Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- plasma membrane 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra027764.1-P | Field mustard | mitochondrion | 97.35 | 96.84 |
CDY08347 | Canola | mitochondrion | 95.86 | 95.76 |
AT1G64060.1 | Thale cress | cytosol | 90.46 | 90.36 |
PGSC0003DMT400032088 | Potato | cytosol, nucleus, peroxisome | 14.85 | 78.21 |
VIT_02s0025g00510.t01 | Wine grape | cytosol | 75.5 | 75.5 |
KRH41250 | Soybean | cytosol | 74.55 | 74.71 |
KRH59983 | Soybean | cytosol, nucleus, plasma membrane | 74.34 | 74.5 |
KRH27880 | Soybean | cytosol | 73.06 | 74.33 |
KRH77593 | Soybean | cytosol | 72.96 | 74.22 |
Solyc08g081690.2.1 | Tomato | cytosol | 75.72 | 74.14 |
GSMUA_Achr9P05450_001 | Banana | mitochondrion | 64.79 | 70.15 |
GSMUA_Achr6P31850_001 | Banana | mitochondrion | 65.75 | 69.51 |
HORVU3Hr1G069690.1 | Barley | mitochondrion | 8.7 | 67.77 |
EES01429 | Sorghum | mitochondrion | 67.13 | 67.06 |
Zm00001d043543_P002 | Maize | mitochondrion | 66.91 | 66.91 |
Zm00001d038762_P001 | Maize | plastid | 66.7 | 66.35 |
TraesCS3B01G314000.2 | Wheat | mitochondrion | 66.28 | 66.21 |
TraesCS3D01G279900.1 | Wheat | mitochondrion | 66.17 | 65.96 |
KXG22389 | Sorghum | mitochondrion | 66.6 | 65.62 |
TraesCS1A01G347700.1 | Wheat | mitochondrion | 65.11 | 63.89 |
TraesCS3A01G280200.1 | Wheat | mitochondrion | 66.07 | 63.83 |
TraesCS1D01G350600.1 | Wheat | mitochondrion | 65.32 | 63.64 |
TraesCS1B01G362200.1 | Wheat | mitochondrion | 65.32 | 63.37 |
CDY65632 | Canola | nucleus, peroxisome | 9.54 | 62.5 |
CDY22644 | Canola | plasma membrane | 37.01 | 60.59 |
CDY25278 | Canola | cytosol, peroxisome, plasma membrane | 53.45 | 54.02 |
CDY63433 | Canola | cytosol | 54.19 | 53.96 |
CDX86059 | Canola | peroxisome, plasma membrane, plastid | 22.16 | 53.45 |
Os01t0734200-00 | Rice | mitochondrion, nucleus | 17.92 | 53.31 |
CDY06348 | Canola | cytosol | 44.54 | 51.47 |
CDY35764 | Canola | cytosol, nucleus, plasma membrane | 48.99 | 51.39 |
CDY45918 | Canola | cytosol, nucleus, plasma membrane, plastid | 49.63 | 50.81 |
CDX85316 | Canola | cytosol, nucleus, plasma membrane | 49.2 | 50.33 |
CDX86335 | Canola | cytosol, nucleus, plasma membrane | 49.1 | 50.22 |
CDY32647 | Canola | cytosol, peroxisome, plasma membrane | 48.14 | 49.89 |
CDY38845 | Canola | cytosol, peroxisome, plasma membrane | 48.14 | 49.89 |
CDY21676 | Canola | cytosol, peroxisome, plasma membrane, plastid | 49.2 | 49.68 |
CDX81920 | Canola | cytosol, nucleus, plasma membrane, plastid | 48.78 | 49.25 |
CDX92674 | Canola | mitochondrion | 18.13 | 49.14 |
