Factsheet for AT5G47910.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85316	Canola	cytosol, nucleus, plasma membrane	91.1	91.0
CDX86335	Canola	cytosol, nucleus, plasma membrane	90.66	90.56
Bra037520.1-P	Field mustard	cytosol	90.45	90.35
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	89.79	89.79
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	89.69	89.69
CDY35764	Canola	cytosol, nucleus, plasma membrane	84.91	86.99
GSMUA_Achr10P...	Banana	plasma membrane	42.24	74.66
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	72.86	72.62
GSMUA_Achr6P11760_001	Banana	golgi	32.14	72.55
Os11t0537400-01	Rice	plasma membrane	3.37	70.45
VIT_01s0150g00450.t01	Wine grape	cytosol	68.95	68.8
GSMUA_Achr6P16270_001	Banana	cytosol	62.0	66.32
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	59.07	65.23
GSMUA_Achr10P...	Banana	cytosol	64.82	64.96
GSMUA_Achr6P11770_001	Banana	cytosol	28.12	64.43
TraesCS4B01G327800.2	Wheat	cytosol	63.74	64.01
TraesCS4D01G324800.1	Wheat	cytosol	63.74	63.94
TraesCS5A01G499900.1	Wheat	cytosol	63.63	63.77
TraesCS5B01G299000.1	Wheat	cytosol	63.08	63.29
TraesCS5A01G301700.1	Wheat	cytosol	62.87	62.93
TraesCS5D01G306400.1	Wheat	cytosol	62.54	62.81
AT5G51060.1	Thale cress	cytosol	61.56	62.65
Zm00001d052653_P003	Maize	cytosol, plastid	64.93	61.59
HORVU4Hr1G081670.1	Barley	cytosol	64.06	60.39
AT5G07390.1	Thale cress	cytosol	58.52	59.76
AT1G09090.2	Thale cress	cytosol	54.18	59.19
GSMUA_Achr10P...	Banana	nucleus, plastid	17.81	58.78
AT4G25090.1	Thale cress	cytosol	54.07	58.66
TraesCS1B01G295100.1	Wheat	plasma membrane	42.89	57.83
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	28.88	57.7
Zm00001d007421_P004	Maize	cytosol	58.96	57.28
OQU83587	Sorghum	plastid	64.82	55.33
Zm00001d007430_P002	Maize	cytosol	48.86	54.74
HORVU1Hr1G072160.5	Barley	cytosol	55.48	54.65
TraesCS1A01G285700.1	Wheat	cytosol	54.07	53.32
Zm00001d007426_P001	Maize	cytosol, plastid	56.03	51.86
TraesCS1B01G295300.1	Wheat	cytosol	47.88	51.76
AT1G64060.1	Thale cress	cytosol	52.12	50.85
HORVU1Hr1G072140.1	Barley	cytosol	51.25	50.81
TraesCS1D01G284800.1	Wheat	plastid	54.29	50.05
TraesCS1A01G357100.1	Wheat	cytosol	34.2	48.39
AT4G11230.1	Thale cress	cytosol	48.86	47.82
TraesCS1D01G285000.1	Wheat	cytosol	46.69	47.36
HORVU5Hr1G078630.1	Barley	cytosol	49.29	47.05
AT1G19230.2	Thale cress	cytosol, peroxisome, plasma membrane	47.56	46.01
AT5G60010.1	Thale cress	cytosol	42.13	43.79
AT3G45810.1	Thale cress	cytosol	41.37	41.78
HORVU0Hr1G013380.4	Barley	plastid	35.29	41.35
TraesCS1D01G284900.1	Wheat	cytosol	52.01	41.29
TraesCS1B01G295200.1	Wheat	cytosol	51.25	38.59
AT5G23990.2	Thale cress	endoplasmic reticulum, plasma membrane	15.42	20.31
AT5G23980.1	Thale cress	plasma membrane	14.98	19.74
AT5G50160.1	Thale cress	plasma membrane	14.44	18.27
AT1G23020.2	Thale cress	mitochondrion, plasma membrane	13.46	17.29
AT1G01590.1	Thale cress	plasma membrane	13.14	17.19
AT5G49740.1	Thale cress	plasma membrane	13.36	16.47
AT5G49730.1	Thale cress	plasma membrane	13.14	16.4
AT1G01580.2	Thale cress	plasma membrane	13.79	15.82

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	EntrezGene:834842	ProteinID:AED95593.1
EMBL:AF055357	EMBL:AF424625	ArrayExpress:AT5G47910	EnsemblPlantsGene:AT5G47910	RefSeq:AT5G47910	TAIR:AT5G47910
RefSeq:AT5G47910-TAIR-G	EnsemblPlants:AT5G47910.1	TAIR:AT5G47910.1	ProteinID:BAB11338.1	EMBL:BT002651	InterPro:Cyt_b245_heavy_chain
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom
InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0007231
GO:GO:0008150	GO:GO:0008152	GO:GO:0008219	GO:GO:0009408	GO:GO:0009605	GO:GO:0009607
GO:GO:0009611	GO:GO:0009628	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016174
GO:GO:0016491	GO:GO:0033500	GO:GO:0043069	GO:GO:0046872	GO:GO:0050664	GO:GO:0050832
GO:GO:0055114	GO:GO:0072593	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox
RefSeq:NP_199602.1	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PO:PO:0000005
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0005052	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972
PANTHER:PTHR11972:SF94	UniProt:Q9FIJ0	Symbol:RBOHD	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343
SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI00000ABFC2	SEG:seg	:	:

Description

RBOHDRespiratory burst oxidase homolog protein D [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ0]

Coordinates

chr5:+:19397041..19402061

Molecular Weight (calculated)

103914.0 Da

IEP (calculated)

9.679

GRAVY (calculated)

-0.241

Length

921 amino acids

Sequence
(BLAST)

001: MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.