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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY41031 Canola cytosol, peroxisome, plasma membrane 91.45 91.45
CDY21676 Canola cytosol, peroxisome, plasma membrane, plastid 82.4 89.72
CDX81920 Canola cytosol, nucleus, plasma membrane, plastid 80.92 88.12
Bra025721.1-P Field mustard cytosol, nucleus, peroxisome 88.3 86.76
AT1G19230.2 Thale cress cytosol, peroxisome, plasma membrane 80.33 85.82
Solyc05g025680.1.1 Tomato plasma membrane 42.08 68.59
VIT_11s0016g00540.t01 Wine grape cytosol, peroxisome, plastid 58.41 64.78
PGSC0003DMT400066027 Potato peroxisome 28.91 64.19
Solyc07g042460.1.1 Tomato cytosol 55.46 64.02
PGSC0003DMT400035268 Potato mitochondrion 58.31 63.09
KRH37549 Soybean cytosol 55.85 61.21
KRH12608 Soybean cytosol 55.95 60.79
GSMUA_Achr3P05840_001 Banana mitochondrion 51.92 59.33
GSMUA_Achr8P23680_001 Banana mitochondrion 51.92 59.26
CDY65632 Canola nucleus, peroxisome 7.96 56.25
TraesCS5B01G212100.1 Wheat mitochondrion 54.47 56.24
TraesCS5D01G222100.1 Wheat mitochondrion 54.38 55.63
TraesCS5A01G211800.1 Wheat cytosol, mitochondrion, peroxisome, plasma membrane 54.08 55.61
HORVU5Hr1G062490.8 Barley plasma membrane 53.88 55.52
Os09t0438000-01 Rice mitochondrion 54.77 55.31
KXG35704 Sorghum mitochondrion 54.67 55.21
Zm00001d032079_P001 Maize mitochondrion 52.31 54.51
TraesCS6D01G164500.1 Wheat mitochondrion, plasma membrane 50.74 54.32
TraesCS6A01G180600.1 Wheat mitochondrion 50.93 54.18
TraesCS6B01G205000.1 Wheat mitochondrion 50.93 54.13
CDY22644 Canola plasma membrane 30.58 53.99
KXG25273 Sorghum mitochondrion 53.1 53.57
HORVU6Hr1G035970.2 Barley mitochondrion 48.67 51.62
CDY08347 Canola mitochondrion 47.1 50.74
CDX92671 Canola cytosol 35.79 48.15
CDY38202 Canola mitochondrion 44.44 47.93
Zm00001d020609_P001 Maize mitochondrion 32.65 46.83
CDY06348 Canola cytosol 37.17 46.32
CDX86059 Canola peroxisome, plasma membrane, plastid 17.8 46.29
CDY11053 Canola cytosol, nucleus, plasma membrane 37.76 46.1
CDY35764 Canola cytosol, nucleus, plasma membrane 40.51 45.83
CDX92674 Canola mitochondrion 15.63 45.69
CDX81047 Canola cytosol 38.25 45.66
CDY45918 Canola cytosol, nucleus, plasma membrane, plastid 40.9 45.17
CDY32647 Canola cytosol, peroxisome, plasma membrane 40.41 45.16
CDY38845 Canola cytosol, peroxisome, plasma membrane 40.41 45.16
CDX85316 Canola cytosol, nucleus, plasma membrane 40.9 45.12
CDX78290 Canola cytosol 37.86 45.08
CDX86335 Canola cytosol, nucleus, plasma membrane 40.81 45.01
CDX81049 Canola cytosol 37.86 44.92
