Factsheet for TraesCS1A01G285700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G295100.1	Wheat	plasma membrane	68.31	93.41
TraesCS1D01G284800.1	Wheat	plastid	93.68	87.59
HORVU1Hr1G072160.5	Barley	cytosol	84.69	84.6
TraesCS5A01G499900.1	Wheat	cytosol	68.42	69.53
TraesCS5A01G301700.1	Wheat	cytosol	65.1	66.09
GSMUA_Achr6P11760_001	Banana	golgi	28.37	64.95
Os11t0537400-01	Rice	plasma membrane	3.0	63.64
Zm00001d052653_P003	Maize	cytosol, plastid	65.52	63.03
GSMUA_Achr6P11770_001	Banana	cytosol	26.12	60.7
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	54.18	60.67
GSMUA_Achr6P16270_001	Banana	cytosol	55.57	60.28
GSMUA_Achr10P...	Banana	cytosol	58.24	59.19
Zm00001d007421_P004	Maize	cytosol	58.35	57.49
Zm00001d007430_P002	Maize	cytosol	50.43	57.3
OQU83587	Sorghum	plastid	64.67	55.98
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	54.07	54.83
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	54.07	54.65
Bra037520.1-P	Field mustard	cytosol	53.85	54.56
TraesCS1A01G357100.1	Wheat	cytosol	38.01	54.53
Solyc06g068680.2.1	Tomato	cytosol	49.89	54.38
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	53.32	54.07
TraesCS5A01G527600.1	Wheat	cytosol	48.82	53.84
VIT_19s0014g02830.t01	Wine grape	cytosol	48.39	53.81
KRH41026	Soybean	mitochondrion	50.96	53.6
Solyc03g117980.2.1	Tomato	nucleus	53.75	53.52
AT5G51060.1	Thale cress	cytosol	51.82	53.48
KRH63901	Soybean	cytosol, nucleus, plasma membrane	53.1	53.45
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	53.64	53.41
Bra029194.1-P	Field mustard	cytosol	52.03	53.41
Zm00001d007426_P001	Maize	cytosol, plastid	56.75	53.27
KRH59706	Soybean	cytosol	50.75	52.78
KRH54051	Soybean	cytosol, nucleus, plasma membrane	52.89	52.5
TraesCS5A01G093600.1	Wheat	cytosol	49.04	52.22
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	46.36	51.98
TraesCS3A01G182900.1	Wheat	cytosol	50.11	51.94
AT5G07390.1	Thale cress	cytosol	50.11	51.88
VIT_01s0150g00450.t01	Wine grape	cytosol	51.07	51.68
AT4G25090.1	Thale cress	cytosol	46.9	51.59
Bra009266.1-P	Field mustard	cytosol	49.04	50.78
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	44.43	49.82
TraesCS1A01G290700.2	Wheat	mitochondrion	40.36	47.12
TraesCS1A01G347700.1	Wheat	mitochondrion	47.32	45.99
TraesCS3A01G354200.2	Wheat	cytosol	41.65	45.71
TraesCS3A01G280200.1	Wheat	mitochondrion	47.22	45.18
Bra011911.1-P	Field mustard	cytosol	30.3	43.94
TraesCS6A01G180600.1	Wheat	mitochondrion	44.0	42.99
TraesCS5A01G211800.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	44.86	42.37
TraesCS1A01G284600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	31.69	37.37
Bra013862.1-P	Field mustard	cytosol	9.85	35.52
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	7.82	34.27
CDY22645	Canola	cytosol	7.71	31.86
TraesCS2A01G312600.1	Wheat	plasma membrane	13.81	17.25
TraesCS2A01G396000.1	Wheat	plasma membrane	14.03	16.88

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	InterPro:IPR002048
InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414
PRINTS:PR00466	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1A01G285700	EnsemblPlants:TraesCS1A01G285700.1
TIGR:cd00051	TIGR:cd06186	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1A:+:482794568..482815155

Molecular Weight (calculated)

104051.0 Da

IEP (calculated)

9.344

GRAVY (calculated)

-0.274

Length

934 amino acids

Sequence
(BLAST)

001: MPNRVGADSG GGGGAGEPVE ASGGVHERVL PPGKSELFAE PVSGPRGGGG GSDSDEVEIT LDMLDDSVVV RSVKPVAGGG DSAVTPEKRS SSHGHGVLRN
101: ASARFKQXXX XSRELRRIAS FNLRGGGPSR IDRSNSKPVA THALEGLKFI SGTNGSAEWT AAEGIFDKKA RNGRLPRSKF GECIGMKEAA FAGELFDALA
201: RRRNITGESI NKSELREFWD QISDTSFDSR LQTFLDMVDK NDDGRISEDE AKQIITLSVS ANKLTMVPRQ CEEYARLIME ALDPNELGYI ELYNLKMLLL
301: EAPSESTTNN HKLSKLLSQR LRPTTDPSPV RRWYKRAKHS LEDNWRRCWV MLLWLSICVG LFAWKFMQYR HHAVFGVMGY CVCVAKGGAE TLKFNMALTL
401: LPVCRNSITW LRSHTTAGRI VPFNDNLKFH MAIAVGITVG AGLHIISHLA CDFPRLLHAM DDEYEPMKPF FGDAKPPNYW WFVRGTEGWT GLVMLALMAV
501: AFTFATAPLR KGKLRLPKLK KLESLDSNPE PRELTRFAEL VNASCSRLTW LVNALLNRFT GYNVFWYTHH LFLVVYGLLI VHGHFLYLNN KWQKKSTWMY
601: LAVPMTVYAC ERLTRTLRSS VRSVKKVRVA VHPHPATLLS LHLSKPQGFR YKSGQYIYVK CPDVSPFQWH PFSITSAPGD DYVSVHIKTL GDWTNQLRNA
701: FLKVCPAPTE GTTEILRVEY NHDDVMSNPS LPKVLIDGPY GAPAQDYKEY DIVLLVGLGI GATPMISIIK DIITNARRLD GDVESGNGHA GAASPFRTRR
801: AYFYWVTREQ GSLEWFRGVM DEVAEADEQR IIELHNHCTS VYEKGDARSA LIAMLQSLHY AKNGVDVVSG SRVMTHFGRP NWAQVYQRIA DENKQKRVGV
901: FYCGEPVLTN KLRGLAKDFS SKSSTKFVFH SENF

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.