Factsheet for TraesCS1D01G285000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G295300.1	Wheat	cytosol	82.27	87.68
Os11t0537400-01	Rice	plasma membrane	2.86	59.09
TraesCS4D01G324800.1	Wheat	cytosol	58.37	57.73
TraesCS1D01G284800.1	Wheat	plastid	62.67	56.96
TraesCS5D01G306400.1	Wheat	cytosol	56.61	56.05
GSMUA_Achr6P11760_001	Banana	golgi	24.89	55.39
Zm00001d007430_P002	Maize	cytosol	49.45	54.62
TraesCS1D01G284900.1	Wheat	cytosol	69.05	54.05
GSMUA_Achr6P16270_001	Banana	cytosol	50.99	53.77
Zm00001d052653_P003	Maize	cytosol, plastid	56.39	52.73
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	48.35	52.64
GSMUA_Achr6P11770_001	Banana	cytosol	23.13	52.24
GSMUA_Achr10P...	Banana	cytosol	51.54	50.92
Zm00001d007421_P004	Maize	cytosol	51.32	49.16
TraesCS4D01G352200.3	Wheat	cytosol	45.59	48.88
Solyc06g068680.2.1	Tomato	cytosol	45.15	47.84
VIT_19s0014g02830.t01	Wine grape	cytosol	43.94	47.5
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	43.5	47.42
AT4G25090.1	Thale cress	cytosol	44.27	47.35
TraesCS5D01G105900.1	Wheat	cytosol	44.82	47.05
OQU83587	Sorghum	plastid	55.62	46.8
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	47.36	46.69
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	47.36	46.69
TraesCS3D01G187300.2	Wheat	cytosol	46.26	46.67
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	47.47	46.65
Zm00001d007426_P001	Maize	cytosol, plastid	50.88	46.43
Bra037520.1-P	Field mustard	cytosol	47.14	46.42
KRH63901	Soybean	cytosol, nucleus, plasma membrane	47.25	46.23
AT5G51060.1	Thale cress	cytosol	46.04	46.19
KRH41026	Soybean	mitochondrion	45.15	46.17
KRH59706	Soybean	cytosol	45.59	46.1
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	47.58	46.06
VIT_01s0150g00450.t01	Wine grape	cytosol	46.81	46.05
Solyc03g117980.2.1	Tomato	nucleus	47.47	45.95
Bra029194.1-P	Field mustard	cytosol	46.04	45.93
Bra009266.1-P	Field mustard	cytosol	45.48	45.79
AT5G07390.1	Thale cress	cytosol	45.37	45.68
KRH54051	Soybean	cytosol, nucleus, plasma membrane	46.92	45.27
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	41.52	45.26
TraesCS1D01G289300.2	Wheat	mitochondrion	38.55	43.75
TraesCS3D01G347900.2	Wheat	cytosol	38.55	41.32
TraesCS3D01G279900.1	Wheat	mitochondrion	41.96	40.27
TraesCS1D01G350600.1	Wheat	mitochondrion	42.18	39.57
Bra011911.1-P	Field mustard	cytosol	27.42	38.66
TraesCS6D01G164500.1	Wheat	mitochondrion, plasma membrane	40.09	38.32
TraesCS5D01G222100.1	Wheat	mitochondrion	40.86	37.32
TraesCS1D01G283600.1	Wheat	cytosol, peroxisome, plasma membrane	30.51	34.2
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	7.82	33.33
Bra013862.1-P	Field mustard	cytosol	8.48	29.73
CDY22645	Canola	cytosol	5.29	21.24
TraesCS2D01G311100.1	Wheat	plasma membrane	12.78	15.53
TraesCS2D01G393700.1	Wheat	plasma membrane	11.45	14.4

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox
PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	ScanProsite:PS00018	PFscan:PS50222
PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343
SUPFAM:SSF63380	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G285000	EnsemblPlants:TraesCS1D01G285000.1	TIGR:cd00051	TIGR:cd06186
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:383156496..383174273

Molecular Weight (calculated)

102212.0 Da

IEP (calculated)

8.920

GRAVY (calculated)

-0.244

Length

908 amino acids

Sequence
(BLAST)

001: MPSRVGADDT GGGPGVAEIV EASGGAHERA VPPGSRSAAR KTARFAEPVP APRGGGPSRL DRSMSSAPAQ ALEGLKFISE TDVSDGWTRA AGFFDSNSQN
101: DLLPRSMFGE CIGTYERGRV AGELFDTLAR RRGISGDSID KAELREFWDQ ISDPSFKSRL QLFFDMVDKN ADGRISDVEV KQIITLSASA NHLTITAQQS
201: EEYVKLIMEE LDPHGRGYIE LHSLEMLLLK PLSETMTKGG KLAEPNWHKQ LYRRARYFLK DNWRRCWVML LWLSICAGLF AWKFMQYRHR AVFKVMGYCV
301: CVAKGGPETL KFNMALTLLP VCRNTITWLR SRTTLGRFVP FNDNLNFHKM IAVGISVGAG LHIISHLTCD FPRLVHATDD EYEPMKPFFG DVKPPNYWWF
401: WKGTEGWTGL VMLTKKSKSL VESKNPNSLP GLLGRLTRSV SASHNRLTML INTSFNRFTG YNAFLYTHHL FVIVYALLIV HGHFLYLTKK WQKKTTWMYL
501: TVPIVVYACE RLTRTLRSRV RLVEKIKVAV HPHPASLLSL HMSKPEGFRF KGGQYIFIKC PDVSKFEWHP FSITSAPEDD CVSIHIKALG DWTEDLRDAF
601: LKDEDGEAGC RGTALAAVGE GGEEGRLPWP WPWPWPWELV RWKRHLKDPA WVAGAQTHLE AGLWPVPEGA DADPGHLLRV FLELFPKILI DGPYGAPAED
701: YKRYEVVLLV GLGIGATPMI SIIKDIINNT KRLPGDIESG NPGDASASTS FKTCRAYFYW TTREQGSFEW FRGIMDEVAE TDRDGIIKLH THCTSVHKEG
801: DARSAPLTIL QSLYYAKHGI DIISGSRVKT TFGRADWREA YERIAQENQG KRVGVFYCGM PTLTNELRYL AKDLSRKTST QFVPQGKLLA LPAIHPQGVS
901: LFAETMLI

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.