CDX92671 | Canola | cytosol | 39.34 | 49.07 |
CDX70035 | Canola | cytosol | 44.75 | 47.63 |
CDY11053 | Canola | cytosol, nucleus, plasma membrane | 41.78 | 47.3 |
CDY26109 | Canola | mitochondrion | 29.37 | 46.95 |
CDY08237 | Canola | cytosol, peroxisome, plasma membrane | 26.41 | 46.8 |
CDX98976 | Canola | cytosol | 44.86 | 46.59 |
CDX81049 | Canola | cytosol | 42.31 | 46.56 |
CDX78290 | Canola | cytosol | 41.99 | 46.37 |
CDX81047 | Canola | cytosol | 41.46 | 45.89 |
CDY41031 | Canola | cytosol, peroxisome, plasma membrane | 49.42 | 45.82 |
CDY09233 | Canola | cytosol | 42.63 | 45.48 |
CDY11054 | Canola | cytosol, nucleus, plasma membrane | 39.24 | 45.34 |
CDY26689 | Canola | cytosol, peroxisome, plasma membrane | 47.93 | 44.44 |
CDX99140 | Canola | cytosol, peroxisome, plasma membrane | 35.31 | 39.45 |
CDX92675 | Canola | cytosol | 16.12 | 39.38 |
CDY22645 | Canola | cytosol | 7.21 | 30.09 |
CDY34341 | Canola | nucleus | 7.74 | 28.19 |
CDX86058 | Canola | cytosol | 9.97 | 27.17 |
CDY70539 | Canola | nucleus | 8.27 | 25.49 |
CDX68510 | Canola | extracellular, mitochondrion, plasma membrane, plastid | 2.86 | 21.26 |
CDX88061 | Canola | plasma membrane | 14.0 | 19.94 |
CDY38013 | Canola | golgi, plasma membrane | 10.29 | 19.68 |
CDY69826 | Canola | cytosol, plastid, vacuole | 7.42 | 19.61 |
CDY46972 | Canola | plasma membrane, vacuole | 14.32 | 19.34 |
CDY44266 | Canola | plasma membrane, vacuole | 14.21 | 19.2 |
CDY12264 | Canola | plasma membrane | 14.1 | 18.84 |
CDY22585 | Canola | plasma membrane | 14.42 | 18.76 |
CDY07230 | Canola | plasma membrane | 14.0 | 18.59 |
CDX90043 | Canola | golgi, plasma membrane | 11.24 | 18.24 |
CDY38014 | Canola | plasma membrane | 12.73 | 17.02 |
CDY65711 | Canola | plasma membrane | 13.15 | 16.76 |
CDX71600 | Canola | plasma membrane | 13.15 | 16.73 |
CDY68445 | Canola | plastid | 9.01 | 16.1 |
CDY38012 | Canola | plasma membrane | 3.39 | 10.56 |
Protein Annotations
KEGG:00480+1.11.1.- | Gene3D:1.10.238.10 | MapMan:10.1.1 | Gene3D:2.40.30.10 | GO:A0A078HK12 | UniProt:A0A078HK12 |
EnsemblPlants:CDY38202 | ProteinID:CDY38202 | ProteinID:CDY38202.1 | ncoils:Coil | InterPro:Cyt_b245_heavy_chain | InterPro:EF-hand-dom_pair |
InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:FAD-bd_8 | InterPro:Fd_Rdtase_FAD-bd | InterPro:Fe3_Rdtase_TM_dom | InterPro:Fe_red_NAD-bd_6 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 |
GO:GO:0050664 | GO:GO:0055114 | GO:GO:0098869 | EnsemblPlantsGene:GSBRNA2T00065523001 | InterPro:IPR002048 | InterPro:IPR017927 |
