Factsheet for GSMUA_Achr9P05450_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr3P09340_001
GSMUA_Achr7P21500_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64060.1	GSMUA_Achr11P...	AT5G21326.1	23162070
AT1G64060.1	GSMUA_Achr3P09340_001	AT5G21326.1	23162070
AT1G64060.1	GSMUA_Achr7P21500_001	AT5G21326.1	23162070

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P31850_001	Banana	mitochondrion	89.44	87.33
Os01t0734466-01	Rice	peroxisome, plasma membrane	50.17	81.53
VIT_02s0025g00510.t01	Wine grape	cytosol	79.1	73.06
Zm00001d043543_P002	Maize	mitochondrion	78.3	72.32
EES01429	Sorghum	mitochondrion	78.19	72.14
HORVU3Hr1G069780.1	Barley	mitochondrion	76.92	71.5
KRH59983	Soybean	cytosol, nucleus, plasma membrane	77.15	71.41
KRH41250	Soybean	cytosol	77.04	71.31
KRH27880	Soybean	cytosol	75.66	71.09
TraesCS3B01G314000.2	Wheat	mitochondrion	77.04	71.08
TraesCS3D01G279900.1	Wheat	mitochondrion	77.15	71.04
Zm00001d038762_P001	Maize	plastid	77.27	70.99
PGSC0003DMT400032088	Potato	cytosol, nucleus, peroxisome	14.58	70.95
KRH77593	Soybean	cytosol	75.43	70.87
Os05t0528000-01	Rice	mitochondrion	76.81	70.35
KXG22389	Sorghum	mitochondrion	77.04	70.11
TraesCS1A01G347700.1	Wheat	mitochondrion	75.89	68.78
TraesCS3A01G280200.1	Wheat	mitochondrion	77.04	68.75
TraesCS1D01G350600.1	Wheat	mitochondrion	76.35	68.7
Solyc08g081690.2.1	Tomato	cytosol	75.78	68.54
TraesCS1B01G362200.1	Wheat	mitochondrion	76.35	68.42
CDY08347	Canola	mitochondrion	73.71	68.01
AT1G64060.1	Thale cress	cytosol	73.48	67.8
Bra027764.1-P	Field mustard	mitochondrion	73.59	67.62
GSMUA_Achr6P11760_001	Banana	golgi	30.54	65.2
CDY38202	Canola	mitochondrion	70.15	64.79
HORVU1Hr1G081950.8	Barley	plastid	72.22	64.71
GSMUA_Achr10P...	Banana	plasma membrane	38.46	64.3
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome	21.58	63.73
GSMUA_Achr5P29250_001	Banana	cytosol	48.91	59.0
GSMUA_AchrUn_...	Banana	cytosol	15.27	58.33
GSMUA_Achr6P16270_001	Banana	cytosol	56.37	57.03
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	54.53	56.95
GSMUA_Achr3P05840_001	Banana	mitochondrion	57.86	56.63
GSMUA_Achr8P23680_001	Banana	mitochondrion	57.41	56.12
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	53.27	55.64
GSMUA_Achr10P...	Banana	cytosol	56.95	53.97
GSMUA_AchrUn_...	Banana	cytosol	26.75	53.2
GSMUA_Achr9P07100_001	Banana	mitochondrion, plasma membrane	33.87	53.06
GSMUA_Achr10P...	Banana	cytosol	50.75	52.37
GSMUA_Achr6P11770_001	Banana	cytosol	24.11	52.24
GSMUA_Achr11P...	Banana	mitochondrion	29.51	49.05
GSMUA_Achr10P...	Banana	nucleus, plastid	15.61	48.75
GSMUA_Achr8P12260_001	Banana	peroxisome	10.91	19.0
GSMUA_Achr8P12250_001	Banana	plasma membrane	15.38	18.93
GSMUA_Achr11P...	Banana	plasma membrane	15.38	18.33
GSMUA_Achr6P28010_001	Banana	plasma membrane, plastid	15.04	16.9
GSMUA_Achr8P12270_001	Banana	plasma membrane	15.96	15.27
GSMUA_Achr8P12300_001	Banana	extracellular, peroxisome, plastid	2.76	10.53

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	ncoils:Coil	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSMUA_Achr9G05450_001	EnsemblPlants:GSMUA_Achr9P05450_001	EnsemblPlants:GSMUA_Achr9T05450_001
InterPro:IPR002048	InterPro:IPR017927	UniProt:M0TXQ4	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022
PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF66	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	UniParc:UPI0002960723	:	:	:	:

Description

Respiratory burst oxidase homolog protein F [Source:GMGC_GENE;Acc:GSMUA_Achr9G05450_001]

