Factsheet for Bra013862.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34341	Canola	nucleus	97.68	97.68
CDY70539	Canola	nucleus	83.01	70.26
GSMUA_Achr10P...	Banana	nucleus, plastid	33.59	31.18
GSMUA_Achr6P11770_001	Banana	cytosol	37.45	24.13
TraesCS1A01G357100.1	Wheat	cytosol	35.14	13.98
Bra029194.1-P	Field mustard	cytosol	39.77	11.32
TraesCS5B01G299000.1	Wheat	cytosol	39.0	11.0
Solyc06g068680.2.1	Tomato	cytosol	36.29	10.97
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	35.14	10.91
TraesCS5D01G306400.1	Wheat	cytosol	38.61	10.91
TraesCS5A01G301700.1	Wheat	cytosol	38.61	10.87
HORVU0Hr1G013380.4	Barley	plastid	32.82	10.81
TraesCS4B01G327800.2	Wheat	cytosol	38.22	10.8
TraesCS4D01G324800.1	Wheat	cytosol	38.22	10.78
TraesCS5A01G499900.1	Wheat	cytosol	38.22	10.77
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	34.36	10.68
HORVU5Hr1G078630.1	Barley	cytosol	39.77	10.67
Bra011911.1-P	Field mustard	cytosol	26.25	10.56
GSMUA_Achr10P...	Banana	cytosol	37.45	10.55
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	37.45	10.53
Zm00001d052653_P003	Maize	cytosol, plastid	39.38	10.5
Bra037520.1-P	Field mustard	cytosol	37.07	10.41
GSMUA_Achr6P16270_001	Banana	cytosol	34.36	10.34
Bra009266.1-P	Field mustard	cytosol	35.91	10.31
Bra033151.1-P	Field mustard	cytosol	29.34	10.22
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	32.82	10.2
HORVU4Hr1G081670.1	Barley	cytosol	38.22	10.13
TraesCS1A01G285700.1	Wheat	cytosol	35.52	9.85
Bra031658.1-P	Field mustard	cytosol	30.89	9.46
HORVU1Hr1G072160.5	Barley	cytosol	33.98	9.41
Zm00001d007421_P004	Maize	cytosol	34.36	9.39
OQU83587	Sorghum	plastid	39.0	9.36
TraesCS1D01G284800.1	Wheat	plastid	35.52	9.21
TraesCS1B01G295300.1	Wheat	cytosol	30.12	9.15
Bra027764.1-P	Field mustard	mitochondrion	33.2	9.07
HORVU1Hr1G072140.1	Barley	cytosol	32.43	9.04
Zm00001d007430_P002	Maize	cytosol	28.57	9.0
Bra031070.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	32.05	8.65
Zm00001d007426_P001	Maize	cytosol, plastid	33.2	8.64
TraesCS1D01G285000.1	Wheat	cytosol	29.73	8.48
Bra025721.1-P	Field mustard	cytosol, nucleus, peroxisome	32.05	8.02
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	6.18	7.51
TraesCS1D01G284900.1	Wheat	cytosol	31.27	6.98
Bra020270.1-P	Field mustard	cytosol	23.55	6.9
Bra038274.1-P	Field mustard	cytosol	23.17	6.86
TraesCS1B01G295200.1	Wheat	cytosol	29.34	6.21
TraesCS1B01G295100.1	Wheat	plasma membrane	6.18	2.34
Bra023239.1-P	Field mustard	plasma membrane	6.56	2.34
Bra037953.1-P	Field mustard	plasma membrane	6.56	2.3
Bra029389.1-P	Field mustard	plasma membrane	5.79	2.15
Bra032641.1-P	Field mustard	plasma membrane	5.02	1.87
Bra009719.1-P	Field mustard	golgi, plasma membrane	3.47	1.82
Bra032640.1-P	Field mustard	plasma membrane	4.25	1.52
Bra037329.1-P	Field mustard	cytosol, peroxisome, plasma membrane	3.86	1.39
Bra033252.1-P	Field mustard	golgi, plasma membrane	3.47	1.29
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	0.39	0.22
Os11t0537400-01	Rice	plasma membrane	0.0	0.0
GSMUA_Achr10P...	Banana	plasma membrane	0.0	0.0
GSMUA_Achr6P11760_001	Banana	golgi	0.0	0.0