InterPro:NADPH_Ox | PFAM:PF01794 | PFAM:PF08022 | PFAM:PF08030 | PFAM:PF08414 | PRINTS:PR00466 |
ScanProsite:PS00018 | PFscan:PS50222 | PFscan:PS51384 | PANTHER:PTHR11972 | PANTHER:PTHR11972:SF66 | InterPro:Riboflavin_synthase-like_b-brl |
SUPFAM:SSF47473 | SUPFAM:SSF52343 | SUPFAM:SSF63380 | TMHMM:TMhelix | UniParc:UPI0004EE5205 | SEG:seg |
Description
BnaA09g11870DBnaA09g11870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HK12]
Coordinates
chrLK032418:-:168157..174250
Molecular Weight (calculated)
108057.0 Da
IEP (calculated)
9.641
GRAVY (calculated)
-0.248
Length
943 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPFSKNDRR RWSFDSVSAG KLAVGSASTS PGTECSNGGY GEEFVEVTID LQDDDTIVLR SVEPATSINI DISDETAGGG AGGGIMTPAS ISRSPTMKRT
101: SSNRLRQFSQ ELKAEAVAKA KQLSHELKRF SWSRSFSGTL TSANQNGGGG GIVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKN KNVEGWNDVQ
201: TNFEKLAKNG YIYRSDFAQC IGMKDSKEFA LELYDALSRR RRLKVEKISH DELYEYWLQI NDDSFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLTIKIE
301: RMRIEFSCHH MFCRIEFKFI TYHCLWQLET LLLQKDTYLN YSQALSYTSQ ALSQNLQGLR KNSRIHRMSS DFVYFMQENW KRIWVLSLWI MIMIGLFLWK
401: FFQYKQKDAF HVMGYCLLTA KGAAETLKFN MALILFPVCR NTITWLRSTR LSYFIPFDDN INFHKTIAGA ILVAVILHVG DHIACDFPRI VRATEYDYNR
501: YLFHYFQHKQ PTYFDLVKGP EGITGILMII LMAISFTLAT RWFRRNLVKL PKPFDRLTGF NAFWYSHHLF IIVYVLLVLH GIFLYFAKPW YVHTTWMYLA
601: VPVLLYGGER TLRYFRSGSY SVRLLKVAIY PGNVLTLQMS KPSQFRYKSG QYMFVQCPAV SPFEWHPFSI TSAPGDDYLS IHIRQLGDWT QELKRVFSEV
701: CEPPVAGKSG LLRADETTKK SLPKLLIDGP YGAPAQDYRK YDVLLLVGLG IGATPFISIL KDLLNNIVKM EEQADSISDF SRSSENSTGS NSGNNANTPR
801: GKKILKTTNA YFYWVTREQG SFDWFKGVMN EVAELDQRGV IEMHNYLTSV YEEGDARSAL ITMVQALNHA KNGVDIVSGT SVRTHFARPN WKKVLSKLSS
901: KHCNARIGVF YCGVPVLGKE LSKLCNTFNQ KGSTKFEFHK EHF
101: SSNRLRQFSQ ELKAEAVAKA KQLSHELKRF SWSRSFSGTL TSANQNGGGG GIVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKN KNVEGWNDVQ
201: TNFEKLAKNG YIYRSDFAQC IGMKDSKEFA LELYDALSRR RRLKVEKISH DELYEYWLQI NDDSFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLTIKIE
301: RMRIEFSCHH MFCRIEFKFI TYHCLWQLET LLLQKDTYLN YSQALSYTSQ ALSQNLQGLR KNSRIHRMSS DFVYFMQENW KRIWVLSLWI MIMIGLFLWK
401: FFQYKQKDAF HVMGYCLLTA KGAAETLKFN MALILFPVCR NTITWLRSTR LSYFIPFDDN INFHKTIAGA ILVAVILHVG DHIACDFPRI VRATEYDYNR
501: YLFHYFQHKQ PTYFDLVKGP EGITGILMII LMAISFTLAT RWFRRNLVKL PKPFDRLTGF NAFWYSHHLF IIVYVLLVLH GIFLYFAKPW YVHTTWMYLA
601: VPVLLYGGER TLRYFRSGSY SVRLLKVAIY PGNVLTLQMS KPSQFRYKSG QYMFVQCPAV SPFEWHPFSI TSAPGDDYLS IHIRQLGDWT QELKRVFSEV
701: CEPPVAGKSG LLRADETTKK SLPKLLIDGP YGAPAQDYRK YDVLLLVGLG IGATPFISIL KDLLNNIVKM EEQADSISDF SRSSENSTGS NSGNNANTPR
