CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96816	Soybean	cytosol	97.97	97.75
KRH33894	Soybean	cytosol	82.37	88.36
KRG92895	Soybean	extracellular, mitochondrion	86.55	86.16
VIT_14s0060g02320.t01	Wine grape	cytosol	79.66	78.86
PGSC0003DMT400063688	Potato	cytosol	77.06	78.66
Solyc01g099620.2.1	Tomato	cytosol	76.27	78.03
CDY22644	Canola	plasma membrane	50.06	76.91
CDY65632	Canola	nucleus, peroxisome	12.2	75.0
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	68.47	72.66
Bra031658.1-P	Field mustard	cytosol	67.12	70.21
AT1G09090.2	Thale cress	cytosol	65.99	69.28
CDY06348	Canola	cytosol	63.5	68.87
TraesCS4B01G358800.1	Wheat	cytosol	61.58	64.34
HORVU4Hr1G086500.1	Barley	cytosol	61.36	64.26
TraesCS5A01G527600.1	Wheat	cytosol	61.47	64.23
TraesCS4D01G352200.3	Wheat	cytosol	61.47	64.23
Zm00001d009248_P002	Maize	cytosol	63.05	62.21
Zm00001d040805_P003	Maize	cytosol	62.94	61.96
TraesCS3B01G212900.5	Wheat	cytosol	62.82	61.78
Os01t0360200-01	Rice	plasma membrane	63.16	61.77
TraesCS3D01G187300.2	Wheat	cytosol	62.71	61.67
TraesCS3A01G182900.1	Wheat	cytosol	62.71	61.6
OQU86843	Sorghum	cytosol	63.39	60.71
TraesCS5D01G105900.1	Wheat	cytosol	59.21	60.58
TraesCS5B01G099700.1	Wheat	cytosol	59.21	60.02
KRH41026	Soybean	mitochondrion	60.11	59.91
TraesCS5A01G093600.1	Wheat	cytosol	59.32	59.86
KRH63901	Soybean	cytosol, nucleus, plasma membrane	62.03	59.16
KRH59706	Soybean	cytosol	60.0	59.13
Zm00001d023859_P001	Maize	plastid	60.0	58.87
Os12t0541300-01	Rice	plasma membrane	60.45	58.86
KRH54051	Soybean	cytosol, nucleus, plasma membrane	62.37	58.66
EES16102	Sorghum	plastid	60.34	58.3
HORVU5Hr1G024550.3	Barley	cytosol	53.79	55.41
KRH41250	Soybean	cytosol	57.97	54.52
KRH59983	Soybean	cytosol, nucleus, plasma membrane	57.51	54.09
KRH77593	Soybean	cytosol	56.5	53.94
KRH27880	Soybean	cytosol	56.38	53.83
HORVU3Hr1G037600.3	Barley	cytosol, peroxisome, plastid	27.91	53.81
KRH37549	Soybean	cytosol	52.32	49.89
KRH12608	Soybean	cytosol	52.43	49.57
KRH49079	Soybean	cytosol	47.91	49.36
KRH03132	Soybean	plastid	40.79	43.97
KRH56816	Soybean	plastid	40.45	43.66
KRH03224	Soybean	peroxisome	15.14	18.59
KRH06603	Soybean	plasma membrane	14.69	18.11
KRH48086	Soybean	plasma membrane	14.69	18.11
KRH35246	Soybean	plasma membrane	14.35	18.09
KRH00822	Soybean	plasma membrane	14.46	17.85
KRH57132	Soybean	plasma membrane	13.11	17.82
KRH35248	Soybean	plasma membrane	14.24	17.67
KRH36697	Soybean	plasma membrane	14.01	16.89
KRH11700	Soybean	plasma membrane	13.79	16.67

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	EntrezGene:100812342	Gene3D:2.40.30.10	Gene3D:3.40.50.80	EMBL:ACUP02002119
InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd
InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	EnsemblPlantsGene:GLYMA_03G236300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869
UniProt:I1JRB1	InterPro:IPR002048	InterPro:IPR017927	EnsemblPlants:KRH68525	ProteinID:KRH68525	ProteinID:KRH68525.1
InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466
ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF125	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI000233A1B7	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:43613517..43620347

Molecular Weight (calculated)

100844.0 Da

IEP (calculated)

9.655

GRAVY (calculated)

-0.288

Length

885 amino acids

Sequence
(BLAST)

001: MEIQLEQQQE TWSETSSTGS RSTRVGFSGP MSGPLVTSNK KSSKKSARFK DQEDEDFVEI TLDVRDDTVS VQNIRGGDPE TALLASRLEK RPSSLSVRLR
101: QVSQELKRMT SSKKFDRVDR AKSGAARALK GLKFMTKNVG TEGWSQVDKR FDELAVDGKL PKTRFSQCIG MNESKEFAGE LFDALSRRRG ITSASISKDQ
201: LREFWEQITD QSFDSRLQTF FDMVDKNADG RITQEEVQEI IALSASANKL SKIQDRAEEY AALIIEELDP DNVGYIELYN LEMLLLQAPA QSTHITTDSR
301: IMSQMLSQKL VPTKDHNPIK RGFRSLAYFV EDNWKRIWVI LLWLSICAAL FTWKFIQYKH RAVFDVMGYC VTSAKGAAET LKFNMALILL PVCRNTITWL
401: RSKTKLGMAV PFDDNINFHK VIAFGIAIGV GIHAIAHLTC DFPRLLHATD EEYEPMKPFF GEDRPNNYWW FVKGTEGWTG IAIVVLMAIA YTLAQPWFRR
501: NRLKLPKPLK RLTGFNAFWY SHHLFVIVYG LFIVHGYYLY LSKKWYKKTT WMYLAIPMIL YACERLLRAF RSGYKSVKIL KVAVYPGNVL ALHMSKPQGF
601: KYSSGQYIFV NCPDVSPFQW HPFSITSAPG DDYVSVHIRT LGDWTSQLKA VFAKACQPAS GDQSGLLRAD MLQGNNIPRM PKLVIDGPYG APAQDYKNYE
701: VILLVGLGIG ATPLISILKD VLNNMKQQKD IEEGMVESGV KNKRKPFATN RAYFYWVTRE QGSFEWFKGV MDDVAEYDKD GIIELHNYCT SVYEEGDARS
801: ALITMLQSLH HAKSGVDIVS GTRVKTHFAR PNWRSVFKHT ALKHPGKRVG VFYCGAHTLV GELKRLSLDF SRKTNTKFDF HKENF

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.