Factsheet for TraesCS1A01G357100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0537400-01	Rice	plasma membrane	3.69	54.55
GSMUA_Achr6P11760_001	Banana	golgi	30.88	49.26
TraesCS5A01G499900.1	Wheat	cytosol	62.06	43.96
TraesCS5A01G301700.1	Wheat	cytosol	58.99	41.74
Zm00001d052653_P003	Maize	cytosol, plastid	60.52	40.58
GSMUA_Achr10P...	Banana	cytosol	55.91	39.61
GSMUA_Achr6P16270_001	Banana	cytosol	52.07	39.37
GSMUA_Achr6P11770_001	Banana	cytosol	23.81	38.56
TraesCS1A01G285700.1	Wheat	cytosol	54.53	38.01
Zm00001d007421_P004	Maize	cytosol	54.84	37.66
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	47.93	37.41
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	52.53	36.46
Solyc03g117980.2.1	Tomato	nucleus	52.38	36.35
OQU83587	Sorghum	plastid	60.22	36.33
Bra011911.1-P	Field mustard	cytosol	35.79	36.18
Solyc06g068680.2.1	Tomato	cytosol	47.31	35.94
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	50.23	35.39
Bra013862.1-P	Field mustard	cytosol	13.98	35.14
KRH63901	Soybean	cytosol, nucleus, plasma membrane	49.92	35.02
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	49.46	34.96
Bra037520.1-P	Field mustard	cytosol	49.46	34.92
KRH54051	Soybean	cytosol, nucleus, plasma membrane	50.08	34.64
AT5G51060.1	Thale cress	cytosol	47.93	34.48
KRH41026	Soybean	mitochondrion	47.0	34.46
TraesCS5A01G527600.1	Wheat	cytosol	44.55	34.24
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	48.39	34.2
VIT_19s0014g02830.t01	Wine grape	cytosol	44.09	34.17
Bra029194.1-P	Field mustard	cytosol	47.31	33.85
VIT_01s0150g00450.t01	Wine grape	cytosol	47.77	33.69
KRH59706	Soybean	cytosol	46.24	33.52
Zm00001d007430_P002	Maize	cytosol	42.24	33.45
Zm00001d007426_P001	Maize	cytosol, plastid	50.84	33.27
AT4G25090.1	Thale cress	cytosol	42.09	32.27
AT5G07390.1	Thale cress	cytosol	44.7	32.26
Bra009266.1-P	Field mustard	cytosol	44.39	32.04
TraesCS3A01G182900.1	Wheat	cytosol	44.24	31.96
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	40.71	31.81
TraesCS5A01G093600.1	Wheat	cytosol	42.4	31.47
TraesCS3A01G354200.2	Wheat	cytosol	39.78	30.43
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	38.86	30.37
TraesCS1A01G290700.2	Wheat	mitochondrion	36.87	30.0
CDY22645	Canola	cytosol	10.14	29.2
TraesCS1A01G347700.1	Wheat	mitochondrion	43.01	29.14
TraesCS3A01G280200.1	Wheat	mitochondrion	42.86	28.59
TraesCS6A01G180600.1	Wheat	mitochondrion	40.86	27.82
TraesCS5A01G211800.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	41.94	27.6
TraesCS1A01G284600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	27.8	22.85
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	6.91	21.13
TraesCS2A01G396000.1	Wheat	plasma membrane	13.67	11.47
TraesCS2A01G312600.1	Wheat	plasma membrane	12.9	11.23

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0050664
GO:GO:0055114	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414
PRINTS:PR00466	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473
SUPFAM:SSF52343	SUPFAM:SSF63380	EnsemblPlantsGene:TraesCS1A01G357100	EnsemblPlants:TraesCS1A01G357100.1	TIGR:cd06186	SEG:seg

Description

No Description!

Coordinates

chr1A:+:539872187..539883831

Molecular Weight (calculated)

73342.6 Da

IEP (calculated)

6.520

GRAVY (calculated)

-0.516

Length

651 amino acids

Sequence
(BLAST)

001: MRNGEGTGGG TAGDIVEAGD ERDQGPRFVE PVSASHGLQA PRDGSDDDDD SLVEITLDLR DDDSIVVVKQ ETLAKRPPSY GHGVLRDASA RVEQAPQELR
101: RLTASSKQGQ GGAPSCVGRS MTATAHLLKF LSRVDASAGW AAVERRFDEE AKDGLLHRSK FAKCIGTKEL AFAGELFDAL ARRRHISGES ISKPELLEFW
201: DQISDRSFDG RLQIFMDMTE KDGDGRVLEE DIKEMIMLSA NANNLTMDTQ QSQKYARLMM EELDPDDLGY IQLFEVESLL LQTASRTKPT GTTLSSKLSM
301: RLHPTTAEPS PLRRWYRRAS YSLGGNWRWR ALYACERMAR PLRGSARSVA ILEVAVFPDP ASAMSMRFSK PQGFSYKSGQ YIFLKCPAVS RSQWHPFYIT
401: SAPRDEHVSV HIRAVGDWAK ELHNVFLKVC PTPTKEKSEM IRVEYDLDSS SNPSFPKVVI DGPYSAPTQD YKKYDTVLLV GTGVGAAPMI SLVKDIVNNM
501: KQPNCRDGES RTTQTCRAYF YWITREQGSF EWFRGFMDEM VETGDEGVIE LHNYYSSIYE EGDTRSALIS LLQSLNHAKH DIDMVSGARV KTHFGRPNWW
601: DVYERIALRH REQRVGVFYC GTPVLTKELS ELAHNFSRKT STKFEFYNAN F

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.