Factsheet for Zm00001d052653_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G324800.1	Wheat	cytosol	79.71	84.31
TraesCS4B01G327800.2	Wheat	cytosol	79.51	84.19
TraesCS5A01G499900.1	Wheat	cytosol	79.61	84.11
Os11t0537400-01	Rice	plasma membrane	3.71	81.82
TraesCS5B01G299000.1	Wheat	cytosol	76.72	81.15
TraesCS5D01G306400.1	Wheat	cytosol	76.62	81.13
GSMUA_Achr6P11760_001	Banana	golgi	34.09	81.13
TraesCS5A01G301700.1	Wheat	cytosol	76.72	80.98
HORVU4Hr1G081670.1	Barley	cytosol	79.61	79.12
OQU83587	Sorghum	plastid	87.85	79.05
Zm00001d007421_P004	Maize	cytosol	73.84	75.63
GSMUA_Achr6P16270_001	Banana	cytosol	65.6	73.98
GSMUA_Achr10P...	Banana	cytosol	69.72	73.67
GSMUA_Achr6P11770_001	Banana	cytosol	30.28	73.13
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	62.62	72.9
Zm00001d007430_P002	Maize	cytosol	61.38	72.51
Zm00001d007426_P001	Maize	cytosol, plastid	70.13	68.44
TraesCS1B01G295100.1	Wheat	plasma membrane	47.68	67.79
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	63.65	66.88
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	64.47	66.74
Solyc03g117980.2.1	Tomato	nucleus	63.85	66.1
HORVU1Hr1G072160.5	Barley	cytosol	63.65	66.1
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	62.51	65.91
TraesCS1A01G285700.1	Wheat	cytosol	63.03	65.52
Bra037520.1-P	Field mustard	cytosol	62.1	65.4
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	61.59	64.93
Solyc06g068680.2.1	Tomato	cytosol	55.92	63.36
VIT_01s0150g00450.t01	Wine grape	cytosol	59.94	63.06
Bra029194.1-P	Field mustard	cytosol	58.91	62.86
AT5G51060.1	Thale cress	cytosol	58.5	62.76
KRH63901	Soybean	cytosol, nucleus, plasma membrane	59.94	62.72
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	29.66	62.47
KRH54051	Soybean	cytosol, nucleus, plasma membrane	60.04	61.96
TraesCS1D01G284800.1	Wheat	plastid	63.44	61.66
TraesCS1B01G295300.1	Wheat	cytosol	54.07	61.62
VIT_19s0014g02830.t01	Wine grape	cytosol	53.24	61.55
HORVU1Hr1G072140.1	Barley	cytosol	58.7	61.36
KRH41026	Soybean	mitochondrion	55.61	60.81
TraesCS1A01G357100.1	Wheat	cytosol	40.58	60.52
KRH59706	Soybean	cytosol	55.72	60.24
Zm00001d023859_P001	Maize	plastid	55.51	59.76
AT5G07390.1	Thale cress	cytosol	55.41	59.65
Zm00001d040805_P003	Maize	cytosol	55.1	59.51
HORVU5Hr1G078630.1	Barley	cytosol	59.01	59.38
Zm00001d009248_P002	Maize	cytosol	54.69	59.2
AT4G25090.1	Thale cress	cytosol	51.49	58.89
Bra009266.1-P	Field mustard	cytosol	54.17	58.31
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	49.23	57.38
TraesCS1D01G285000.1	Wheat	cytosol	52.73	56.39
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	47.06	54.86
Zm00001d043543_P002	Maize	mitochondrion	51.39	52.92
Zm00001d038762_P001	Maize	plastid	51.29	52.53
HORVU0Hr1G013380.4	Barley	plastid	42.22	52.16
Zm00001d009349_P004	Maize	plastid	43.46	51.34
TraesCS1D01G284900.1	Wheat	cytosol	60.25	50.43
Zm00001d040974_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	43.67	50.36
Bra011911.1-P	Field mustard	cytosol	32.44	48.91
Zm00001d042961_P002	Maize	plasma membrane	43.87	48.24
Zm00001d032079_P001	Maize	mitochondrion	47.99	47.75
TraesCS1B01G295200.1	Wheat	cytosol	59.73	47.42
Zm00001d029861_P002	Maize	plastid	31.31	40.26
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	8.75	39.91
Bra013862.1-P	Field mustard	cytosol	10.5	39.38
Zm00001d020609_P001	Maize	mitochondrion	27.39	37.52
CDY22645	Canola	cytosol	8.65	37.17
Zm00001d003559_P001	Maize	plasma membrane	12.98	16.58

