CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011911.1-P	Field mustard	cytosol	98.12	81.06
CDY26109	Canola	mitochondrion	88.72	80.0
CDY65632	Canola	nucleus, peroxisome	14.85	54.86
CDX92674	Canola	mitochondrion	29.32	44.83
CDX92671	Canola	cytosol	59.02	41.53
CDX86059	Canola	peroxisome, plasma membrane, plastid	29.14	39.64
CDY11053	Canola	cytosol, nucleus, plasma membrane	59.21	37.82
CDY38845	Canola	cytosol, peroxisome, plasma membrane	62.41	36.48
CDY32647	Canola	cytosol, peroxisome, plasma membrane	62.41	36.48
CDY22644	Canola	plasma membrane	35.9	33.16
CDY11054	Canola	cytosol, nucleus, plasma membrane	50.75	33.09
KRH41026	Soybean	mitochondrion	53.38	31.98
VIT_19s0014g02830.t01	Wine grape	cytosol	50.38	31.9
KRH59706	Soybean	cytosol	53.38	31.63
CDY06348	Canola	cytosol	48.5	31.62
CDY35764	Canola	cytosol, nucleus, plasma membrane	53.01	31.37
CDX81049	Canola	cytosol	50.0	31.04
CDX70035	Canola	cytosol	51.69	31.04
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	53.38	30.84
KRH63901	Soybean	cytosol, nucleus, plasma membrane	53.76	30.82
KRH54051	Soybean	cytosol, nucleus, plasma membrane	53.95	30.5
CDX86335	Canola	cytosol, nucleus, plasma membrane	52.63	30.37
CDX85316	Canola	cytosol, nucleus, plasma membrane	52.63	30.37
CDX98976	Canola	cytosol	51.32	30.07
CDX78290	Canola	cytosol	47.93	29.86
CDX81047	Canola	cytosol	46.8	29.23
CDY08347	Canola	mitochondrion	49.62	27.97
CDY38202	Canola	mitochondrion	46.8	26.41
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	45.86	26.12
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	45.49	25.91
CDY63433	Canola	cytosol	45.3	25.45
CDX99140	Canola	cytosol, peroxisome, plasma membrane	40.23	25.36
CDY09233	Canola	cytosol	41.92	25.23
CDY25278	Canola	cytosol, peroxisome, plasma membrane	43.98	25.08
CDY41031	Canola	cytosol, peroxisome, plasma membrane	46.8	24.48
CDX92675	Canola	cytosol	17.29	23.83
CDY26689	Canola	cytosol, peroxisome, plasma membrane	43.42	22.71
CDY34341	Canola	nucleus	10.71	22.01
CDY70539	Canola	nucleus	12.03	20.91
CDX86058	Canola	cytosol	12.22	18.79
CDY69826	Canola	cytosol, plastid, vacuole	11.47	17.09
CDY38013	Canola	golgi, plasma membrane	14.1	15.21
CDX90043	Canola	golgi, plasma membrane	15.23	13.94
CDY07230	Canola	plasma membrane	15.79	11.83
CDX88061	Canola	plasma membrane	14.29	11.48
CDY38014	Canola	plasma membrane	15.04	11.35
CDY12264	Canola	plasma membrane	15.04	11.33
CDY46972	Canola	plasma membrane, vacuole	14.85	11.32
CDY44266	Canola	plasma membrane, vacuole	14.85	11.32
CDY22645	Canola	cytosol	4.7	11.06
CDY22585	Canola	plasma membrane	14.85	10.9
CDY68445	Canola	plastid	10.34	10.42
CDY65711	Canola	plasma membrane	14.1	10.14
CDX71600	Canola	plasma membrane	14.1	10.12
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	2.07	8.66
CDY38012	Canola	plasma membrane	2.63	4.62

Protein Annotations

KEGG:00480+1.11.1.-	Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	GO:A0A078F547
UniProt:A0A078F547	EnsemblPlants:CDY08237	ProteinID:CDY08237	ProteinID:CDY08237.1	InterPro:EF-hand-dom_pair	InterPro:FAD-bd_8
InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSBRNA2T00125560001	InterPro:IPR017927	InterPro:NADPH_Ox
PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	UniParc:UPI0004EE5525	SEG:seg

