CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63901	Soybean	cytosol, nucleus, plasma membrane	94.16	95.47
GSMUA_Achr6P11760_001	Banana	golgi	33.48	77.21
KRH41026	Soybean	mitochondrion	71.73	76.01
KRH59706	Soybean	cytosol	72.48	75.95
GSMUA_Achr10P...	Banana	plasma membrane	41.23	74.47
Os11t0537400-01	Rice	plasma membrane	3.29	70.45
GSMUA_Achr6P16270_001	Banana	cytosol	60.68	66.32
VIT_19s0014g02830.t01	Wine grape	cytosol	59.19	66.31
TraesCS4B01G327800.2	Wheat	cytosol	62.81	64.45
GSMUA_Achr10P...	Banana	cytosol	62.91	64.42
KRH33894	Soybean	cytosol	56.43	64.36
TraesCS4D01G324800.1	Wheat	cytosol	62.7	64.27
TraesCS5A01G499900.1	Wheat	cytosol	62.49	63.98
TraesCS5B01G299000.1	Wheat	cytosol	62.17	63.73
TraesCS5A01G301700.1	Wheat	cytosol	62.17	63.59
TraesCS5D01G306400.1	Wheat	cytosol	61.96	63.58
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	56.22	63.43
AT5G51060.1	Thale cress	cytosol	60.89	63.31
KRG96816	Soybean	cytosol	58.98	62.57
CDY32647	Canola	cytosol, peroxisome, plasma membrane	60.36	62.42
KRH68525	Soybean	cytosol	58.66	62.37
CDY38845	Canola	cytosol, peroxisome, plasma membrane	60.26	62.31
Bra029194.1-P	Field mustard	cytosol	60.26	62.31
KRG92895	Soybean	extracellular, mitochondrion	57.92	61.3
HORVU4Hr1G081670.1	Barley	cytosol	62.81	60.49
CDX92671	Canola	cytosol	48.46	60.32
Zm00001d052653_P003	Maize	cytosol, plastid	61.96	60.04
CDX70035	Canola	cytosol	56.32	59.82
AT5G07390.1	Thale cress	cytosol	56.85	59.31
GSMUA_Achr6P11770_001	Banana	cytosol	25.19	58.96
Bra009266.1-P	Field mustard	cytosol	56.43	58.87
CDX81049	Canola	cytosol	53.56	58.81
GSMUA_Achr10P...	Banana	nucleus, plastid	17.32	58.42
CDX92674	Canola	mitochondrion	21.57	58.33
CDX98976	Canola	cytosol	56.22	58.26
CDY11053	Canola	cytosol, nucleus, plasma membrane	51.01	57.62
AT4G25090.1	Thale cress	cytosol	51.97	57.6
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	50.9	57.5
Zm00001d007421_P004	Maize	cytosol	57.6	57.17
CDX81047	Canola	cytosol	51.75	57.16
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	27.95	57.05
CDX78290	Canola	cytosol	51.43	56.67
TraesCS1B01G295100.1	Wheat	plasma membrane	41.02	56.52
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	48.57	54.86
KRH27880	Soybean	cytosol	53.77	54.58
KRH77593	Soybean	cytosol	53.77	54.58
Zm00001d007430_P002	Maize	cytosol	47.4	54.26
KRH41250	Soybean	cytosol	54.2	54.2
OQU83587	Sorghum	plastid	61.96	54.03
KRH59983	Soybean	cytosol, nucleus, plasma membrane	53.99	53.99
CDY08237	Canola	cytosol, peroxisome, plasma membrane	30.5	53.95
HORVU1Hr1G072160.5	Barley	cytosol	53.56	53.9
CDY26109	Canola	mitochondrion	33.79	53.9
CDY11054	Canola	cytosol, nucleus, plasma membrane	46.12	53.19
TraesCS1A01G285700.1	Wheat	cytosol	52.5	52.89
HORVU1Hr1G072140.1	Barley	cytosol	50.58	51.24
TraesCS1B01G295300.1	Wheat	cytosol	46.33	51.17
Zm00001d007426_P001	Maize	cytosol, plastid	54.09	51.16
TraesCS1A01G357100.1	Wheat	cytosol	34.64	50.08
CDX92675	Canola	cytosol	20.3	49.48
TraesCS1D01G284800.1	Wheat	plastid	52.5	49.45
Bra011911.1-P	Field mustard	cytosol	33.48	48.91
KRH37549	Soybean	cytosol	46.97	47.63
KRH12608	Soybean	cytosol	47.08	47.33
HORVU5Hr1G078630.1	Barley	cytosol	48.14	46.94
TraesCS1D01G285000.1	Wheat	cytosol	45.27	46.92
KRH49079	Soybean	cytosol	42.61	46.68
HORVU0Hr1G013380.4	Barley	plastid	35.71	42.75
KRH03132	Soybean	plastid	36.98	42.39
TraesCS1D01G284900.1	Wheat	cytosol	52.18	42.33
KRH56816	Soybean	plastid	36.88	42.32
TraesCS1B01G295200.1	Wheat	cytosol	51.75	39.82
KRH48086	Soybean	plasma membrane	14.56	19.08
KRH06603	Soybean	plasma membrane	14.35	18.8
KRH03224	Soybean	peroxisome	14.24	18.59
KRH35246	Soybean	plasma membrane	13.5	18.09
KRH35248	Soybean	plasma membrane	13.39	17.67
KRH36697	Soybean	plasma membrane	13.71	17.57
KRH57132	Soybean	plasma membrane	12.11	17.51
KRH00822	Soybean	plasma membrane	13.28	17.43
KRH11700	Soybean	plasma membrane	13.07	16.8