CDX70035 Canola cytosol 39.04 44.81
CDY25278 Canola cytosol, peroxisome, plasma membrane 40.71 44.37
CDY63433 Canola cytosol 41.3 44.35
CDY11054 Canola cytosol, nucleus, plasma membrane 35.5 44.24
CDX98976 Canola cytosol 39.23 43.94
Os08t0453700-00 Rice plastid 40.81 43.68
CDX92675 Canola cytosol 16.52 43.52
CDY08237 Canola cytosol, peroxisome, plasma membrane 22.71 43.42
CDY26109 Canola mitochondrion 24.98 43.05
Solyc05g025690.1.1 Tomato mitochondrion 9.83 41.32
CDY09233 Canola cytosol 35.0 40.27
CDX99140 Canola cytosol, peroxisome, plasma membrane 30.88 37.2
CDX86058 Canola cytosol 10.52 30.92
CDY70539 Canola nucleus 9.24 30.72
CDY34341 Canola nucleus 7.47 29.34
CDY22645 Canola cytosol 6.1 27.43
CDY44266 Canola plasma membrane, vacuole 13.77 20.06
CDX88061 Canola plasma membrane 12.98 19.94
CDY46972 Canola plasma membrane, vacuole 13.57 19.77
CDY69826 Canola cytosol, plastid, vacuole 6.49 18.49
CDY38013 Canola golgi, plasma membrane 8.95 18.46
CDX90043 Canola golgi, plasma membrane 10.52 18.42
CDX68510 Canola extracellular, mitochondrion, plasma membrane, plastid 2.26 18.11
CDY22585 Canola plasma membrane 12.68 17.79
CDY07230 Canola plasma membrane 12.39 17.75
CDY38014 Canola plasma membrane 12.29 17.73
CDY12264 Canola plasma membrane 12.19 17.56
CDY65711 Canola plasma membrane 12.09 16.62
CDX71600 Canola plasma membrane 12.09 16.6
CDY38012 Canola plasma membrane 4.52 15.18
CDY68445 Canola plastid 7.57 14.58
Protein Annotations
KEGG:00480+1.11.1.-Gene3D:1.10.238.10MapMan:10.1.1Gene3D:2.40.30.10Gene3D:3.40.50.80GO:A0A078GN75
UniProt:A0A078GN75EnsemblPlants:CDY26689ProteinID:CDY26689ProteinID:CDY26689.1ncoils:CoilInterPro:Cyt_b245_heavy_chain
InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:FAD-bd_8InterPro:Fd_Rdtase_FAD-bdInterPro:Fe3_Rdtase_TM_domInterPro:Fe_red_NAD-bd_6
GO:GO:0003674GO:GO:0003824GO:GO:0004601GO:GO:0005575GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0050664GO:GO:0055114
GO:GO:0098869EnsemblPlantsGene:GSBRNA2T00035584001InterPro:IPR017927InterPro:NADPH_OxPFAM:PF01794PFAM:PF08022
PFAM:PF08030PFAM:PF08414PRINTS:PR00466ScanProsite:PS00018PFscan:PS51384PANTHER:PTHR11972
PANTHER:PTHR11972:SF44InterPro:Riboflavin_synthase-like_b-brlSUPFAM:SSF47473SUPFAM:SSF52343SUPFAM:SSF63380TMHMM:TMhelix
UniParc:UPI0004EEB4D1SEG:seg::::
Description
BnaA06g13330DBnaA06g13330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GN75]
Coordinates
chrLK032193:-:134477..140832
Molecular Weight (calculated)
115090.0 Da
IEP (calculated)
9.154
GRAVY (calculated)
-0.307
Length
