Factsheet for HORVU3Hr1G069690.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G026300.12

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64060.1	HORVU4Hr1G026300.12	AT5G21326.1	23162070

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0734200-00	Rice	mitochondrion, nucleus	92.56	35.33
HORVU3Hr1G069780.1	Barley	mitochondrion	100.0	12.91
HORVU3Hr1G037600.3	Barley	cytosol, peroxisome, plastid	47.11	12.42
HORVU1Hr1G081950.8	Barley	plastid	78.51	9.77
KRH41250	Soybean	cytosol	73.55	9.46
Solyc08g081690.2.1	Tomato	cytosol	74.38	9.35
VIT_02s0025g00510.t01	Wine grape	cytosol	72.73	9.33
KRH59983	Soybean	cytosol, nucleus, plasma membrane	71.9	9.25
KRH77593	Soybean	cytosol	70.25	9.17
KRH27880	Soybean	cytosol	68.59	8.95
HORVU0Hr1G013380.4	Barley	plastid	57.02	8.78
CDY38202	Canola	mitochondrion	67.77	8.7
CDY08347	Canola	mitochondrion	67.77	8.69
Bra027764.1-P	Field mustard	mitochondrion	67.77	8.65
AT1G64060.1	Thale cress	cytosol	66.12	8.47
HORVU6Hr1G035970.2	Barley	mitochondrion	59.5	7.51
HORVU5Hr1G062490.8	Barley	plasma membrane	59.5	7.29
HORVU5Hr1G078630.1	Barley	cytosol	57.02	7.15
HORVU3Hr1G087210.4	Barley	peroxisome, plastid	49.59	6.93
HORVU4Hr1G081670.1	Barley	cytosol	55.37	6.86
HORVU5Hr1G024550.3	Barley	cytosol	47.93	6.75
HORVU1Hr1G072160.5	Barley	cytosol	52.07	6.74
HORVU4Hr1G086500.1	Barley	cytosol	46.28	6.63
HORVU1Hr1G072140.1	Barley	cytosol	48.76	6.35
HORVU1Hr1G071340.13	Barley	mitochondrion, peroxisome, plastid	48.76	5.84
HORVU2Hr1G077650.1	Barley	peroxisome, plastid	4.13	0.67
HORVU2Hr1G094150.3	Barley	golgi, plasma membrane	0.0	0.0
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	0.0	0.0
PGSC0003DMT400032088	Potato	cytosol, nucleus, peroxisome	0.0	0.0

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	UniProt:A0A287LIR6	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:HORVU3Hr1G069690	EnsemblPlants:HORVU3Hr1G069690.1
InterPro:IPR002048	InterPro:NADPH_Ox	PFAM:PF08414	PFscan:PS50222	PANTHER:PTHR11972	PANTHER:PTHR11972:SF66
SUPFAM:SSF47473	UniParc:UPI000B46ACB8	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:528492130..528492652

Molecular Weight (calculated)

14042.4 Da

IEP (calculated)

6.538

GRAVY (calculated)

-0.742

Length

121 amino acids

Sequence
(BLAST)

001: AQLDRTRSGA HRALRGLRFI SSNKASNAWR EVQANFDRLA RDGHLSRSDF AECIGMTESK EFALELFDTL SRRRQMKLDT ISKEELREIW QQITDNSFDS
101: RLQIFFDMVD KNADGRIGEA E

Best Arabidopsis Sequence Match ( AT1G64060.1 )
(BLAST)

001: MKPFSKNDRR RWSFDSVSAG KTAVGSASTS PGTEYSINGD QEFVEVTIDL QDDDTIVLRS VEPATAINVI GDISDDNTGI MTPVSISRSP TMKRTSSNRF
101: RQFSQELKAE AVAKAKQLSQ ELKRFSWSRS FSGNLTTTST AANQSGGAGG GLVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKQ KNVDGWNDVQ
201: SNFEKFEKNG YIYRSDFAQC IGMKDSKEFA LELFDALSRR RRLKVEKINH DELYEYWSQI NDESFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLSASAN
301: KLSRLKEQAE EYAALIMEEL DPERLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRGKSRI HRMSSDFVYI MQENWKRIWV LSLWIMIMIG
401: LFLWKFFQYK QKDAFHVMGY CLLTAKGAAE TLKFNMALIL FPVCRNTITW LRSTRLSYFV PFDDNINFHK TIAGAIVVAV ILHIGDHLAC DFPRIVRATE
501: YDYNRYLFHY FQTKQPTYFD LVKGPEGITG ILMVILMIIS FTLATRWFRR NLVKLPKPFD RLTGFNAFWY SHHLFVIVYI LLILHGIFLY FAKPWYVRTT
601: WMYLAVPVLL YGGERTLRYF RSGSYSVRLL KVAIYPGNVL TLQMSKPTQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPE DDYISIHIRQ LGDWTQELKR
701: VFSEVCEPPV GGKSGLLRAD ETTKKSLPKL LIDGPYGAPA QDYRKYDVLL LVGLGIGATP FISILKDLLN NIVKMEEHAD SISDFSRSSE YSTGSNGDTP
801: RRKRILKTTN AYFYWVTREQ GSFDWFKGVM NEVAELDQRG VIEMHNYLTS VYEEGDARSA LITMVQALNH AKNGVDIVSG TRVRTHFARP NWKKVLTKLS
901: SKHCNARIGV FYCGVPVLGK ELSKLCNTFN QKGSTKFEFH KEHF

Arabidopsis Description

RBOHFRespiratory burst oxidase homolog protein F [Source:UniProtKB/Swiss-Prot;Acc:O48538]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.