Factsheet for TraesCS3D01G187300.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G212900.5	Wheat	cytosol	99.44	99.44
TraesCS3A01G182900.1	Wheat	cytosol	98.78	98.67
HORVU3Hr1G037600.3	Barley	cytosol, peroxisome, plastid	48.67	95.42
TraesCS4D01G352200.3	Wheat	cytosol	84.67	89.96
Zm00001d009248_P002	Maize	cytosol	85.11	85.4
Zm00001d040805_P003	Maize	cytosol	85.22	85.32
Os01t0360200-01	Rice	plasma membrane	85.22	84.75
OQU86843	Sorghum	cytosol	85.78	83.55
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	62.56	67.51
CDY22644	Canola	plasma membrane	43.11	67.36
CDY65632	Canola	nucleus, peroxisome	10.67	66.67
KRH33894	Soybean	cytosol	60.11	65.58
Solyc01g099620.2.1	Tomato	cytosol	61.0	63.47
PGSC0003DMT400063688	Potato	cytosol	61.11	63.44
KRH68525	Soybean	cytosol	61.67	62.71
KRG96816	Soybean	cytosol	61.67	62.57
TraesCS5D01G105900.1	Wheat	cytosol	59.67	62.08
KRG92895	Soybean	extracellular, mitochondrion	61.22	61.98
VIT_14s0060g02320.t01	Wine grape	cytosol	61.56	61.97
Bra031658.1-P	Field mustard	cytosol	56.56	60.17
AT1G09090.2	Thale cress	cytosol	56.22	60.02
CDY06348	Canola	cytosol	53.78	59.31
TraesCS4D01G324800.1	Wheat	cytosol	59.22	58.06
TraesCS5D01G306400.1	Wheat	cytosol	58.56	57.47
TraesCS1D01G289300.2	Wheat	mitochondrion	45.67	51.38
TraesCS3D01G279900.1	Wheat	mitochondrion	51.44	48.94
TraesCS3D01G347900.2	Wheat	cytosol	45.78	48.64
TraesCS1D01G350600.1	Wheat	mitochondrion	51.33	47.73
TraesCS1D01G284800.1	Wheat	plastid	52.0	46.85
TraesCS1D01G285000.1	Wheat	cytosol	46.67	46.26
TraesCS6D01G164500.1	Wheat	mitochondrion, plasma membrane	48.11	45.58
TraesCS5D01G222100.1	Wheat	mitochondrion	48.44	43.86
TraesCS1D01G284900.1	Wheat	cytosol	50.33	39.05
TraesCS1D01G283600.1	Wheat	cytosol, peroxisome, plasma membrane	34.56	38.4
TraesCS2D01G393700.1	Wheat	plasma membrane	12.78	15.93
TraesCS2D01G311100.1	Wheat	plasma membrane	12.78	15.39

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016174	GO:GO:0016491	GO:GO:0050664
GO:GO:0055114	InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022
PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF57	InterPro:RBOHB	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM00054	SUPFAM:SSF47473
SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G187300	EnsemblPlants:TraesCS3D01G187300.2	TIGR:cd00051
TIGR:cd06186	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:173708233..173715635

Molecular Weight (calculated)

101443.0 Da

IEP (calculated)

9.754

GRAVY (calculated)

-0.266

Length

900 amino acids

Sequence
(BLAST)

001: MEMPDIEAGT VVTDSDSSRR PQDNTATSIP NSGNLEGSSH RATKTTRFKD DDDGVVEITL DIQRDSVSIQ DVRPVDDAGS AHSGALVSPS SSRGGKLSSK
101: LRQVTNGLKL TNPGKKVPPT PAPKTVRKRY DRSKSSAAVA LKGLQFVTAK VGNDGWTAVE KRFNHLQVDG MLLRSRFGKC IGMEGSDEFA MQMFDSLARK
201: RGMVKQVLTK EELKDFWEQL SDQGFDNRLQ TFFDMVDKNA DGRITSEEVK EIIALSASAN KLSKIKERAD EYTALIMEEL DPNNLGYIEL EDLEALLLQS
301: PSEAVARSTT THSSKLSKAL SMKLAPSNDT SPLRRHWQEF LYFVEENWKR IWVMTLWISI CIALFIWKFI QYRNRAVFHI MGYCVATAKG AAETLKFNMA
401: LVLLPVCRNT ITWIRSKTKI GAVVPFNDNI NFHKVIAAGV AVGVALHAGA HLTCDFPLLL HASDAKYEPM KPFFGDKRPP NYWWFVKGTA GWTGIVMVVL
501: MSIAFVLAQP WFRRNKLKDT NPLKKMTGFN AFWFTHHLFA IVYALLIVHG TSLYLTKEWY KKSTWMYIAY PVFLYSCERI VRLFRSHDAV KIQKVAVYPG
601: HVLALYMSKP TGFRYRSGQY IFINCRAVSP YEWHPFSITS APGDNYLSVH IRTRGDWTSR LRTVFSEACR PPAEGESGLL RADLSRGITD SNARFPKLLI
701: DGPYGAPAQD YREYDVLLLI GLGIGATPLI SIVKDVLNHI QPGGSVGGAE PGGTGKAKKR QFMTKRAYFY WVTREEGSFE WFRGVMNEVA EKDKDQVIEL
801: HNHCSSVYQE GDARSALIVM LQELQHAKKG VDILSGTSVK THFARPNWRS VFKRVAVNHE NQRVGVFYCG EPVLVPQLRQ LSADFTHKTN TKFEFHKENF

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.