Description

BnaA05g13820DBnaA05g13820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F547]

Coordinates

chrLK031984:+:278252..281866

Molecular Weight (calculated)

61252.4 Da

IEP (calculated)

6.400

GRAVY (calculated)

-0.310

Length

532 amino acids

Sequence
(BLAST)

001: MERERALISR PLVVDCCQGM DSIDFALELF DALARRRLMT LDTIDGDQLR EFWEQISAQS FDSRLQTFFD MLRLLIFIHF ELLIDSDANG RLTEDQVRQI
101: INLSSSTNNL PNIQKRTDEY AAMIMEELDP DNIGYIMIES LETLLSYAET QHIRRDSEGS KKLSHMLSLK LNTTRDPKPL KVWYSGLRHF VSDSLQMTSM
201: YLAVPVAFPA CEILIRPFRS SVSTVTIRKV AIYPGNVLTL HLSRPKNFKY ESGQYMFVTC PTISTFEWHP FSITSAPQDE DLSIHIKVAG DWTNALKERQ
301: ISLSSMLGIC IREMNPYSFP KIMIDGPYDA SAQNYKKYNV VLLVGLGIGT APMMSIIKDI INNVEAKEHS QINQMEKGTQ RHQQGEKESM KTRKAYFYWV
401: TKDQGSYSWF QNIMNEVTER DTNGVVEVNN YCTSIYEEGD VRSVFIRMLQ SLNHSKNGVD IVSGTRVMTH FAKPNWKNVY KQIAIDHYGS NVGVFYCGEV
501: SLAEELRQLA LEFTHKTETR FSFHKENFYP PC

Best Arabidopsis Sequence Match ( AT4G25090.1 )
(BLAST)

001: MQRVSFEVKD TEAEKSSSEI LSGSLPSTYR NPAMENVGNA VDDGSSVKNN PKLDMQKQNG LVKWFKKCLT MVSGESKAPR LDRSKSTAGQ ALKGLKIISK
101: TDGNAAWTVV EKRYLKITAN TDGLLLRSKF GECIGMNSKE FALELFDALA RKSHLKGDVI TETELKKFWE QINDKSFDSR LITFFDLMDK DSDGRLTEDE
201: VREIIKLSSS ANHLSCIQNK ADEYAAMIME ELDPDHMGYI MMESLKKLLL QAETKSVSTD INSEERKELS DMLTESLKPT RDPNHLRRWY CQLRFFVLDS
301: WQRVWVIALW LTIMAILFAY KYIQYKNRAV YEVLGPCVCL AKGAAETLKL NMALILLPVC RNTITWLRNK TRLGVFVPFD DNLNFHKVIA VGIAIGVAIH
401: SVSHLACDFP LLIAATPAEY MPLGKFFGEE QPKRYLHFVK STEGITGLVM VFLMVIAFTL AMPWFRRGKL EKKLPGPLKK LASFNAFWYT HHLFVIVYIL
501: LVLHGYYIYL NKEWYKKTTW MYLAVPVALY AYERLIRAFR SSIRTVKVLK MAAYPGKVLT LQMSKPTNFK YMSGQYMFVN CPAVSPFEWH PFSITSTPQD
601: DYLSVHIKAL GDWTEAIQGV FSEVSKPPPV GDMLNGANSP RFPKIMIDGP YGAPAQDYKK YEVVLLIGLG IGATPMISII KDIINNTETK EQLSQMEKGS
701: PQEQQGNKET FKTRRAYFYW VTKEQGTFDW FKNIMNEIAE RDKSKVIELH NHCTSVYEEG DVRSALIRML QSLNYAKNGL DIVAGTRVMS HFARPNWKNV
801: YKQIAMDHPG ANVGVFYCGA PVLTKELRQL ALEFTHKTST RFSFHKENF

Arabidopsis Description

RBOHGPutative respiratory burst oxidase homolog protein G [Source:UniProtKB/Swiss-Prot;Acc:Q9SW17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.