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EnsemblPlantsGene:Bra013862	EnsemblPlants:Bra013862.1	EnsemblPlants:Bra013862.1-P	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488
GO:GO:0005509	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0050664	GO:GO:0055114
GO:GO:0098869	InterPro:IPR002048	UniProt:M4DBK2	InterPro:NADPH_Ox	PFAM:PF08414	PFAM:PF13405
ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	SMART:SM00054	SUPFAM:SSF47473
UniParc:UPI0002546832	SEG:seg	:	:	:	:

Description

AT5G51060 (E=9e-046) RHD2, ATRBOHC, RBOHC | RHD2 (ROOT HAIR DEFECTIVE 2); NAD(P)H oxidase

Coordinates

chrA01:-:8122270..8123352

Molecular Weight (calculated)

29572.9 Da

IEP (calculated)

4.400

GRAVY (calculated)

-0.529

Length

259 amino acids

Sequence
(BLAST)

001: MERPVSFDVT DYNPEGDDWS NDLIPHRDSM SRPSSPPIHQ NPEMKVPEDA TEYVTITLDI VGNNVVVEEN AEPMVRRRQE SRKKSVVNRR TLDEPSRSKF
101: DSSEALKGFT MFISMTDAGW IAVERRFDKM TAKTGGLLDP LNFGECLGIN SKEFALGLFY TLASQRDISC EGVSKSELLE LWCQINDQCF DSRLRMFFDM
201: ADKDGDGRLS EEEVKQFIRL TASANTQSTT QNMVDKYAAM IMKELDPYDF GYIMVSYIE

Best Arabidopsis Sequence Match ( AT4G25090.1 )
(BLAST)

001: MQRVSFEVKD TEAEKSSSEI LSGSLPSTYR NPAMENVGNA VDDGSSVKNN PKLDMQKQNG LVKWFKKCLT MVSGESKAPR LDRSKSTAGQ ALKGLKIISK
101: TDGNAAWTVV EKRYLKITAN TDGLLLRSKF GECIGMNSKE FALELFDALA RKSHLKGDVI TETELKKFWE QINDKSFDSR LITFFDLMDK DSDGRLTEDE
201: VREIIKLSSS ANHLSCIQNK ADEYAAMIME ELDPDHMGYI MMESLKKLLL QAETKSVSTD INSEERKELS DMLTESLKPT RDPNHLRRWY CQLRFFVLDS
301: WQRVWVIALW LTIMAILFAY KYIQYKNRAV YEVLGPCVCL AKGAAETLKL NMALILLPVC RNTITWLRNK TRLGVFVPFD DNLNFHKVIA VGIAIGVAIH
401: SVSHLACDFP LLIAATPAEY MPLGKFFGEE QPKRYLHFVK STEGITGLVM VFLMVIAFTL AMPWFRRGKL EKKLPGPLKK LASFNAFWYT HHLFVIVYIL
501: LVLHGYYIYL NKEWYKKTTW MYLAVPVALY AYERLIRAFR SSIRTVKVLK MAAYPGKVLT LQMSKPTNFK YMSGQYMFVN CPAVSPFEWH PFSITSTPQD
601: DYLSVHIKAL GDWTEAIQGV FSEVSKPPPV GDMLNGANSP RFPKIMIDGP YGAPAQDYKK YEVVLLIGLG IGATPMISII KDIINNTETK EQLSQMEKGS
701: PQEQQGNKET FKTRRAYFYW VTKEQGTFDW FKNIMNEIAE RDKSKVIELH NHCTSVYEEG DVRSALIRML QSLNYAKNGL DIVAGTRVMS HFARPNWKNV
801: YKQIAMDHPG ANVGVFYCGA PVLTKELRQL ALEFTHKTST RFSFHKENF

Arabidopsis Description

RBOHGPutative respiratory burst oxidase homolog protein G [Source:UniProtKB/Swiss-Prot;Acc:Q9SW17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.