1017 amino acids
Sequence
(BLAST)
0001: MKLSPLSFST QSSFSHGGDG YDDGVELRPS PSTGGAMLPV FLNGLTRDGD SGSGSSWERE LVEVTLELNG DDSIVVCGMS EATSDSQPRS VNVSGRLTRS
0101: LSTTPTRIRQ TFGRLLRSDS MRPTTSSVST TDTGRDVERQ GAAGTETPIM SARDRRRENA ILQRSTSSAK RALKGLQFIN KTTKGNSCDC NRDCDCDCDQ
0201: MWKKVEKRFE TLSKEGLLAR EDFGECVGMK DSKEFAVSVF DALARRRRQK LEKITRDELH DFWLQISDQS FDARLQIFFD ISRRTRSSAQ RALQGLQFIN
0301: KTTKGNSCGM KDSKEFAVSV FDALARRRRQ KLEKITKDEL HDFWADSNED GRITKEEIKE LLMLSASANK LAKLKEQAEE YASLIMEELD PENFGYIELW
0401: QLETLLLQRD TYMDYSRPLS TASVGITTPR RNLIKPRSVV LKCRRKLQCL VLDNWQRIWV LLLWFTVMAI LFVWKFLQYR DKAAFKVMGY CLTTAKGAAE
0501: TLKLNMALVL LPVCRNTLTW LRSTRARAFV PFDDNINFHK IIACAIVIGI LVHAGTHLAC DFPRIINSTP EDFALIASPF NGVKPTFKDL MTGAEGITGI
0601: SMVILTTIAF TLASTHFRRN RVSLPAPLDR LTGFNAFWYT HHLLVVVYIM LIVHGTLLFF ADKWYQKTTW MYISVPLMLY AAERSIRACR SNHYSVKILK
0701: VSMLPGEVLS IIMSKPPGFK YKSGQYIFLQ CPTISRFEWH PFSITSAPGD EQLSIHIRTQ GDWTEELQRV LTVGKDLSTC VIGRSKFSAY GNTDSSQQPK
0801: LLVDGPYGAP AQDYRSYDVL LLIGLGIGAT PFISILKDLL NNSREEQTDN EFSKSDFSWN SNTSSFTTIT PSSTQGGKKK AVKAHFYWVT REPGSVEWFR
0901: GVMEEISDMD CREQIELHNY LTSVYDEGDA RSTLIKMVQA LNHAKHGVDI LSGTRVRTHF ARPNWKEVFS SIARKHPNST VGVFYCGIPT VAKELKKQAQ
1001: EMSQKTSTRF EFHKEHF
Best Arabidopsis Sequence Match ( AT1G19230.2 )
(BLAST)
001: MKLSPLSFST SSSFSHADGI DDGVELISSP FAGGAMLPVF LNDLSRNSGE SGSGSSWERE LVEVTLELDV GDDSILVCGM SEAASVDSRA RSVDLVTARL
101: SRNLSNASTR IRQKLGKLLR SESWKTTTSS TAGERDRDLE RQTAVTLGIL TARDKRKEDA KLQRSTSSAQ RALKGLQFIN KTTRGNSCVC DWDCDCDQMW
201: KKVEKRFESL SKNGLLARDD FGECVGMVDS KDFAVSVFDA LARRRRQKLE KITKDELHDF WLQISDQSFD ARLQIFFDMA DSNEDGKITR EEIKELLMLS
301: ASANKLAKLK EQAEEYASLI MEELDPENFG YIELWQLETL LLQRDAYMNY SRPLSTTSGG VSTPRRNLIR PRHVVQKCRK KLQCLILDNW QRSWVLLVWV
401: MLMAILFVWK FLEYREKAAF KVMGYCLTTA KGAAETLKLN MALVLLPVCR NTLTWLRSTR ARACVPFDDN INFHKIIACA IAIGILVHAG THLACDFPRI
501: INSSPEQFVL IASAFNGTKP TFKDLMTGAE GITGISMVIL TTIAFTLAST HFRRNRVRLP APLDRLTGFN AFWYTHHLLV VVYIMLIVHG TFLFFADKWY
601: QKTTWMYISV PLVLYVAERS LRACRSKHYS VKILKVSMLP GEVLSLIMSK PPGFKYKSGQ YIFLQCPTIS RFEWHPFSIT SAPGDDQLSV HIRTLGDWTE
701: ELRRVLTVGK DLSTCVIGRS KFSAYCNIDM INRPKLLVDG PYGAPAQDYR SYDVLLLIGL GIGATPFISI LKDLLNNSRD EQTDNEFSRS DFSWNSCTSS
801: YTTATPTSTH GGKKKAVKAH FYWVTREPGS VEWFRGVMEE ISDMDCRGQI ELHNYLTSVY DEGDARSTLI KMVQALNHAK HGVDILSGTR VRTHFARPNW
901: KEVFSSIARK HPNSTVGVFY CGIQTVAKEL KKQAQDMSQK TTTRFEFHKE HF
Arabidopsis Description
RBOHERespiratory burst oxidase homolog protein E [Source:UniProtKB/Swiss-Prot;Acc:O81211]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.