Factsheet for Zm00001d023859_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16102	Sorghum	plastid	92.68	91.27
TraesCS5D01G105900.1	Wheat	cytosol	79.82	83.24
TraesCS5B01G099700.1	Wheat	cytosol	79.82	82.47
TraesCS5A01G093600.1	Wheat	cytosol	79.71	81.98
Os12t0541300-01	Rice	plasma membrane	79.49	78.88
HORVU5Hr1G024550.3	Barley	cytosol	72.84	76.48
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	62.64	67.75
CDY65632	Canola	nucleus, peroxisome	10.53	65.97
KRH33894	Soybean	cytosol	58.65	64.12
CDY22644	Canola	plasma membrane	40.91	64.06
PGSC0003DMT400063688	Potato	cytosol	60.64	63.09
Solyc01g099620.2.1	Tomato	cytosol	60.2	62.77
KRG92895	Soybean	extracellular, mitochondrion	60.09	60.97
Zm00001d009248_P002	Maize	cytosol	60.53	60.87
Zm00001d040805_P003	Maize	cytosol	60.64	60.85
VIT_14s0060g02320.t01	Wine grape	cytosol	59.76	60.29
KRG96816	Soybean	cytosol	59.2	60.2
KRH68525	Soybean	cytosol	58.87	60.0
AT1G09090.2	Thale cress	cytosol	54.55	58.36
Bra031658.1-P	Field mustard	cytosol	53.99	57.56
CDY06348	Canola	cytosol	51.55	56.99
Zm00001d052653_P003	Maize	cytosol, plastid	59.76	55.51
Zm00001d007421_P004	Maize	cytosol	55.43	52.74
Zm00001d007430_P002	Maize	cytosol	47.01	51.58
Zm00001d043543_P002	Maize	mitochondrion	51.0	48.78
Zm00001d038762_P001	Maize	plastid	50.89	48.42
Zm00001d009349_P004	Maize	plastid	44.01	48.3
Zm00001d007426_P001	Maize	cytosol, plastid	52.55	47.64
Zm00001d040974_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	43.79	46.91
Zm00001d042961_P002	Maize	plasma membrane	44.23	45.19
Zm00001d032079_P001	Maize	mitochondrion	47.23	43.65
Zm00001d029861_P002	Maize	plastid	31.04	37.09
Zm00001d020609_P001	Maize	mitochondrion	27.05	34.41
Zm00001d003559_P001	Maize	plasma membrane	13.41	15.92

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	UniProt:A0A1D6IWH8	ProteinID:AQK40275.1
InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd
InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048
InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414
PFAM:PF13405	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972
PANTHER:PTHR11972:SF61	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM00054	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	UniParc:UPI00084426A9	EnsemblPlantsGene:Zm00001d023859	EnsemblPlants:Zm00001d023859_P001	EnsemblPlants:Zm00001d023859_T001	SEG:seg

Description

Respiratory burst oxidase homolog protein B

Coordinates

chr10:-:25283888..25287483

Molecular Weight (calculated)

100479.0 Da

IEP (calculated)

9.072

GRAVY (calculated)

-0.156

Length

902 amino acids

Sequence
(BLAST)

001: MNAMQDLPSI AMSSNQNESG GGGGAGPPLP TAFKSPSTDG KSGSRRSTRF KDEDEYVEVT LDVRDGGGGG DDVAVLAIKD DVRDDTQDAA SLLDRPAPGG
101: AGGGLSSKLR AARARLGRIA SGKRAAVPLS ALLRRDPDRA RLDRSVVTAL RGLQFLNQAA VTEGWPEVEK RFHRLAVDGF LLRSRFGQCI GMVGSEEFAA
201: QIFDALARRR GITAMVLTKD QVREFWEQLS DPGFDAKLQT FFDMVDKNAD GQITEEELKE VLTLTASANK LSKILERVDE YTALIMEELD PDSLGYIEIA
301: NLESLLLQPP SQAPTRLVTH SSNISQLISQ RLAPARDDGP LRRGARAVLY FAEDNWKRVW VMALWLAINA GLFTWKFLAY RRHPTFDVMG YCVCVAKGGA
401: ETTKFNMALI LLPVCRNTIT WLRSRTRLGA AVPFNDNINF HKVVAGGVAV GVALHAVTHL TCDFPRLLHA SAAAYEPMKA YFGQRRIPNY WWFVRGVEGI
501: TGVIMVVLMA VAYTLAHPWF RRGKLSEGNP LRRLSGFNMF WYSHHLFVIV YVAFVVHGVC LYINRTWYKQ TTWMYLAIPI LLYAGERLLR ALRSHGLTTV
601: RIEKVALYPG NVIAIHMSKP HGFSYKSGQY IYVNCGEVSP FEWHPFTITS APGDDYLSMH IRCRGDWTAS FRALFAQVCR PPAAGQSGLL RADFASSTAA
701: GGGGKLPKLL IDGPYGAPAQ DYRKYDVLLL IGLGIGATPL ISIVKDVLNN ISDNKDEEQP AEFMTRRVYF YWCTREEGSF EWFRGVMNEV AERDARGDVV
801: ELHNHCTSVY EEGDARSALL VMLQALHHAK SGVDVVSGTR VRTHFARPNW RDVFKRVACN HQGQRVGVFY CGDQKVTPEL RRLSQDFSHK TTTKFVFHKE
901: NF

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.