Factsheet for Solyc01g099620.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063688	Potato	cytosol	97.23	97.0
KRH33894	Soybean	cytosol	76.99	80.73
KRG92895	Soybean	extracellular, mitochondrion	79.08	76.94
KRH68525	Soybean	cytosol	78.03	76.27
CDY22644	Canola	plasma membrane	50.64	76.04
KRG96816	Soybean	cytosol	77.69	75.76
VIT_14s0060g02320.t01	Wine grape	cytosol	77.57	75.06
CDY65632	Canola	nucleus, peroxisome	11.91	71.53
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	67.75	70.26
AT1G09090.2	Thale cress	cytosol	67.51	69.28
Bra031658.1-P	Field mustard	cytosol	67.75	69.27
CDY06348	Canola	cytosol	63.93	67.77
HORVU4Hr1G086500.1	Barley	cytosol	62.43	63.91
TraesCS4D01G352200.3	Wheat	cytosol	61.85	63.16
TraesCS4B01G358800.1	Wheat	cytosol	61.85	63.16
TraesCS5A01G527600.1	Wheat	cytosol	61.73	63.05
Zm00001d009248_P002	Maize	cytosol	64.62	62.32
Zm00001d040805_P003	Maize	cytosol	64.62	62.18
TraesCS5D01G105900.1	Wheat	cytosol	61.62	61.62
TraesCS3B01G212900.5	Wheat	cytosol	63.58	61.11
TraesCS3A01G182900.1	Wheat	cytosol	63.58	61.04
TraesCS3D01G187300.2	Wheat	cytosol	63.47	61.0
TraesCS5B01G099700.1	Wheat	cytosol	61.5	60.94
OQU86843	Sorghum	cytosol	64.97	60.82
TraesCS5A01G093600.1	Wheat	cytosol	61.62	60.78
Os01t0360200-01	Rice	plasma membrane	63.47	60.66
Os12t0541300-01	Rice	plasma membrane	63.47	60.4
Zm00001d023859_P001	Maize	plastid	62.77	60.2
Solyc06g068680.2.1	Tomato	cytosol	58.84	59.39
Solyc03g117980.2.1	Tomato	nucleus	64.39	59.38
EES16102	Sorghum	plastid	62.66	59.17
HORVU5Hr1G024550.3	Barley	cytosol	56.42	56.81
Solyc05g025680.1.1	Tomato	plasma membrane	37.8	52.4
HORVU3Hr1G037600.3	Barley	cytosol, peroxisome, plastid	27.75	52.29
Solyc08g081690.2.1	Tomato	cytosol	55.72	50.05
Solyc06g075570.1.1	Tomato	cytosol	47.4	49.4
Solyc07g042460.1.1	Tomato	cytosol	49.71	48.81
Solyc11g072800.1.1	Tomato	cytosol	44.74	47.43
Solyc05g025690.1.1	Tomato	mitochondrion	9.6	34.3
Solyc03g112320.2.1	Tomato	plasma membrane	12.95	20.18
Solyc01g094900.1.1	Tomato	cytosol, mitochondrion, plasma membrane, plastid	4.51	20.0
Solyc01g094890.2.1	Tomato	plasma membrane	14.8	17.95
Solyc01g102610.2.1	Tomato	plastid	14.91	17.43
Solyc01g094910.2.1	Tomato	peroxisome, plasma membrane, plastid	14.45	17.39
Solyc06g036220.1.1	Tomato	plasma membrane	7.75	15.95

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009408	GO:GO:0009628
GO:GO:0009791	GO:GO:0009845	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016174
GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927
UniProt:K4B0Z7	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414
PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF57
InterPro:RBOHB	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM00054	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380
EnsemblPlantsGene:Solyc01g099620.2	EnsemblPlants:Solyc01g099620.2.1	TMHMM:TMhelix	UniParc:UPI0002768F5D	SEG:seg	:

Description

Respiratory burst oxidase homolog protein B [Source:Projected from Arabidopsis thaliana (AT1G09090) UniProtKB/Swiss-Prot;Acc:Q9SBI0]

Coordinates

chr1:-:89802245..89806344

Molecular Weight (calculated)

98735.7 Da

IEP (calculated)

9.069

GRAVY (calculated)

-0.266

Length

865 amino acids

Sequence
(BLAST)

001: MEIENTTDSV RGSRVGFSGS LVSGKKSARF KDDESYVEIT LDVRDDSVLV QNIKGADHEA ALLASKLEKR PNHTLGSQLS FHLKQVSKEL KRMTSSNKFQ
101: KIDRSKSGAA RALRGLQFMN RNVGTEGWSE VESRFDQLAV DGMLAKTLFG QCIGMKESSE FAEELFDALA RKRCITSPAV TKDELHEFWE QITDTSFDAR
201: LQTFFDMVDK DADGRITEEE VKEIISLSAS ANKLSKIEDN SDEYAALIME ELDPGNVGYI ELYNLETLLL QAPSHSMNLS TNSRVLSQML SQKLKPTKER
301: NPFKRCKRRL DYFIEDNWKR IWVMVLWLSI CAGLFTWKFI QYKRRAVFDV MGYCVSVAKG GAETTKFNMA LVLLPVCRNT ITWLRSRTKL GKIIPFDDNI
401: NFHKVIAFGV AVGVGLHAIS HLTCDFPRLL HATDEEYEPM KPFFGDERPN NYWWFVKGTE GWTGVVMVVL MIIAYVLAQP WFRRNRLNLP STIKKLTGFN
501: AFWYSHHLFV IVYVLFIIHG YFLYLSKKWY KKTTWMYIAV PMILYACERL LRAFRSGYKA VRILKVAVYP GNVMAVHMSK PQGFKYTSGQ YIFVNCSDVS
601: SFQWHPFTIS SAPGDDYLSV HIRTLGDWTS QLKTLFSKVC EPPTGDQSGL LRADIGKADY KPRLPKLLID GPYGAPAQDY KKYDVVLLVG LGIGATPLIS
701: IVKDVLNNIN QQKDIEDGTK GSKKSPFATK RAYFYWVTRE QGSFEWFKGV MDEVSENDQE GLIELHNYCT SVYEEGDARS ALITMLQSIH QAKSGVDIVS
801: GTRVKTHFAR PNWRQVFKRV TINHPDQKIG VFYCGPQGLV GELRHLSQDF SHKTDTKFEF HKENF

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.