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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY65632 Canola nucleus, peroxisome 17.65 100.0
Bra031658.1-P Field mustard cytosol 98.77 95.27
CDY22644 Canola plasma membrane 65.44 92.71
AT1G09090.2 Thale cress cytosol 83.33 80.66
KRH33894 Soybean cytosol 68.01 67.27
PGSC0003DMT400063688 Potato cytosol 68.38 64.36
Solyc01g099620.2.1 Tomato cytosol 67.77 63.93
KRG92895 Soybean extracellular, mitochondrion 69.49 63.78
KRH68525 Soybean cytosol 68.87 63.5
KRG96816 Soybean cytosol 68.87 63.36
VIT_14s0060g02320.t01 Wine grape cytosol 68.14 62.19
GSMUA_Achr5P26970_001 Banana cytosol, peroxisome, plasma membrane 61.89 60.55
HORVU4Hr1G086500.1 Barley cytosol 58.09 56.09
TraesCS5A01G527600.1 Wheat cytosol 57.84 55.73
TraesCS4D01G352200.3 Wheat cytosol 57.72 55.61
TraesCS4B01G358800.1 Wheat cytosol 57.72 55.61
Zm00001d009248_P002 Maize cytosol 59.44 54.07
Zm00001d040805_P003 Maize cytosol 59.56 54.06
TraesCS3B01G212900.5 Wheat cytosol 59.31 53.78
TraesCS3D01G187300.2 Wheat cytosol 59.31 53.78
TraesCS3A01G182900.1 Wheat cytosol 59.19 53.61
OQU86843 Sorghum cytosol 60.17 53.14
TraesCS5D01G105900.1 Wheat cytosol 56.25 53.06
CDY35764 Canola cytosol, nucleus, plasma membrane 58.33 52.95
Os01t0360200-01 Rice plasma membrane 58.58 52.82
TraesCS5B01G099700.1 Wheat cytosol 56.13 52.46
TraesCS5A01G093600.1 Wheat cytosol 56.0 52.11
CDY45918 Canola cytosol, nucleus, plasma membrane, plastid 58.46 51.79
Zm00001d023859_P001 Maize plastid 56.99 51.55
CDX86335 Canola cytosol, nucleus, plasma membrane 58.21 51.52
Os12t0541300-01 Rice plasma membrane 57.23 51.38
CDX92671 Canola cytosol 47.55 51.32
CDY38845 Canola cytosol, peroxisome, plasma membrane 57.23 51.32
CDY32647 Canola cytosol, peroxisome, plasma membrane 57.11 51.21
CDX85316 Canola cytosol, nucleus, plasma membrane 57.72 51.08
CDX70035 Canola cytosol 55.27 50.9
EES16102 Sorghum plastid 57.11 50.87
CDX98976 Canola cytosol 55.15 49.56
CDX92675 Canola cytosol 23.41 49.48
CDX86059 Canola peroxisome, plasma membrane, plastid 23.53 49.1
CDY11053 Canola cytosol, nucleus, plasma membrane 50.0 48.98
CDX81047 Canola cytosol 51.1 48.94
CDY26109 Canola mitochondrion 35.29 48.81
CDX81049 Canola cytosol 51.23 48.77
CDX78290 Canola cytosol 50.86 48.59
HORVU5Hr1G024550.3 Barley cytosol 51.1 48.54
CDY08237 Canola cytosol, peroxisome, plasma membrane 31.62 48.5
CDY11054 Canola cytosol, nucleus, plasma membrane 46.81 46.81
CDY08347 Canola mitochondrion 53.92 46.61
HORVU3Hr1G037600.3 Barley cytosol, peroxisome, plastid 25.86 45.97
CDY38202 Canola mitochondrion 51.47 44.54
CDX92674 Canola mitochondrion 18.14 42.53
CDY22645 Canola cytosol 11.76 42.48
CDY25278 Canola cytosol, peroxisome, plasma membrane 48.28 42.23
CDY63433 Canola cytosol 48.9 42.13
CDY21676 Canola cytosol, peroxisome, plasma membrane, plastid 48.16 42.08
CDX81920 Canola cytosol, nucleus, plasma membrane, plastid 47.55 41.54
CDY09233 Canola cytosol 43.87 40.5
CDY41031 Canola cytosol, peroxisome, plasma membrane 47.92 38.45
CDY26689 Canola cytosol, peroxisome, plasma membrane 46.32 37.17
