Factsheet for HORVU3Hr1G069780.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G069690.1	Barley	mitochondrion	12.91	100.0
TraesCS3D01G279900.1	Wheat	mitochondrion	97.33	96.41
TraesCS3B01G314000.2	Wheat	mitochondrion	97.12	96.4
TraesCS3A01G280200.1	Wheat	mitochondrion	96.69	92.83
Os01t0734466-01	Rice	peroxisome, plasma membrane	52.29	91.42
EES01429	Sorghum	mitochondrion	87.83	87.18
Zm00001d043543_P002	Maize	mitochondrion	87.73	87.17
GSMUA_Achr9P05450_001	Banana	mitochondrion	71.5	76.92
GSMUA_Achr6P31850_001	Banana	mitochondrion	71.61	75.22
HORVU1Hr1G081950.8	Barley	plastid	76.41	73.66
HORVU4Hr1G086500.1	Barley	cytosol	48.99	54.32
HORVU5Hr1G062490.8	Barley	plasma membrane	54.96	52.18
HORVU4Hr1G081670.1	Barley	cytosol	53.47	51.28
HORVU3Hr1G087210.4	Barley	peroxisome, plastid	47.28	51.15
HORVU6Hr1G035970.2	Barley	mitochondrion	50.8	49.63
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	23.91	48.59
HORVU5Hr1G024550.3	Barley	cytosol	44.5	48.54
HORVU1Hr1G072160.5	Barley	cytosol	46.64	46.74
HORVU3Hr1G037600.3	Barley	cytosol, peroxisome, plastid	21.66	44.23
HORVU1Hr1G071340.13	Barley	mitochondrion, peroxisome, plastid	47.07	43.62
HORVU1Hr1G072140.1	Barley	cytosol	43.01	43.38
HORVU5Hr1G078630.1	Barley	cytosol	40.88	39.69
HORVU0Hr1G013380.4	Barley	plastid	32.12	38.3
HORVU2Hr1G094150.3	Barley	golgi, plasma membrane	6.4	21.51
HORVU2Hr1G077650.1	Barley	peroxisome, plastid	13.02	16.42

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	EMBL:AK364352	EMBL:AK366338	EMBL:AK370971
ncoils:Coil	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	UniProt:F2DKD4
InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114
GO:GO:0098869	EnsemblPlantsGene:HORVU3Hr1G069780	EnsemblPlants:HORVU3Hr1G069780.1	InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox
PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018
PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF66	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473
SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI00020065A0	SEG:seg	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DKD4]

Coordinates

chrchr3H:-:528606382..528613529

Molecular Weight (calculated)

105843.0 Da

IEP (calculated)

9.483

GRAVY (calculated)

-0.224

Length

937 amino acids

Sequence
(BLAST)

001: MRGGASAGQP RWGSAGTTPR SLSTGSSPRG SEPCSEDGEE LVEVTLDLQD DDTIVLRSVE PAAASASGPG APRPPADGAS SSSTSSRSPS MRRTSSYRLL
101: QLSQELMAGA RHLSHDLTKR FSRSHSHSRD DAHHHQHQPP SGIESALAAR AARRQRAQLD RTRSGAHRAL RGLRFISSNK ASNAWREVQA NFDRLARDGH
201: LSRSDFAECI GMTESKEFAL ELFDTLSRRR QMKLDTISKE ELREIWQQIT DNSFDSRLQI FFDMVDKNAD GRIGEAEVKE IIMLSASANK LSRLKEQAEE
301: YAALIMEELD PEELGYIELW QLETLLLQKD TYVNYSQALS YTSQALSQNL ALRKRGSIRK IGNSLIYYLE DNWKRLWVLA LWIGIMAGLF TWKFIQYRER
401: YVFSVMGYCV TTAKGAAETL KLNMAIILLP VCRNTITWLR NTRAARVLPF DDNINFHKTI AAAIVVGVIL HAGNHLVCDF PRLIRSSEET YAPLGIYFGE
501: TKPTYLALIK GVEGITGIIM VVCMIIAFTL ATRWFRRSLV KLPKPFDKLT GFNAFWYSHH LFAIVYVALI VHGQCVYLIR VWYRKSTWMY LAVPVCLYLG
601: ERILRFFRSG SYAVRLLKVA IYPGNVLTLQ MTKPATFRYK SGQYMFVQCP AVSPFEWHPF SITSAPGDEY LSIHVRQLGD WTRELKRVFS AACEPPVSGK
701: SGLLRADETT KKTLPKLLID GPYGSPAQDY GKYDVLLLVG LGIGATPFIS ILKDLLNNII KMEEEEDTST DLYPPVGRNK PHVDLGTLMR VTTRPKKVLK
801: TTNAYFYWVT REQGSFDWFK GVMNEIAEMD QRNIIEMHNY LTSVYEEGDA RSALITMLQA LNHAKNGVDV VSGTKVRTHF ARPNWKKVLA KIASKHPYAK
901: IGVFYCGAPV LAQELAKLCH EFNGKCTTKF EFHKEYF

Best Arabidopsis Sequence Match ( AT1G64060.1 )
(BLAST)

001: MKPFSKNDRR RWSFDSVSAG KTAVGSASTS PGTEYSINGD QEFVEVTIDL QDDDTIVLRS VEPATAINVI GDISDDNTGI MTPVSISRSP TMKRTSSNRF
101: RQFSQELKAE AVAKAKQLSQ ELKRFSWSRS FSGNLTTTST AANQSGGAGG GLVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKQ KNVDGWNDVQ
201: SNFEKFEKNG YIYRSDFAQC IGMKDSKEFA LELFDALSRR RRLKVEKINH DELYEYWSQI NDESFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLSASAN
301: KLSRLKEQAE EYAALIMEEL DPERLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRGKSRI HRMSSDFVYI MQENWKRIWV LSLWIMIMIG
401: LFLWKFFQYK QKDAFHVMGY CLLTAKGAAE TLKFNMALIL FPVCRNTITW LRSTRLSYFV PFDDNINFHK TIAGAIVVAV ILHIGDHLAC DFPRIVRATE
501: YDYNRYLFHY FQTKQPTYFD LVKGPEGITG ILMVILMIIS FTLATRWFRR NLVKLPKPFD RLTGFNAFWY SHHLFVIVYI LLILHGIFLY FAKPWYVRTT
601: WMYLAVPVLL YGGERTLRYF RSGSYSVRLL KVAIYPGNVL TLQMSKPTQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPE DDYISIHIRQ LGDWTQELKR
701: VFSEVCEPPV GGKSGLLRAD ETTKKSLPKL LIDGPYGAPA QDYRKYDVLL LVGLGIGATP FISILKDLLN NIVKMEEHAD SISDFSRSSE YSTGSNGDTP
801: RRKRILKTTN AYFYWVTREQ GSFDWFKGVM NEVAELDQRG VIEMHNYLTS VYEEGDARSA LITMVQALNH AKNGVDIVSG TRVRTHFARP NWKKVLTKLS
901: SKHCNARIGV FYCGVPVLGK ELSKLCNTFN QKGSTKFEFH KEHF

Arabidopsis Description

RBOHFRespiratory burst oxidase homolog protein F [Source:UniProtKB/Swiss-Prot;Acc:O48538]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.