Factsheet for TraesCS2D01G311100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G312600.1	Wheat	plasma membrane	96.52	96.39
TraesCS2B01G329600.1	Wheat	plasma membrane	96.12	96.12
HORVU2Hr1G077650.1	Barley	peroxisome, plastid	80.59	81.02
Zm00001d003559_P001	Maize	plasma membrane	77.51	76.18
Os04t0444800-02	Rice	plasma membrane	76.97	75.86
EES10867	Sorghum	plasma membrane	76.17	74.28
GSMUA_Achr11P...	Banana	plasma membrane	59.44	60.74
VIT_12s0035g02150.t01	Wine grape	plasma membrane	55.15	56.05
PGSC0003DMT400046925	Potato	plasma membrane	54.22	54.66
Solyc01g102610.2.1	Tomato	plastid	53.68	54.19
KRH36697	Soybean	plasma membrane	53.01	53.95
KRH11700	Soybean	plasma membrane	52.61	53.69
AT5G49740.1	Thale cress	plasma membrane	50.87	50.87
AT5G49730.1	Thale cress	plasma membrane	50.2	50.81
Bra037953.1-P	Field mustard	plasma membrane	50.2	50.68
CDY65711	Canola	plasma membrane	50.2	50.68
CDX71600	Canola	plasma membrane	50.2	50.61
TraesCS2D01G393700.1	Wheat	plasma membrane	29.59	30.61
TraesCS3D01G347900.2	Wheat	cytosol	16.73	14.76
TraesCS1D01G289300.2	Wheat	mitochondrion	15.26	14.25
TraesCS1D01G283600.1	Wheat	cytosol, peroxisome, plasma membrane	15.39	14.2
TraesCS3D01G279900.1	Wheat	mitochondrion	17.94	14.16
TraesCS1D01G350600.1	Wheat	mitochondrion	18.21	14.05
TraesCS5D01G105900.1	Wheat	cytosol	16.2	13.99
TraesCS4D01G352200.3	Wheat	cytosol	15.8	13.93
TraesCS5D01G306400.1	Wheat	cytosol	16.73	13.63
TraesCS4D01G324800.1	Wheat	cytosol	16.73	13.62
TraesCS5D01G222100.1	Wheat	mitochondrion	17.54	13.18
TraesCS6D01G164500.1	Wheat	mitochondrion, plasma membrane	16.47	12.95
TraesCS3D01G187300.2	Wheat	cytosol	15.39	12.78
TraesCS1D01G285000.1	Wheat	cytosol	15.53	12.78
TraesCS1D01G284800.1	Wheat	plastid	16.06	12.01
TraesCS1D01G284900.1	Wheat	cytosol	15.93	10.26

Protein Annotations

MapMan:25.4.2.1	MapMan:25.5.2.1	Gene3D:3.40.50.80	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom
InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:IPR017927	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF41	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS2D01G311100	EnsemblPlants:TraesCS2D01G311100.1	TIGR:cd06186	SEG:seg	:	:

Description

No Description!

Coordinates

chr2D:+:399967944..399972326

Molecular Weight (calculated)

82327.7 Da

IEP (calculated)

8.389

GRAVY (calculated)

0.448

Length

747 amino acids

Sequence
(BLAST)

001: MTQEREPLLK QNGAAGNAAA GAKGSPAVLP SLARSVLKFL MWAVFLTWAA GIFFYPTAPV QTAFRKWADI TSTEGLIAGL TGTVFLFFSG PILLIAALAY
101: VYIFAFPGDH VQKKKLRSLS FRLWTFPVLV DGPLGVVSAV EFIGIVLFVV YIVFSMTYYV VDSVSFISKA HLPPTTRSEL LLALIGLRFG SVGLFCMIFL
201: FLPVSRGSVL LRLIDIPFEH ATRYHVWLGH LTMALFTLHG LCYVISYSLL GRLIEELTQW KEVGIANLAG VISLMAGLLM WVTSLHPVRK RFFELFFYTH
301: QLYVVFVVFL VLHVGDFVFS ISAGAVFLFM LDRYLRFWQS RAKVDIVSAA CRPCGTVELV FSKPPSLRYN ALSFIFVQVR ELSFLQWHPF SVSSSPMDGR
401: YHMSILIKVL GTWTDTLKRI ITDVQEQKSR SDSESDQSQT GRITASIEGP YGHESPYHLM YENLILVAGG IGISPFLAIL SDIIHRVEQG MPCAPRNVLV
501: LWSVKKTSEL SLLLAVDAQS ISSSVCDKLH LDIQAFVTQE TDPPLEDGIV GDDQKAPGIF VKNGAAMSGL VGTGDNFWAA MYFAVSTLGS VLAFVLVQLY
601: YVKRFNVYAW WHLGLLLLLC MAAGIVLPGG LVVLLWHLSE KRRMQDDRWD VDARATADAE QTTNAAGGAD ASAASLAALR TTRYGCRPKF HAEFAAFAER
701: GGGAAVDIGV LVCGPSGLQA SVARECRSQN LRRGGAVFHF NSHSFDL

Best Arabidopsis Sequence Match ( AT5G49740.1 )
(BLAST)

001: MDDHETPLLS KDLSSSSSSS SSSSSVVVSS LKWILKVVMS VIFVTWVVFL MMYPGSLGDQ ILTNWRAISS NTLFGLTGSM FLIFSGPILV IAILASLYLI
101: ISGEETVFTK KKITKFPRFR LWTFPVLVDG PFGVVSAAEF LGIMVFSVFF LWAIYAYTLR NLNVLDYFHV LPNNRSIFLL ELTGLRFGMI GLLCMVFLFL
201: PISRGSILLR LIDIPFEHAT RYHVWLGHIT MTFFSLHGLC YVVGWTIQGQ LLELLFEWKA TGIAVLPGVI SLVAGLLMWV TSLHTVRKNY FELFFYTHQL
301: YIVFVVFLAL HVGDYLFSIV AGGIFLFILD RFLRFYQSRR TVDVISAKSL PCGTLELVLS KPPNMRYNAL SFIFLQVKEL SWLQWHPFSV SSSPLDGNHH
401: VAVLIKVLGG WTAKLRDQLS TLYEAENQDQ LISPESYPKI TTCVEGPYGH ESPYHLAYEN LVLVAGGIGI TPFFAILSDI LHRKRDGKDC LPGKVLVVWA
501: IKNSDELSLL SAIDIPSICH FFSKKLNLEI HIYVTRQSEP CLEDGMVHKV VHPSVKTPWT NGCSMSVLVG TGDNIWSGLY LIISTIGFIA MITLVDIFYI
601: NKYNITTWWY KGLLFVVCMV ASVLIFGGLV VVFWHRWEHK TGEVEANGND KVDLNGEETH NPSAAELKGL AIEEDVQNYT TIRYGTRPAF REIFESLNGK
701: WGSVDVGVIV CGPATLQTTV AKEIRSHSIW RSANHPLFHF NSHSFDL

Arabidopsis Description

FRO7Ferric reduction oxidase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q3KTM0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.