIHGIKLY LVHKWYHKTT WMYLAVPVLL
601: YASERILRLF RSGLYTVRLG KVAIYPGNVL TLQMSKPPQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPG DDYLSVHIRQ LGDWTQELKR VFSEACEPPV
701: SGKSGLLRAD ETTKKSLPKL KIDGPYGAPA QDYKKYDVLL LVGLGIGATP FISILKDLLK NIIKMEEMAD SISDISRGSD LSVGSTTDSP SLNKNAPKRK
801: KTLKTTNAYF YWVTREQGSF DWFKGVMNEV AELDQRGVIE MHNYLTSVYE EGDARSALIT MVQALNHAKN GVDIVSGTRV RTHFARPNWK KVFSKMCSKH
901: CNGRIGVFYC GAPVLARELS KLCFEFNEKG PTKFEFHKEH F
001: MKPFSKNDRR RWSFDSVSAG KTAVGSASTS PGTEYSINGD QEFVEVTIDL QDDDTIVLRS VEPATAINVI GDISDDNTGI MTPVSISRSP TMKRTSSNRF
101: RQFSQELKAE AVAKAKQLSQ ELKRFSWSRS FSGNLTTTST AANQSGGAGG GLVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKQ KNVDGWNDVQ
201: SNFEKFEKNG YIYRSDFAQC IGMKDSKEFA LELFDALSRR RRLKVEKINH DELYEYWSQI NDESFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLSASAN
301: KLSRLKEQAE EYAALIMEEL DPERLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRGKSRI HRMSSDFVYI MQENWKRIWV LSLWIMIMIG
401: LFLWKFFQYK QKDAFHVMGY CLLTAKGAAE TLKFNMALIL FPVCRNTITW LRSTRLSYFV PFDDNINFHK TIAGAIVVAV ILHIGDHLAC DFPRIVRATE
501: YDYNRYLFHY FQTKQPTYFD LVKGPEGITG ILMVILMIIS FTLATRWFRR NLVKLPKPFD RLTGFNAFWY SHHLFVIVYI LLILHGIFLY FAKPWYVRTT
601: WMYLAVPVLL YGGERTLRYF RSGSYSVRLL KVAIYPGNVL TLQMSKPTQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPE DDYISIHIRQ LGDWTQELKR
701: VFSEVCEPPV GGKSGLLRAD ETTKKSLPKL LIDGPYGAPA QDYRKYDVLL LVGLGIGATP FISILKDLLN NIVKMEEHAD SISDFSRSSE YSTGSNGDTP
801: RRKRILKTTN AYFYWVTREQ GSFDWFKGVM NEVAELDQRG VIEMHNYLTS VYEEGDARSA LITMVQALNH AKNGVDIVSG TRVRTHFARP NWKKVLTKLS
901: SKHCNARIGV FYCGVPVLGK ELSKLCNTFN QKGSTKFEFH KEHF
101: RQFSQELKAE AVAKAKQLSQ ELKRFSWSRS FSGNLTTTST AANQSGGAGG GLVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKQ KNVDGWNDVQ
201: SNFEKFEKNG YIYRSDFAQC IGMKDSKEFA LELFDALSRR RRLKVEKINH DELYEYWSQI NDESFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLSASAN
301: KLSRLKEQAE EYAALIMEEL DPERLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRGKSRI HRMSSDFVYI MQENWKRIWV LSLWIMIMIG
401: LFLWKFFQYK QKDAFHVMGY CLLTAKGAAE TLKFNMALIL FPVCRNTITW LRSTRLSYFV PFDDNINFHK TIAGAIVVAV ILHIGDHLAC DFPRIVRATE
501: YDYNRYLFHY FQTKQPTYFD LVKGPEGITG ILMVILMIIS FTLATRWFRR NLVKLPKPFD RLTGFNAFWY SHHLFVIVYI LLILHGIFLY FAKPWYVRTT
601: WMYLAVPVLL YGGERTLRYF RSGSYSVRLL KVAIYPGNVL TLQMSKPTQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPE DDYISIHIRQ LGDWTQELKR
701: VFSEVCEPPV GGKSGLLRAD ETTKKSLPKL LIDGPYGAPA QDYRKYDVLL LVGLGIGATP FISILKDLLN NIVKMEEHAD SISDFSRSSE YSTGSNGDTP
801: RRKRILKTTN AYFYWVTREQ GSFDWFKGVM NEVAELDQRG VIEMHNYLTS VYEEGDARSA LITMVQALNH AKNGVDIVSG TRVRTHFARP NWKKVLTKLS
901: SKHCNARIGV FYCGVPVLGK ELSKLCNTFN QKGSTKFEFH KEHF
Arabidopsis Description
RBOHFRespiratory burst oxidase homolog protein F [Source:UniProtKB/Swiss-Prot;Acc:O48538]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.