801: GKKILKTTNA YFYWVTREQG SFDWFKGVMN EVAELDQRGV IEMHNYLTSV YEEGDARSAL ITMVQALNHA KNGVDIVSGT SVRTHFARPN WKKVLSKLSS
901: KHCNARIGVF YCGVPVLGKE LSKLCNTFNQ KGSTKFEFHK EHF
001: MKPFSKNDRR RWSFDSVSAG KTAVGSASTS PGTEYSINGD QEFVEVTIDL QDDDTIVLRS VEPATAINVI GDISDDNTGI MTPVSISRSP TMKRTSSNRF
101: RQFSQELKAE AVAKAKQLSQ ELKRFSWSRS FSGNLTTTST AANQSGGAGG GLVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKQ KNVDGWNDVQ
201: SNFEKFEKNG YIYRSDFAQC IGMKDSKEFA LELFDALSRR RRLKVEKINH DELYEYWSQI NDESFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLSASAN
301: KLSRLKEQAE EYAALIMEEL DPERLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRGKSRI HRMSSDFVYI MQENWKRIWV LSLWIMIMIG
401: LFLWKFFQYK QKDAFHVMGY CLLTAKGAAE TLKFNMALIL FPVCRNTITW LRSTRLSYFV PFDDNINFHK TIAGAIVVAV ILHIGDHLAC DFPRIVRATE
501: YDYNRYLFHY FQTKQPTYFD LVKGPEGITG ILMVILMIIS FTLATRWFRR NLVKLPKPFD RLTGFNAFWY SHHLFVIVYI LLILHGIFLY FAKPWYVRTT
601: WMYLAVPVLL YGGERTLRYF RSGSYSVRLL KVAIYPGNVL TLQMSKPTQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPE DDYISIHIRQ LGDWTQELKR
701: VFSEVCEPPV GGKSGLLRAD ETTKKSLPKL LIDGPYGAPA QDYRKYDVLL LVGLGIGATP FISILKDLLN NIVKMEEHAD SISDFSRSSE YSTGSNGDTP
801: RRKRILKTTN AYFYWVTREQ GSFDWFKGVM NEVAELDQRG VIEMHNYLTS VYEEGDARSA LITMVQALNH AKNGVDIVSG TRVRTHFARP NWKKVLTKLS
901: SKHCNARIGV FYCGVPVLGK ELSKLCNTFN QKGSTKFEFH KEHF
101: RQFSQELKAE AVAKAKQLSQ ELKRFSWSRS FSGNLTTTST AANQSGGAGG GLVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKQ KNVDGWNDVQ
201: SNFEKFEKNG YIYRSDFAQC IGMKDSKEFA LELFDALSRR RRLKVEKINH DELYEYWSQI NDESFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLSASAN
301: KLSRLKEQAE EYAALIMEEL DPERLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRGKSRI HRMSSDFVYI MQENWKRIWV LSLWIMIMIG
401: LFLWKFFQYK QKDAFHVMGY CLLTAKGAAE TLKFNMALIL FPVCRNTITW LRSTRLSYFV PFDDNINFHK TIAGAIVVAV ILHIGDHLAC DFPRIVRATE
501: YDYNRYLFHY FQTKQPTYFD LVKGPEGITG ILMVILMIIS FTLATRWFRR NLVKLPKPFD RLTGFNAFWY SHHLFVIVYI LLILHGIFLY FAKPWYVRTT
601: WMYLAVPVLL YGGERTLRYF RSGSYSVRLL KVAIYPGNVL TLQMSKPTQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPE DDYISIHIRQ LGDWTQELKR
701: VFSEVCEPPV GGKSGLLRAD ETTKKSLPKL LIDGPYGAPA QDYRKYDVLL LVGLGIGATP FISILKDLLN NIVKMEEHAD SISDFSRSSE YSTGSNGDTP
801: RRKRILKTTN AYFYWVTREQ GSFDWFKGVM NEVAELDQRG VIEMHNYLTS VYEEGDARSA LITMVQALNH AKNGVDIVSG TRVRTHFARP NWKKVLTKLS
901: SKHCNARIGV FYCGVPVLGK ELSKLCNTFN QKGSTKFEFH KEHF
Arabidopsis Description
RBOHFRespiratory burst oxidase homolog protein F [Source:UniProtKB/Swiss-Prot;Acc:O48538]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.