CDX99140 Canola cytosol, peroxisome, plasma membrane 37.87 36.61
CDY34341 Canola nucleus 9.93 31.27
CDX86058 Canola cytosol 13.24 31.21
CDY70539 Canola nucleus 10.66 28.43
CDY69826 Canola cytosol, plastid, vacuole 8.21 18.77
CDX88061 Canola plasma membrane 14.34 17.67
CDY38013 Canola golgi, plasma membrane 10.66 17.65
CDY46972 Canola plasma membrane, vacuole 14.71 17.19
CDY44266 Canola plasma membrane, vacuole 14.58 17.05
CDX90043 Canola golgi, plasma membrane 12.01 16.87
CDY07230 Canola plasma membrane 14.58 16.76
CDY38014 Canola plasma membrane 14.09 16.31
CDY22585 Canola plasma membrane 14.09 15.86
CDY12264 Canola plasma membrane 13.48 15.58
CDX68510 Canola extracellular, mitochondrion, plasma membrane, plastid 2.33 14.96
CDY68445 Canola plastid 9.44 14.58
CDY65711 Canola plasma membrane 13.11 14.46
CDX71600 Canola plasma membrane 13.11 14.44
CDY38012 Canola plasma membrane 3.8 10.23
Protein Annotations
KEGG:00480+1.11.1.-Gene3D:1.10.238.10MapMan:10.1.1Gene3D:2.40.30.10Gene3D:3.40.50.80GO:A0A078F3Q5
EnsemblPlants:CDY06348ProteinID:CDY06348ProteinID:CDY06348.1InterPro:EF-hand-dom_pairInterPro:EF_hand_domInterPro:FAD-bd_8
InterPro:Fd_Rdtase_FAD-bdInterPro:Fe3_Rdtase_TM_domInterPro:Fe_red_NAD-bd_6GO:GO:0003674GO:GO:0003824GO:GO:0004601
GO:GO:0005488GO:GO:0005509GO:GO:0008150GO:GO:0008152GO:GO:0016174GO:GO:0016491
GO:GO:0050664GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00122280001InterPro:IPR002048InterPro:IPR017927InterPro:NADPH_Ox
PFAM:PF01794PFAM:PF08022PFAM:PF08030PFAM:PF08414PFscan:PS50222PFscan:PS51384
PANTHER:PTHR11972PANTHER:PTHR11972:SF57InterPro:RBOHBInterPro:Riboflavin_synthase-like_b-brlSUPFAM:SSF47473SUPFAM:SSF52343
SUPFAM:SSF63380TMHMM:TMhelixUniParc:UPI0004EF2D8FSEG:seg::
Description
BnaA09g48550D
Coordinates
chrLK031968:+:903858..908816
Molecular Weight (calculated)
93001.7 Da
IEP (calculated)
8.258
GRAVY (calculated)
-0.214
Length
816 amino acids
Sequence
(BLAST)
001: MEDKQEKMEQ EMESWSEGDI TSRCEATGSD DCEDYVEITL DTRDDSLGSL KLEKNKPMAV LRSVVSGKLK TMVKSLSLSS RRLDRCKSGA MFALRGLRFI
101: TQNDAVGRGW DEVEKRFDEL AVEGKLPKSK FGHCIGMAES SEFVNELFEA LVRRRGTTSI SKTELFDFWE QIAGDSFDAR LQIFFDMVDK DLDGRITGEE
201: VKEIIALSAS SNQLSRIQEK VDEYAALIME ELDPDNLGYI ELYNLETLLL QVPSQSDISP SSENKRALSK MLSQKLIPTK ERNPLKRFAR DIKYFFLENW
301: KRIWVLTLWI SICIALFTWK FLQYKRRAVF EVLGSCVSVA KGSAETLKFN MALILLPVCR NTITWLRTNS KLGSVVPFDD NINFHKVTAF GIAIGVGLHA
401: ISHLACDFPR LLHAKYVEYE PVKKFFGDER PDNYWWFVKG TDGWTGVTMV VLMVIAYALA QSWFRRNRAS LPKTLERGNR FHPVLTWMYL AVPTILYACE
501: RLIRLFRSGS KAVTILKVAV YPGNVLSLYM SKPKGFKYRS GQYIYVNCSD VSPFQWHPFS ITSASGDEFL SIHIRTLGDW TSQLKCLFSK VCQPPSTSQS
601: GLFTADLVQA NNITRFPRLL IDGPYGAPAQ DYRNYDVLLL VGLGIGATPL ISILKDVLNN IKNHKSIEEG TSHNVNRSNT KRAYFYWVTR EQGSLEWFSE
701: VMNEVAEYDS EGIIELHNYC TSVYEEGDAR SALITMLQSL HHAKNGIDIV SGTRVRTHFA RPDWRSVFKH VAVNHINQRV GVFYCGKSCI IGELKGLAQD
801: FSRKTSTKFE FHKENF
Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)
001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF
Arabidopsis Description
RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.