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	EntrezGene:100793600	Gene3D:2.40.30.10	EMBL:ACUP02003491	ncoils:Coil
InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd
InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	EnsemblPlantsGene:GLYMA_06G162300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869
UniProt:I1KBU7	InterPro:IPR002048	InterPro:IPR017927	EnsemblPlants:KRH54051	ProteinID:KRH54051	ProteinID:KRH54051.1
InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466
ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI000233A5E2	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:13406470..13413771

Molecular Weight (calculated)

105694.0 Da

IEP (calculated)

8.823

GRAVY (calculated)

-0.280

Length

941 amino acids

Sequence
(BLAST)

001: MVTEEVVGGD SGDSHHHHRN SDIELIATAE RAPLPHSGPL NKRRSSKLSN ASSASASASA SISAPEEQQD EGDYVEVTMD IQGGSVALHS VKTVNNDQGE
101: DEKLILLGKG MEKKRSFGAS VVRSASIRIQ QVSQELKRLA SLSKQTAPAA RVHYDRNKSA ASHALKGLKF ISIKTTDADA GWVEVERQFD ALTASTNGYL
201: HRSLFAKCIG MNKESEAFAG ELFDALSRRR GIQGDSINKA QLKDFWDQVS DQSFDSRLRT FFDMVDKDAD GRITEEEIKE IICLSATTNK LANIQKQAEE
301: YAALIMEELD PEDTGFIMVN DLEMLLLHGP THSTRGDSKY LSQMLSLKLK PIDEDNPIKR WYKSTKYFLQ DNWQRTWVLL LWIGVMLGLF AYKFVQYRRQ
401: PAYEVMGHCV CMAKGAAETL KLNMAIILLP VCRNTITWLR NKTKLGIMVP FDDNLNFHKC IAVAVTIGVG IHGIYHLACD FPRLLDASSE KYKLMEPFFG
501: DQPSSYWFFV KSWEGVTGII MVVLMAIAFT LATPWFRRGR VKLPKPLDNL TGFNAFWYSH HLFVIVYTLL IVHGIKLYLT KEWYKKTTWM YLAIPIIIYV
601: SERLTRALRS SIKPVRILKV AVYPGNVLSL HMSKPQGFRY KSGQYMFLNC AAVSPFEWHP FSITSAPGDD YLSVHIRTLG DWTRSLKVKF SECCQPPDNG
701: KSGLLRAEYL QGDRSPSALP KVLIDGPYGA PAQDYKQYEV VLLVGLGIGA TPMISILKDI VNNMKAMEEE EGSNIEEGGA SSGFGNKSPR GSSPHKKSGS
801: SNFNTRRAYF YWVTREQGSF DWFKGVMNEV AEEDHRGVIE LHNYCTSVYE EGDARSALIA MLQSLNHAKN GVDIVSGTRV KSHFAKPNWR AVYKRIAVSH
901: PRSRVGVFYC GPPALTKQLG QLASDFSHNT NTKYDFHKEN F

Best Arabidopsis Sequence Match ( AT5G47910.1 )
(BLAST)

001: MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F

Arabidopsis Description

RBOHDRespiratory burst oxidase homolog protein D [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.