Coordinates

chr9:-:3518113..3523249

Molecular Weight (calculated)

99525.0 Da

IEP (calculated)

9.315

GRAVY (calculated)

-0.210

Length

871 amino acids

Sequence
(BLAST)

001: MRSSARHERR WASDTVPRGS AISAGSSPGT SGKAPDESEE EFVEVTLDLQ GDDTIVLRSV EPAFEDLKAE LKRFTWGHGP SRAAQLDRSR SGAKKALRGL
101: RFISGNKANG VDAWNEVQSN FDKLARDGYL SRSDFAQCIG MRDSKEFALE LFDALTRRRR LNAERIGKEE LHEFWCQITD QSFDSRLEIF FDMVDKNEDG
201: RITEEEVKEI IMLSASANKL SRLKEQAEEY AALIMEELDP ERLGYIELWQ LETLLLQRDT YLNYSQALSY TSQALSQNLA GLRKKGPIRK LSTKLGYYLE
301: ENWKRLWVMA LWIGVMAGLF SWKFIQYRNR YAFQVMGYCI TTAKGAAETL KFNMALILLP VCRNTITWLR STRLARALPF DDNINFHKTI AAAIVVGVIL
401: HAGVHVTCDF PHLISASREK YAPLSPYFGK TKPTYLDLVR GLEGVTGIIM VVCMLVAFTL ATHWFRRSLV RFPKPLDRLT GFNAFWYSHH LFVIVYVLLI
501: VHGERLYLIH EWYRKTTWMY LAVPLLLYVG ERSLRALRSG YYSVRLLKVA IYPGNVLTLQ MSKPVAFRYK SGQYMFVQCP AVSPFEWHPF SITSAPGDDY
601: LSVHIRQLGD WTRELRRVFA AACEPPVAGK SGLLRADEAT KKSLPKLLID GPYGAPAQDY KKYDVLLLVG LGIGATPFIS ILKDLLNNIV KMEEENVSAT
701: TPFINDCPPK PQNGERVDLA TLMRASRRVT WTLRTTNAYF YWVTREQGSF DWFKGVMNEV AELDQRGVIE MHNYLTSVYE EGDARSALIT MIQALNHAKN
801: GVDIVSGTRV RTHFARPNWK KVFSRICSKH PYAKIGVFYC GAPVLAQELN KLCYEYNQKS STRFEFHKEH F

Best Arabidopsis Sequence Match ( AT1G64060.1 )
(BLAST)

001: MKPFSKNDRR RWSFDSVSAG KTAVGSASTS PGTEYSINGD QEFVEVTIDL QDDDTIVLRS VEPATAINVI GDISDDNTGI MTPVSISRSP TMKRTSSNRF
101: RQFSQELKAE AVAKAKQLSQ ELKRFSWSRS FSGNLTTTST AANQSGGAGG GLVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKQ KNVDGWNDVQ
201: SNFEKFEKNG YIYRSDFAQC IGMKDSKEFA LELFDALSRR RRLKVEKINH DELYEYWSQI NDESFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLSASAN
301: KLSRLKEQAE EYAALIMEEL DPERLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRGKSRI HRMSSDFVYI MQENWKRIWV LSLWIMIMIG
401: LFLWKFFQYK QKDAFHVMGY CLLTAKGAAE TLKFNMALIL FPVCRNTITW LRSTRLSYFV PFDDNINFHK TIAGAIVVAV ILHIGDHLAC DFPRIVRATE
501: YDYNRYLFHY FQTKQPTYFD LVKGPEGITG ILMVILMIIS FTLATRWFRR NLVKLPKPFD RLTGFNAFWY SHHLFVIVYI LLILHGIFLY FAKPWYVRTT
601: WMYLAVPVLL YGGERTLRYF RSGSYSVRLL KVAIYPGNVL TLQMSKPTQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPE DDYISIHIRQ LGDWTQELKR
701: VFSEVCEPPV GGKSGLLRAD ETTKKSLPKL LIDGPYGAPA QDYRKYDVLL LVGLGIGATP FISILKDLLN NIVKMEEHAD SISDFSRSSE YSTGSNGDTP
801: RRKRILKTTN AYFYWVTREQ GSFDWFKGVM NEVAELDQRG VIEMHNYLTS VYEEGDARSA LITMVQALNH AKNGVDIVSG TRVRTHFARP NWKKVLTKLS
901: SKHCNARIGV FYCGVPVLGK ELSKLCNTFN QKGSTKFEFH KEHF

Arabidopsis Description

RBOHFRespiratory burst oxidase homolog protein F [Source:UniProtKB/Swiss-Prot;Acc:O48538]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.