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	UniProt:A0A1D6QI90	ProteinID:AQK57577.1
ncoils:Coil	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8
InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869
InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030
PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972
PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix
UniParc:UPI0008456456	EnsemblPlantsGene:Zm00001d052653	EnsemblPlants:Zm00001d052653_P003	EnsemblPlants:Zm00001d052653_T003	SEG:seg	:

Description

respiratory burst oxidase4 respiratory burst oxidase4

Coordinates

chr4:+:196008355..196012956

Molecular Weight (calculated)

108854.0 Da

IEP (calculated)

9.701

GRAVY (calculated)

-0.254

Length

971 amino acids

Sequence
(BLAST)

001: MHNPRPGGGD IVEMSSSATA EGRVIPHSGP LSKKSGARKS ARFAESVSAP LSAPPPRASA NNNNNNDDDD YVEITLDVRD DSVAVHSVKP AHGGGAGAGA
101: GAGGDDPDVT LLARTLESRR SSSYGHSVIR NASSRIKQVS QELRRIASIN RRGAAGPRID RSKSAAAHAL KGLKFISKAE GAAGWEAVER RFDKLAENGL
201: LHRSKFGQCI GMKEPEFAGE LFDALSRRRN ISGDSISKAE LLEFWDQISD TSFDGRLQTF FDMVDKDADG RITEEEVKEV TPSTAFLQLV KPSPSPSPWP
301: QARTEIQITK CFFLSRPQII TLSASANKLS KITDQAEEYA RLIMEELDPG NLGYIELYNL EMLLLQAPSQ SVRIGTTNSR NLSQMLSQSL RPTAEPNPLR
401: RWYRRAQYFL EDNWRRVWVM LLWLCICAGL FAWKFIQYRQ RYVFQVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWI RNRTAGVGRV VPFDDNLNFH
501: KVVAVGIAVG AGLHIISHLT CDFPRLLHAT DAEYAPLGQY FGVPRPPNYW WFVRGTEGWT GLVMLVLMAV AFTLATPWFR RGRIALPGPL RRLTGFNAFW
601: YSHHCFVVVY ALLIVHGHYL YLTHKWYKKS TWMYLAVPMV LYACERLTRA LRSSVRPVRI LKVAVYPGNV LSLHFSKPQG FRYKSGQYIF VNCAAVSPFQ
701: WHPFSITSAP QDDYVSVHIR TLGDWTRELK NVFSRVCRPP TEGKSGLLRA EYDRDGSAVA NPSFPKVLID GPYGAPAQDY KQYDIVLLVG LGIGATPMIS
801: IIKDIINNMR QLDGGGDLEA SDASASSSSM ASFRTRRAYF YWVTREQGSF EWFRGVMDEV AETDRKGVIE LHNYCTSVYE EGDARSALIA MLQSLNHAKH
901: GVDVVSGTRV KTHFARPNWR NVYKRIALNH QNQRVGVFYC GAPVLTKELR ELAQDFSRKT NTKFEFHKEN F

Best Arabidopsis Sequence Match ( AT5G47910.1 )
(BLAST)

001: MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F

Arabidopsis Description

RBOHDRespiratory burst oxidase homolog protein D [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.